Cow genome map

Conread name: Ss1.1-rfbs3918b_e17.5

Conread position: 2-451
Cow position: chr1:45007141-45007589 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 170

Conread position: 12-220
Cow position: chr1:12213801-12213591 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 12-220
Cow position: chr1:57957172-57956966 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 67, 161

Conread position: 12-325
Cow position: chr1:46885778-46886095 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 214

Conread position: 12-525
Cow position: chr1:21508077-21508598 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 72

Conread position: 12-532
Cow position: chr1:22730448-22730942 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 145

Conread position: 17-238
Cow position: chr1:21403356-21403142 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 24-434
Cow position: chr1:49132422-49132008 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 257
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 270

Conread position: 25-220
Cow position: chr1:95809739-95809935 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 34

Conread position: 25-245
Cow position: chr1:40122749-40122974 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 14

Conread position: 25-264
Cow position: chr1:52488260-52488023 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 80

Conread position: 25-315
Cow position: chr1:72181532-72181813 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 124

Conread position: 25-346
Cow position: chr1:52564096-52563793 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 31, 114

Conread position: 25-358
Cow position: chr1:1403772-1403453 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 93

Conread position: 25-449
Cow position: chr1:84240601-84240999 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 29

Conread position: 25-527
Cow position: chr1:71135856-71136335 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 197, 33

Conread position: 25-547
Cow position: chr1:21954521-21954005 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 140

Conread position: 25-551
Cow position: chr1:81290212-81290729 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 131

Conread position: 27-358
Cow position: chr1:46733880-46734213 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 250

Conread position: 27-367
Cow position: chr1:83171954-83172291 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 132

Conread position: 27-523
Cow position: chr1:11020736-11021201 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 51, 146

Conread position: 27-548
Cow position: chr1:31348204-31347707 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 360
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 6

Conread position: 28-231
Cow position: chr1:51875084-51874874 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 29-230
Cow position: chr1:510553-510751 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 15

Conread position: 29-230
Cow position: chr1:48083257-48083458 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 129

Conread position: 29-263
Cow position: chr1:54732749-54732531 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 185, 29

Conread position: 29-369
Cow position: chr1:61350848-61351183 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 197

Conread position: 29-433
Cow position: chr1:41735923-41735517 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 30, 218

Conread position: 30-227
Cow position: chr1:99105178-99104985 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 74

Conread position: 32-310
Cow position: chr1:39249084-39248815 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 185, 27

Conread position: 32-441
Cow position: chr1:10064273-10063870 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 72

Conread position: 33-546
Cow position: chr1:47658060-47658568 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 71

Conread position: 36-209
Cow position: chr1:24738439-24738266 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 30

Conread position: 36-229
Cow position: chr1:2464915-2464723 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 182, 29

Conread position: 36-238
Cow position: chr1:34714355-34714153 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 131, 30

Conread position: 36-362
Cow position: chr1:54163102-54162774 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 121

Conread position: 36-524
Cow position: chr1:99609076-99609568 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 36-549
Cow position: chr1:3962972-3962465 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 36-550
Cow position: chr1:48580842-48581362 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 30

Conread position: 37-265
Cow position: chr1:4385059-4385300 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 22

Conread position: 37-446
Cow position: chr1:72286339-72285952 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 38-225
Cow position: chr1:30041437-30041623 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 53

Conread position: 38-254
Cow position: chr1:14561239-14561014 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 38-300
Cow position: chr1:67009017-67008770 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 22

Conread position: 38-544
Cow position: chr1:46839312-46839807 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 21

Conread position: 39-220
Cow position: chr1:91051954-91051770 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 32

Conread position: 39-546
Cow position: chr1:44506683-44507192 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 40-215
Cow position: chr1:57390636-57390469 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 40-461
Cow position: chr1:634905-635325 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 133

Conread position: 42-199
Cow position: chr1:29451590-29451747 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 134

Conread position: 42-263
Cow position: chr1:32631187-32631404 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 9

Conread position: 42-264
Cow position: chr1:65530188-65529961 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 42-443
Cow position: chr1:83747658-83748055 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 52

Conread position: 42-520
Cow position: chr1:13615000-13614546 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 8

