Cow genome map
| Conread name: | Ss1.1-rese11c_n5.5 |
| Conread position: | 2-506 |
| Cow position: | chr24:17035494-17034990 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 310 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 2-587 |
| Cow position: | chr24:17035662-17035077 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 3-349 |
| Cow position: | chr24:17070672-17071018 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 3-548 |
| Cow position: | chr24:17078048-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 240 |
| Conread position: | 3-586 |
| Cow position: | chr24:17036417-17035834 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-595 |
| Cow position: | chr24:17036501-17035909 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 3-595 |
| Cow position: | chr24:17078216-17077624 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 240 |
| Conread position: | 3-601 |
| Cow position: | chr24:17036333-17035735 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 3-623 |
| Cow position: | chr24:17035913-17035293 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 3-623 |
| Cow position: | chr24:17036081-17035461 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 11-623 |
| Cow position: | chr24:17078124-17077512 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 21-613 |
| Cow position: | chr24:17078282-17077690 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 22-602 |
| Cow position: | chr24:17070440-17071019 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 15 |
| Conread position: | 25-400 |
| Cow position: | chr24:17013148-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 25-623 |
| Cow position: | chr24:17036226-17035629 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 6 |
| Conread position: | 26-601 |
| Cow position: | chr24:17036141-17035567 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 5 |
| Conread position: | 26-644 |
| Cow position: | chr24:17035721-17035102 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 8 |
| Conread position: | 28-614 |
| Cow position: | chr24:17078359-17077773 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-601 |
| Cow position: | chr24:17035969-17035399 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 138 |
| Conread position: | 42-563 |
| Cow position: | chr24:17035538-17035017 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 116 |
| Conread position: | 42-622 |
| Cow position: | chr24:17035790-17035210 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-644 |
| Cow position: | chr24:17036546-17035942 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 516, 520 |
| Conread position: | 54-623 |
| Cow position: | chr24:17036615-17036049 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 106-616 |
| Cow position: | chr24:17078365-17077855 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 127-433 |
| Cow position: | chr24:17013165-17013471 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 116 |
| Conread position: | 150-623 |
| Cow position: | chr24:17070483-17070956 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-550 |
| Cow position: | chr24:17013185-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-595 |
| Cow position: | chr24:17070408-17070760 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 304-511 |
| Cow position: | chr24:16986440-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 309-616 |
| Cow position: | chr24:17013179-17013486 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 127, 132 |
| Conread position: | 399-622 |
| Cow position: | chr24:17013185-17013408 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.