Cow genome map
| Conread name: | Ss1.1-rese11c_n5.5 |
| Conread position: | 4-511 |
| Cow position: | chr3:68045815-68046322 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 12-614 |
| Cow position: | chr3:62722271-62721669 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 15-553 |
| Cow position: | chr3:62742504-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 16-428 |
| Cow position: | chr3:62722014-62721603 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 17-499 |
| Cow position: | chr3:20194781-20195263 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 18-592 |
| Cow position: | chr3:68045578-68046151 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 21-587 |
| Cow position: | chr3:68045748-68046314 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 25-587 |
| Cow position: | chr3:68027160-68027721 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 6 |
| Conread position: | 25-589 |
| Cow position: | chr3:68027076-68027639 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 333 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 155, 17 |
| Conread position: | 25-641 |
| Cow position: | chr3:68045669-68046287 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 370 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 222, 9 |
| Conread position: | 31-548 |
| Cow position: | chr3:62722084-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 321 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 146 |
| Conread position: | 42-419 |
| Cow position: | chr3:20194890-20195267 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 42-631 |
| Cow position: | chr3:62722157-62721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 394 |
| Conread position: | 44-595 |
| Cow position: | chr3:62722323-62721772 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 57-587 |
| Cow position: | chr3:20194737-20195267 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 66-586 |
| Cow position: | chr3:77351215-77350704 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 239, 34 |
| Conread position: | 66-622 |
| Cow position: | chr3:68027032-68027588 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 335 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 105-586 |
| Cow position: | chr3:62742258-62742735 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 126-378 |
| Cow position: | chr3:20194446-20194698 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-623 |
| Cow position: | chr3:20194744-20195219 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 377 |
| Conread position: | 201-511 |
| Cow position: | chr3:68027419-68027729 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-444 |
| Cow position: | chr3:20194446-20194680 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 215-616 |
| Cow position: | chr3:20194727-20195128 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 394 |
| Conread position: | 292-543 |
| Cow position: | chr3:20194444-20194695 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-601 |
| Cow position: | chr3:62722323-62722018 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-623 |
| Cow position: | chr3:20194726-20195051 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-623 |
| Cow position: | chr3:20194441-20194691 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.