Cow genome map
| Conread name: | Ss1.1-rfat0107_a21.5.5 |
| Conread position: | 252-356 |
| Cow position: | chr2:3137675-3137571 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 400-500 |
| Cow position: | chr2:3136664-3136564 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-670 |
| Cow position: | chr2:3136194-3136079 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 714-815 |
| Cow position: | chr2:3135253-3135152 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 869-976 |
| Cow position: | chr2:3134325-3134217 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1227-1328 |
| Cow position: | chr2:3131658-3131557 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1326-1436 |
| Cow position: | chr2:3131468-3131358 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1652-1756 |
| Cow position: | chr2:3127735-3127631 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1868-2030 |
| Cow position: | chr2:3126606-3126444 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2029-2138 |
| Cow position: | chr2:3126330-3126221 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2136-2249 |
| Cow position: | chr2:3125249-3125136 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2298-2408 |
| Cow position: | chr2:3124133-3124023 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2462-2568 |
| Cow position: | chr2:3123097-3122991 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2624-2732 |
| Cow position: | chr2:3122545-3122437 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2730-3027 |
| Cow position: | chr2:3121512-3121212 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3026-3214 |
| Cow position: | chr2:3096626-3096814 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 3026-3219 |
| Cow position: | chr2:3120535-3120342 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3212-3456 |
| Cow position: | chr2:3119977-3119733 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3458-4068 |
| Cow position: | chr2:3118979-3118361 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 178 |
Show alignments to all cow chromosomes.