Cow genome map
| Conread name: | Ss1.1-rese11c_n5.5 |
| Conread position: | 3-371 |
| Cow position: | chr21:12608296-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 3-382 |
| Cow position: | chr21:34222922-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 180 |
| Conread position: | 3-591 |
| Cow position: | chr21:12608548-12607960 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 3-617 |
| Cow position: | chr21:12608884-12608270 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 264 |
| Conread position: | 3-623 |
| Cow position: | chr21:12608716-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 3-623 |
| Cow position: | chr21:12659046-12659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 3-631 |
| Cow position: | chr21:12659382-12660010 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 3-648 |
| Cow position: | chr21:12608800-12608153 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 5-623 |
| Cow position: | chr21:12659300-12659918 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 6-624 |
| Cow position: | chr21:12659217-12659835 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 91 |
| Conread position: | 12-476 |
| Cow position: | chr21:34222997-34222532 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 12-624 |
| Cow position: | chr21:12658887-12659499 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 14-617 |
| Cow position: | chr21:12659138-12659744 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 256 |
| Conread position: | 21-644 |
| Cow position: | chr21:12608614-12607989 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 597, 0 |
| Conread position: | 27-595 |
| Cow position: | chr21:12608941-12608376 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 23 |
| Conread position: | 29-550 |
| Cow position: | chr21:34223064-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 320 |
| Conread position: | 42-576 |
| Cow position: | chr21:12659505-12660042 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 42-614 |
| Cow position: | chr21:12659001-12659573 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-617 |
| Cow position: | chr21:12658833-12659408 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 138 |
| Conread position: | 101-623 |
| Cow position: | chr21:34223076-34222554 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 166 |
| Conread position: | 117-433 |
| Cow position: | chr21:12608266-12607950 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 154, 150 |
| Conread position: | 123-623 |
| Cow position: | chr21:12658830-12659330 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-623 |
| Cow position: | chr21:12608914-12608432 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 272 |
| Conread position: | 224-623 |
| Cow position: | chr21:12608915-12608516 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 272-617 |
| Cow position: | chr21:12658811-12659156 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-622 |
| Cow position: | chr21:12658811-12659077 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.