Cow genome map


           Conread name:
           Ss1.1-rese11c_n5.5
        

               Conread position:
               3-614
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               3-623
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-623
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-623
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               5-623
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               559, 564
               

               Conread position:
               6-240
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-623
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 176
               

               Conread position:
               12-608
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               12-623
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 329
               

               Conread position:
               18-644
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               607, 12
               

               Conread position:
               20-496
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 6
               

               Conread position:
               20-592
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               25-595
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               25-599
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               572, 9
               

               Conread position:
               25-614
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 9
               

               Conread position:
               26-592
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               26-592
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 8
               

               Conread position:
               26-601
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               28-623
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               354
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               29-623
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-549
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 0
               

               Conread position:
               30-580
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               522, 539
               

               Conread position:
               30-623
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               359
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               31-623
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 221
               

               Conread position:
               31-648
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 227
               

               Conread position:
               42-623
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               443, 432
               

               Conread position:
               44-623
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               49-623
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               356
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               216, 205
               

               Conread position:
               65-623
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               377, 370
               

               Conread position:
               86-614
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               305, 61
               

               Conread position:
               108-623
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               126-644
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 316
               

               Conread position:
               201-601
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               336-594
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 21
               
Show alignments to all cow chromosomes.