Cow genome map


           Conread name:
           Ss1.1-reru30c_b3.5
        

               Conread position:
               309-580
               

               Cow position:
               chr29:20642072-20641798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               311-593
               

               Cow position:
               chr29:26016854-26016573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               312-587
               

               Cow position:
               chr29:10820125-10820407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 144
               

               Conread position:
               313-586
               

               Cow position:
               chr29:1743088-1742813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               313-587
               

               Cow position:
               chr29:32942234-32941953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               320-596
               

               Cow position:
               chr29:12575706-12575424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               320-602
               

               Cow position:
               chr29:5311176-5311461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               320-603
               

               Cow position:
               chr29:22634475-22634185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               321-506
               

               Cow position:
               chr29:19400186-19399998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               321-587
               

               Cow position:
               chr29:14313568-14313841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 243
               

               Conread position:
               341-603
               

               Cow position:
               chr29:3198877-3199145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               362-602
               

               Cow position:
               chr29:3691972-3691739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 23
               
Show alignments to all cow chromosomes.