Conread position: 43-166
Cow position: chr1:51359120-51358996 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 43-205
Cow position: chr1:82920163-82920002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 17

Conread position: 43-209
Cow position: chr1:29662582-29662420 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 43-216
Cow position: chr1:61534652-61534480 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 62

Conread position: 43-218
Cow position: chr1:53207978-53207803 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 132

Conread position: 43-220
Cow position: chr1:7583443-7583615 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 43-220
Cow position: chr1:56426225-56426408 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 43-220
Cow position: chr1:78291714-78291893 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 43-220
Cow position: chr1:96018989-96019156 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 83

Conread position: 43-225
Cow position: chr1:27545534-27545716 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 63

Conread position: 43-245
Cow position: chr1:88265837-88265635 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 15

Conread position: 43-249
Cow position: chr1:24561734-24561526 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 60

Conread position: 43-265
Cow position: chr1:20521967-20521748 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 62

Conread position: 43-348
Cow position: chr1:15037050-15037347 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 61

Conread position: 43-352
Cow position: chr1:11873638-11873339 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 54

Conread position: 43-402
Cow position: chr1:53595042-53595391 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 120

Conread position: 43-418
Cow position: chr1:4374621-4374249 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 43-448
Cow position: chr1:89834952-89835369 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 59

Conread position: 43-454
Cow position: chr1:84255470-84255891 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 248

Conread position: 43-469
Cow position: chr1:53308675-53308253 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 44-172
Cow position: chr1:22637676-22637548 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 83

Conread position: 44-220
Cow position: chr1:67577783-67577960 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 144

Conread position: 44-227
Cow position: chr1:94526212-94526391 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 128

Conread position: 44-237
Cow position: chr1:54484784-54484980 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 61

Conread position: 44-249
Cow position: chr1:24571169-24570964 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 174, 57

Conread position: 44-254
Cow position: chr1:102767931-102768141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 82

Conread position: 44-256
Cow position: chr1:31548556-31548769 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 69

Conread position: 44-264
Cow position: chr1:20422491-20422268 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 134

Conread position: 44-264
Cow position: chr1:57087530-57087305 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 47

Conread position: 44-265
Cow position: chr1:17032618-17032393 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 64

Conread position: 44-265
Cow position: chr1:21091238-21091464 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 44-265
Cow position: chr1:91733599-91733825 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 44-266
Cow position: chr1:17286693-17286466 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 88

Conread position: 44-266
Cow position: chr1:21300728-21300955 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 87

Conread position: 44-266
Cow position: chr1:56073741-56073521 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 21

Conread position: 44-266
Cow position: chr1:83136913-83137140 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 180

Conread position: 44-266
Cow position: chr1:85806818-85806591 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 88

Conread position: 44-269
Cow position: chr1:24909373-24909145 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 40

Conread position: 44-310
Cow position: chr1:66752281-66752011 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 190

Conread position: 44-356
Cow position: chr1:86372059-86371746 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 232

Conread position: 44-367
Cow position: chr1:57533872-57534196 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 196

Conread position: 44-368
Cow position: chr1:3061874-3061544 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 56, 137

Conread position: 44-398
Cow position: chr1:10624670-10625025 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 226
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 196

Conread position: 44-398
Cow position: chr1:12087206-12087561 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 232

Conread position: 44-398
Cow position: chr1:20832858-20833213 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 87

Conread position: 44-398
Cow position: chr1:49268859-49269214 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 87

Conread position: 44-398
Cow position: chr1:60342953-60343302 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 180

Conread position: 44-398
Cow position: chr1:91674209-91674564 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 224
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 87

Conread position: 44-402
Cow position: chr1:36930108-36929749 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 88

Conread position: 44-405
Cow position: chr1:102647551-102647198 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 129

Conread position: 44-456
Cow position: chr1:53458423-53458823 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 44-525
Cow position: chr1:54199662-54199195 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 44-529
Cow position: chr1:100421564-100422026 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 16

Conread position: 44-532
Cow position: chr1:100551689-100552176 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 115

Conread position: 44-537
Cow position: chr1:96964037-96964535 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 120

Conread position: 44-544
Cow position: chr1:22628921-22628435 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 44-550
Cow position: chr1:11772363-11771858 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 208

