Cow genome map


           Conread name:
           Ss1.1-reru30c_b3.5
        

               Conread position:
               311-531
               

               Cow position:
               chr17:19341926-19342154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               6, 148
               

               Conread position:
               312-584
               

               Cow position:
               chr17:9229818-9230087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               313-525
               

               Cow position:
               chr17:18315439-18315226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               313-550
               

               Cow position:
               chr17:13910168-13910415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 146
               

               Conread position:
               313-559
               

               Cow position:
               chr17:16667372-16667623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               313-587
               

               Cow position:
               chr17:1970600-1970319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               313-587
               

               Cow position:
               chr17:16904028-16903747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 143
               

               Conread position:
               313-603
               

               Cow position:
               chr17:18265027-18265322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               320-603
               

               Cow position:
               chr17:31949103-31949396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               322-603
               

               Cow position:
               chr17:29822988-29822704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 137
               
Show alignments to all cow chromosomes.