Cow genome map

Conread name: Ss1.1-rese11c_n5.5

Conread position: 1-538
Cow position: chr8:48406831-48406294 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 31

Conread position: 1-589
Cow position: chr8:46816088-46816676 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-591
Cow position: chr8:46816509-46817098 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 1-614
Cow position: chr8:46816257-46816869 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 5

Conread position: 1-702
Cow position: chr8:46816593-46817293 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 5

Conread position: 3-501
Cow position: chr8:46816846-46817344 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 109

Conread position: 3-583
Cow position: chr8:46816426-46817006 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 529

Conread position: 3-595
Cow position: chr8:48407417-48406825 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 6-613
Cow position: chr8:46816009-46816616 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 161

Conread position: 6-644
Cow position: chr8:45201234-45201874 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 236

Conread position: 7-615
Cow position: chr8:46816346-46816954 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 195

Conread position: 11-631
Cow position: chr8:46815927-46816552 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 375
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 15-614
Cow position: chr8:48406900-48406302 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 365
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 140, 19

Conread position: 16-601
Cow position: chr8:45200993-45201577 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 26

Conread position: 25-584
Cow position: chr8:55580890-55581448 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 25-591
Cow position: chr8:45201170-45201735 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 342
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 331, 9

Conread position: 25-601
Cow position: chr8:45201086-45201661 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 9

Conread position: 25-601
Cow position: chr8:48407478-48406903 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 349
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 224, 9

Conread position: 25-614
Cow position: chr8:46816701-46817289 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 9

Conread position: 25-615
Cow position: chr8:46816197-46816786 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 26-405
Cow position: chr8:48406637-48406259 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 233
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 5

Conread position: 26-544
Cow position: chr8:45201423-45201940 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 322
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 8

Conread position: 28-583
Cow position: chr8:46816787-46817342 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 343
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 44

Conread position: 30-622
Cow position: chr8:48407558-48406966 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 34-586
Cow position: chr8:48407638-48407086 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 401

Conread position: 37-556
Cow position: chr8:48407299-48406780 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 231

Conread position: 41-473
Cow position: chr8:48407211-48406779 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 275
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 144, 150

Conread position: 42-585
Cow position: chr8:55581158-55581701 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 216

Conread position: 42-644
Cow position: chr8:55580990-55581594 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 581, 0

Conread position: 44-599
Cow position: chr8:45200936-45201492 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 334
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 205, 199

Conread position: 53-589
Cow position: chr8:55580833-55581369 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 130

Conread position: 138-623
Cow position: chr8:55580834-55581319 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 304
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 136, 129

Conread position: 306-644
Cow position: chr8:48407618-48407278 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 217
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 28

Show alignments to all cow chromosomes.