Cow genome map
| Conread name: | Ss1.1-reru30c_b3.5 |
| Conread position: | 3-606 |
| Cow position: | chr11:67435070-67435675 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 389 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 311-587 |
| Cow position: | chr11:30255728-30255444 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 147 |
| Conread position: | 311-587 |
| Cow position: | chr11:63860354-63860636 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 311-600 |
| Cow position: | chr11:5260896-5261189 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 312-586 |
| Cow position: | chr11:7719226-7719507 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 312-587 |
| Cow position: | chr11:26550765-26550482 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 313-587 |
| Cow position: | chr11:17549446-17549165 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr11:20730935-20731215 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr11:46142701-46142979 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-599 |
| Cow position: | chr11:18544898-18545189 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 313-599 |
| Cow position: | chr11:18562977-18563267 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 313-603 |
| Cow position: | chr11:82419478-82419188 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 320-601 |
| Cow position: | chr11:4453069-4453351 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 320-601 |
| Cow position: | chr11:66258797-66258517 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 321-587 |
| Cow position: | chr11:40772793-40773063 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 321-603 |
| Cow position: | chr11:79484871-79485155 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 322-602 |
| Cow position: | chr11:26444389-26444659 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 322-603 |
| Cow position: | chr11:9576014-9576291 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 322-603 |
| Cow position: | chr11:18437088-18437369 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 326-574 |
| Cow position: | chr11:44529325-44529083 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 326-601 |
| Cow position: | chr11:13992808-13992532 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 333-585 |
| Cow position: | chr11:15691901-15692155 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 358-602 |
| Cow position: | chr11:37945613-37945377 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 43 |
Show alignments to all cow chromosomes.