Cow genome map
| Conread name: | Ss1.1-reru30c_b3.5 |
| Conread position: | 300-587 |
| Cow position: | chrX:10059861-10059568 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 310-587 |
| Cow position: | chrX:11112243-11112521 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 310-593 |
| Cow position: | chrX:15340467-15340760 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 150 |
| Conread position: | 311-587 |
| Cow position: | chrX:31496122-31495840 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 311-606 |
| Cow position: | chrX:31372848-31372546 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 312-529 |
| Cow position: | chrX:30143899-30144121 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 312-587 |
| Cow position: | chrX:32584546-32584828 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 312-601 |
| Cow position: | chrX:21728789-21729064 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 313-540 |
| Cow position: | chrX:27408078-27408309 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chrX:2160149-2159868 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 313-587 |
| Cow position: | chrX:7096842-7096562 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 313-587 |
| Cow position: | chrX:19109657-19109938 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 313-587 |
| Cow position: | chrX:20020961-20020682 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 143 |
| Conread position: | 313-592 |
| Cow position: | chrX:17097898-17098186 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 313-595 |
| Cow position: | chrX:18598829-18599112 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 313-601 |
| Cow position: | chrX:12102581-12102873 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 144 |
| Conread position: | 313-602 |
| Cow position: | chrX:31933517-31933811 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 313-603 |
| Cow position: | chrX:3952236-3951952 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 313-603 |
| Cow position: | chrX:25280437-25280736 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 313-607 |
| Cow position: | chrX:16325145-16325444 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 320-587 |
| Cow position: | chrX:20953910-20953636 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 320-587 |
| Cow position: | chrX:39713928-39713654 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 321-586 |
| Cow position: | chrX:44491058-44491327 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 137 |
| Conread position: | 323-603 |
| Cow position: | chrX:11522345-11522067 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 325-553 |
| Cow position: | chrX:34191266-34191498 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 325-599 |
| Cow position: | chrX:3245795-3246069 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 326-603 |
| Cow position: | chrX:1430404-1430121 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 358-602 |
| Cow position: | chrX:23415961-23416210 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 48 |
Show alignments to all cow chromosomes.