Cow genome map


           Conread name:
           Ss1.1-reru18c_f21.5.5
        

               Conread position:
               1-120
               

               Cow position:
               chr5:43637445-43637326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-308
               

               Cow position:
               chr5:43635130-43634941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               388-528
               

               Cow position:
               chr5:43631810-43631671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               127
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               509-584
               

               Cow position:
               chr5:43629152-43629077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               73
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               683-1172
               

               Cow position:
               chr5:46404707-46405201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 246
               

               Conread position:
               1309-1518
               

               Cow position:
               chr5:46405419-46405635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 33
               
Show alignments to all cow chromosomes.