Cow genome map
| Conread name: | Ss1.1-rese11c_n5.5 |
| Conread position: | 1-591 |
| Cow position: | chr2:5875137-5874548 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 1-601 |
| Cow position: | chr2:82799654-82800254 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 3-595 |
| Cow position: | chr2:82799824-82800416 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 11-541 |
| Cow position: | chr2:82799916-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 385 |
| Conread position: | 11-602 |
| Cow position: | chr2:82799412-82800003 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 12-606 |
| Cow position: | chr2:5874707-5874113 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 367 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 12-617 |
| Cow position: | chr2:5874875-5874270 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 376 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 20-459 |
| Cow position: | chr2:82800009-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-602 |
| Cow position: | chr2:78754814-78755392 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 12 |
| Conread position: | 25-342 |
| Cow position: | chr2:48689389-48689073 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 161, 9 |
| Conread position: | 26-586 |
| Cow position: | chr2:86465586-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 32-471 |
| Cow position: | chr2:86465761-86466200 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 32-595 |
| Cow position: | chr2:82799517-82800080 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 235 |
| Conread position: | 33-611 |
| Cow position: | chr2:86465510-86466088 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 357 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 33-617 |
| Cow position: | chr2:5874770-5874186 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 37-617 |
| Cow position: | chr2:5875018-5874438 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 395 |
| Conread position: | 39-577 |
| Cow position: | chr2:78754177-78754711 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 27 |
| Conread position: | 42-552 |
| Cow position: | chr2:48689540-48689031 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 127 |
| Conread position: | 42-601 |
| Cow position: | chr2:86465267-86465826 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-614 |
| Cow position: | chr2:82799611-82800183 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-641 |
| Cow position: | chr2:82799779-82800381 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 43-585 |
| Cow position: | chr2:86465688-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 43-617 |
| Cow position: | chr2:5875180-5874606 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 64-553 |
| Cow position: | chr2:5874907-5874418 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 68-592 |
| Cow position: | chr2:48689595-48689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 95-623 |
| Cow position: | chr2:82799412-82799940 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 430 |
| Conread position: | 139-623 |
| Cow position: | chr2:86465112-86465596 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 300-623 |
| Cow position: | chr2:48689535-48689212 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 315-631 |
| Cow position: | chr2:5875160-5874844 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 249, 255 |
| Conread position: | 379-623 |
| Cow position: | chr2:5875180-5874936 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 228, 219 |
Show alignments to all cow chromosomes.