Cow genome map

Conread name: Ss1.1-rese11c_n5.5

Conread position: 1-473
Cow position: chrX:29045133-29044661 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 291
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 34

Conread position: 1-601
Cow position: chrX:25324871-25324272 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 1-602
Cow position: chrX:25325292-25324691 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 3-614
Cow position: chrX:25325458-25324847 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 3-614
Cow position: chrX:25325542-25324931 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 250

Conread position: 4-598
Cow position: chrX:13826734-13826143 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 5-623
Cow position: chrX:13826901-13826283 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 96

Conread position: 7-614
Cow position: chrX:25325034-25324427 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 7-641
Cow position: chrX:25325791-25325153 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 86

Conread position: 18-622
Cow position: chrX:25325359-25324755 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 333

Conread position: 25-550
Cow position: chrX:25324763-25324239 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 310
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 249, 6

Conread position: 25-586
Cow position: chrX:25309790-25310350 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 347
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 147, 6

Conread position: 25-603
Cow position: chrX:25325183-25324606 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 9

Conread position: 26-387
Cow position: chrX:25310211-25310571 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 220
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 224, 8

Conread position: 26-466
Cow position: chrX:25324678-25324239 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 274
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 164, 8

Conread position: 26-644
Cow position: chrX:25325098-25324479 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 30-601
Cow position: chrX:14181570-14180999 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 33-586
Cow position: chrX:29045269-29044716 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 209

Conread position: 41-623
Cow position: chrX:13826781-13826199 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 45-406
Cow position: chrX:14181303-14180942 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 340, 329

Conread position: 55-586
Cow position: chrX:29045331-29044800 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 64

Conread position: 55-622
Cow position: chrX:14181629-14181062 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 281

Conread position: 57-490
Cow position: chrX:14181375-14180942 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 25

Conread position: 64-623
Cow position: chrX:13826926-13826367 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 66-586
Cow position: chrX:25309746-25310266 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 316
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 110

Conread position: 105-466
Cow position: chrX:25310205-25310566 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 218
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 228, 239

Conread position: 117-574
Cow position: chrX:14181399-14180942 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 117-577
Cow position: chrX:25309713-25310173 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 290
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 25

Conread position: 126-631
Cow position: chrX:13826948-13826443 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 149

Conread position: 129-623
Cow position: chrX:14181638-14181145 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 297
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 218, 8

Conread position: 201-577
Cow position: chrX:25309713-25310089 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 150

Conread position: 282-553
Cow position: chrX:29045755-29045484 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 285-647
Cow position: chrX:25309713-25310077 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 225
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 44

Conread position: 320-601
Cow position: chrX:29045318-29045037 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 375-616
Cow position: chrX:29045746-29045505 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.