Cow genome map
| Conread name: | Ss1.1-rese11c_n5.5 |
| Conread position: | 1-601 |
| Cow position: | chr13:24162698-24163297 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 1-617 |
| Cow position: | chr13:24162614-24163229 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 3-573 |
| Cow position: | chr13:39930608-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 3-614 |
| Cow position: | chr13:22125225-22125836 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 3-614 |
| Cow position: | chr13:24162951-24163562 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 3-617 |
| Cow position: | chr13:22124889-22125503 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 3-631 |
| Cow position: | chr13:22125141-22125769 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 3-631 |
| Cow position: | chr13:24162867-24163495 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 7-602 |
| Cow position: | chr13:22124725-22125320 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 12-602 |
| Cow position: | chr13:24162456-24163046 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 12-617 |
| Cow position: | chr13:22124982-22125587 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 13-589 |
| Cow position: | chr13:24162793-24163369 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 14-438 |
| Cow position: | chr13:24163211-24163638 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 21-614 |
| Cow position: | chr13:24162549-24163142 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 239 |
| Conread position: | 25-586 |
| Cow position: | chr13:39984303-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 42-533 |
| Cow position: | chr13:39984403-39984894 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 148, 129 |
| Conread position: | 42-585 |
| Cow position: | chr13:39984235-39984778 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 147 |
| Conread position: | 42-602 |
| Cow position: | chr13:24163074-24163634 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 403 |
| Conread position: | 42-606 |
| Cow position: | chr13:22125348-22125912 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 417, 403 |
| Conread position: | 42-614 |
| Cow position: | chr13:22124844-22125416 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 218 |
| Conread position: | 54-617 |
| Cow position: | chr13:39930575-39931138 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 213 |
| Conread position: | 56-589 |
| Cow position: | chr13:22125110-22125643 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 64-631 |
| Cow position: | chr13:22124698-22125265 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 203 |
| Conread position: | 64-631 |
| Cow position: | chr13:24162424-24162991 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 203 |
| Conread position: | 66-585 |
| Cow position: | chr13:39984007-39984526 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 498, 505 |
| Conread position: | 117-601 |
| Cow position: | chr13:39983974-39984458 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 245, 250 |
| Conread position: | 137-617 |
| Cow position: | chr13:22124687-22125167 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 337 |
| Conread position: | 137-617 |
| Cow position: | chr13:24162413-24162893 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 337 |
| Conread position: | 225-631 |
| Cow position: | chr13:22124691-22125097 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-631 |
| Cow position: | chr13:24162417-24162823 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 204 |
| Conread position: | 305-617 |
| Cow position: | chr13:39930574-39930886 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.