Cow genome map
| Conread name: | Ss1.1-reru30c_b3.5 |
| Conread position: | 3-224 |
| Cow position: | chr19:5630385-5630613 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 3-224 |
| Cow position: | chr19:17732707-17732477 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 299-601 |
| Cow position: | chr19:11195724-11196024 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 300-603 |
| Cow position: | chr19:41213849-41214154 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 308-604 |
| Cow position: | chr19:8828823-8828530 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 311-525 |
| Cow position: | chr19:20392461-20392247 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 311-587 |
| Cow position: | chr19:20612014-20611731 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 312-587 |
| Cow position: | chr19:12652554-12652272 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 313-587 |
| Cow position: | chr19:2269626-2269904 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr19:26518658-26518934 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-593 |
| Cow position: | chr19:5940101-5940363 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 314-601 |
| Cow position: | chr19:42779253-42778968 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 319-601 |
| Cow position: | chr19:40246583-40246872 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 139 |
| Conread position: | 320-527 |
| Cow position: | chr19:17732280-17732069 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 139 |
| Conread position: | 320-590 |
| Cow position: | chr19:33350863-33351137 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 320-603 |
| Cow position: | chr19:23257140-23256852 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 137 |
| Conread position: | 321-585 |
| Cow position: | chr19:54542323-54542594 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 137 |
| Conread position: | 321-587 |
| Cow position: | chr19:30237374-30237107 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 322-603 |
| Cow position: | chr19:48394148-48393857 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 324-561 |
| Cow position: | chr19:28980128-28979890 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 325-603 |
| Cow position: | chr19:21211106-21211386 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 128 |
| Conread position: | 328-603 |
| Cow position: | chr19:47096057-47095786 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 333-603 |
| Cow position: | chr19:6583410-6583134 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 129 |
Show alignments to all cow chromosomes.