Conread position: 44-552
Cow position: chr1:53495180-53495680 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 228

Conread position: 45-152
Cow position: chr1:100813060-100812951 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 45-187
Cow position: chr1:20950415-20950558 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 16

Conread position: 45-200
Cow position: chr1:54179391-54179548 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 45-204
Cow position: chr1:72355829-72355980 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 94

Conread position: 45-205
Cow position: chr1:28513407-28513249 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 130

Conread position: 45-207
Cow position: chr1:59019492-59019653 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 90

Conread position: 45-208
Cow position: chr1:91370757-91370597 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 116

Conread position: 45-216
Cow position: chr1:96928545-96928373 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 10

Conread position: 45-217
Cow position: chr1:61876518-61876691 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 21

Conread position: 45-220
Cow position: chr1:5506484-5506658 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 144

Conread position: 45-220
Cow position: chr1:31815147-31815325 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 143

Conread position: 45-220
Cow position: chr1:56412019-56412195 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 58

Conread position: 45-220
Cow position: chr1:60703680-60703852 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 131

Conread position: 45-220
Cow position: chr1:65390541-65390718 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 45-220
Cow position: chr1:71779044-71779222 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 58

Conread position: 45-220
Cow position: chr1:89185470-89185288 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 58

Conread position: 45-230
Cow position: chr1:46821733-46821912 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 45-233
Cow position: chr1:24225774-24225597 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 45-237
Cow position: chr1:61149813-61149626 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 23

Conread position: 45-264
Cow position: chr1:44136732-44136528 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 173, 23

Conread position: 45-268
Cow position: chr1:57698737-57698502 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 45-332
Cow position: chr1:78689652-78689938 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 115

Conread position: 45-335
Cow position: chr1:666079-666371 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 128

Conread position: 45-337
Cow position: chr1:5873254-5872960 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 63

Conread position: 45-350
Cow position: chr1:77099821-77099527 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 130

Conread position: 45-355
Cow position: chr1:79663945-79663648 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 45-367
Cow position: chr1:88625171-88625494 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 238

Conread position: 45-369
Cow position: chr1:82504686-82505014 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 45-399
Cow position: chr1:6795213-6794855 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 29

Conread position: 45-400
Cow position: chr1:12057275-12056919 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 255

Conread position: 45-402
Cow position: chr1:75403875-75404233 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 231

Conread position: 45-410
Cow position: chr1:90864579-90864213 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 45-412
Cow position: chr1:71938786-71938427 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 27

Conread position: 45-423
Cow position: chr1:10071128-10070748 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 238

Conread position: 45-438
Cow position: chr1:20204744-20205136 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 45-455
Cow position: chr1:68253310-68253720 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 45-459
Cow position: chr1:49795719-49796122 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 45-514
Cow position: chr1:95499776-95499305 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 45-518
Cow position: chr1:88911177-88910729 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 134

Conread position: 45-524
Cow position: chr1:57576043-57575563 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 45-525
Cow position: chr1:52496495-52496970 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 134

Conread position: 45-527
Cow position: chr1:21577526-21578014 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 61

Conread position: 45-527
Cow position: chr1:33719833-33720308 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 45-532
Cow position: chr1:7739692-7740152 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 45-535
Cow position: chr1:94211953-94212431 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 45-537
Cow position: chr1:22728767-22729266 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 45-537
Cow position: chr1:74930016-74929493 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 264

Conread position: 45-541
Cow position: chr1:25183842-25184309 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 183

Conread position: 45-542
Cow position: chr1:8341-8837 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 141

Conread position: 45-548
Cow position: chr1:72035210-72034700 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 85

Conread position: 45-549
Cow position: chr1:77462083-77462565 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 45-552
Cow position: chr1:72304651-72304175 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 46-165
Cow position: chr1:101281213-101281092 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 46-264
Cow position: chr1:22745346-22745562 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 74

Conread position: 46-315
Cow position: chr1:64099541-64099276 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 168, 55

Conread position: 46-375
Cow position: chr1:95017793-95017484 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 67

Conread position: 46-453
Cow position: chr1:67821492-67821098 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 119

Conread position: 46-461
Cow position: chr1:70296988-70297409 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 145

Conread position: 46-513
Cow position: chr1:21092811-21093309 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 144

