Cow genome map

Conread name: Ss1.1-rese11c_n5.5

Conread position: 1-287
Cow position:
Alignm length: 288
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 25

Conread position: 1-539
Cow position:
Alignm length: 543
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 255, 272

Conread position: 2-494
Cow position:
Alignm length: 496
Alignm identity: 297
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 116, 80

Conread position: 2-550
Cow position:
Alignm length: 550
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 30

Conread position: 3-288
Cow position:
Alignm length: 288
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 23

Conread position: 3-371
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 29

Conread position: 3-385
Cow position:
Alignm length: 385
Alignm identity: 246
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 28

Conread position: 3-541
Cow position:
Alignm length: 541
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 3-590
Cow position:
Alignm length: 593
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 32

Conread position: 3-595
Cow position:
Alignm length: 594
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 240

Conread position: 3-595
Cow position:
Alignm length: 597
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 3-614
Cow position:
Alignm length: 617
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 4-539
Cow position:
Alignm length: 537
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 439

Conread position: 6-595
Cow position:
Alignm length: 594
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 100

Conread position: 6-595
Cow position:
Alignm length: 592
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 136

Conread position: 7-344
Cow position:
Alignm length: 339
Alignm identity: 204
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 281, 293

Conread position: 7-614
Cow position:
Alignm length: 608
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 16-623
Cow position:
Alignm length: 609
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 18

Conread position: 21-593
Cow position:
Alignm length: 577
Alignm identity: 343
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 5, 15

Conread position: 25-351
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 6, 0

Conread position: 25-478
Cow position:
Alignm length: 455
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 6

Conread position: 25-585
Cow position:
Alignm length: 562
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 6

Conread position: 29-602
Cow position:
Alignm length: 576
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 31-623
Cow position:
Alignm length: 597
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 32-555
Cow position:
Alignm length: 526
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 55

Conread position: 35-622
Cow position:
Alignm length: 591
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 148

Conread position: 37-433
Cow position:
Alignm length: 398
Alignm identity: 251
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 210, 5

Conread position: 37-623
Cow position:
Alignm length: 588
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 177

Conread position: 42-459
Cow position:
Alignm length: 420
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 66

Conread position: 42-473
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 200

Conread position: 42-644
Cow position:
Alignm length: 605
Alignm identity: 363
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 577, 19

Conread position: 51-350
Cow position:
Alignm length: 303
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 43

Conread position: 51-541
Cow position:
Alignm length: 491
Alignm identity: 304
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 39, 0

Conread position: 52-595
Cow position:
Alignm length: 548
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 288

Conread position: 52-644
Cow position:
Alignm length: 595
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 573, 0

Conread position: 54-622
Cow position:
Alignm length: 573
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 57-454
Cow position:
Alignm length: 399
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 86-602
Cow position:
Alignm length: 523
Alignm identity: 315
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 80

Conread position: 91-556
Cow position:
Alignm length: 467
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 434

Conread position: 116-623
Cow position:
Alignm length: 510
Alignm identity: 310
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 67, 75

Conread position: 121-539
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 311

Conread position: 135-505
Cow position:
Alignm length: 373
Alignm identity: 226
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 347, 0

Conread position: 150-647
Cow position:
Alignm length: 500
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 0

Conread position: 189-595
Cow position:
Alignm length: 411
Alignm identity: 257
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 53

Conread position: 218-589
Cow position:
Alignm length: 374
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 343, 0

Conread position: 225-623
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 126

Conread position: 231-628
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-623
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 287-601
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 289-603
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 302-584
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 307-613
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 33

Conread position: 334-623
Cow position:
Alignm length: 291
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 90

Conread position: 371-614
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 371-623
Cow position:
Alignm length: 253
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.