Cow genome map
| Conread name: | Ss1.1-reru30c_b3.5 |
| Conread position: | 15-301 |
| Cow position: | chr27:21259647-21259944 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 311-602 |
| Cow position: | chr27:12554972-12555258 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 311-603 |
| Cow position: | chr27:18189957-18189656 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 312-582 |
| Cow position: | chr27:9333240-9332963 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 312-586 |
| Cow position: | chr27:5990482-5990755 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 219, 114 |
| Conread position: | 313-587 |
| Cow position: | chr27:344358-344639 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:3653128-3653409 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:11481503-11481222 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:12006720-12006439 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:16030825-16031106 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:19523138-19523418 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:22797087-22797368 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chr27:29035810-29036091 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-590 |
| Cow position: | chr27:29811873-29811592 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 313-592 |
| Cow position: | chr27:23906655-23906372 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 320-561 |
| Cow position: | chr27:19731266-19731508 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 320-601 |
| Cow position: | chr27:14999329-14999612 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 321-586 |
| Cow position: | chr27:27152226-27151958 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 321-587 |
| Cow position: | chr27:12239631-12239359 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 336-603 |
| Cow position: | chr27:16037418-16037691 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 358-602 |
| Cow position: | chr27:22586352-22586106 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 360-577 |
| Cow position: | chr27:816243-816462 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 409-591 |
| Cow position: | chr27:21261487-21261669 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 51 |
Show alignments to all cow chromosomes.