Conread position: 46-530
Cow position: chr1:86672503-86672012 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 318
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 172, 22

Conread position: 46-551
Cow position: chr1:97954728-97954254 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 47-373
Cow position: chr1:61724304-61723976 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 116

Conread position: 47-397
Cow position: chr1:99808001-99807649 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 57

Conread position: 48-181
Cow position: chr1:36920912-36920776 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 48-217
Cow position: chr1:85413257-85413427 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 55

Conread position: 48-220
Cow position: chr1:90297884-90298059 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 48-251
Cow position: chr1:37306533-37306330 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 59

Conread position: 48-337
Cow position: chr1:41004645-41004353 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 48-423
Cow position: chr1:74939919-74940293 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 237
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 31, 55

Conread position: 48-446
Cow position: chr1:66430023-66430407 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 48-525
Cow position: chr1:81228609-81228134 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 48-549
Cow position: chr1:95176657-95177142 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 222

Conread position: 48-552
Cow position: chr1:73546193-73545681 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 49-152
Cow position: chr1:55429261-55429156 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-164
Cow position: chr1:84456560-84456677 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-168
Cow position: chr1:66898755-66898634 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-170
Cow position: chr1:5289184-5289309 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 49-179
Cow position: chr1:92976918-92976785 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 65

Conread position: 49-179
Cow position: chr1:95637265-95637400 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 129

Conread position: 49-180
Cow position: chr1:26322788-26322653 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 49-183
Cow position: chr1:3963342-3963477 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 87

Conread position: 49-186
Cow position: chr1:100745432-100745291 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-187
Cow position: chr1:95945001-95944861 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 49-193
Cow position: chr1:47453992-47453846 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-193
Cow position: chr1:79632374-79632227 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 49-195
Cow position: chr1:4226966-4227111 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 58

Conread position: 49-198
Cow position: chr1:6760294-6760145 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 54

Conread position: 49-200
Cow position: chr1:79406356-79406203 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-203
Cow position: chr1:76938274-76938118 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 49-205
Cow position: chr1:3739722-3739871 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 82

Conread position: 49-205
Cow position: chr1:22199888-22200041 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 49-205
Cow position: chr1:85338851-85339008 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 54

Conread position: 49-206
Cow position: chr1:28877079-28877240 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-207
Cow position: chr1:54596952-54596792 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 49-211
Cow position: chr1:34670988-34671147 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 66

Conread position: 49-211
Cow position: chr1:65067229-65067066 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 93

Conread position: 49-212
Cow position: chr1:41138631-41138469 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 138
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 54

Conread position: 49-214
Cow position: chr1:96559065-96559227 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 54

Conread position: 49-215
Cow position: chr1:57541776-57541614 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 49-215
Cow position: chr1:63311286-63311446 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 112

Conread position: 49-215
Cow position: chr1:72813138-72813298 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 114

Conread position: 49-216
Cow position: chr1:70865247-70865414 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 62

Conread position: 49-216
Cow position: chr1:88029014-88029173 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 49-217
Cow position: chr1:3381931-3381761 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 49-217
Cow position: chr1:71676174-71676009 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 125

Conread position: 49-217
Cow position: chr1:73995412-73995582 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-218
Cow position: chr1:2317916-2317748 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 40

Conread position: 49-218
Cow position: chr1:42053602-42053440 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 124

Conread position: 49-219
Cow position: chr1:16839301-16839473 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-219
Cow position: chr1:80184016-80183846 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 141

Conread position: 49-219
Cow position: chr1:100132591-100132760 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 124

Conread position: 49-220
Cow position: chr1:1760167-1760340 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:5562083-5561913 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 54

Conread position: 49-220
Cow position: chr1:6462628-6462457 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 152

Conread position: 49-220
Cow position: chr1:18196579-18196752 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 83

Conread position: 49-220
Cow position: chr1:22229821-22229993 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 89

Conread position: 49-220
Cow position: chr1:24015606-24015433 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:25553796-25553969 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:28277373-28277543 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 40

Conread position: 49-220
Cow position: chr1:29429586-29429759 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:30082469-30082642 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:30531051-30530880 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 74

Conread position: 49-220
Cow position: chr1:31720210-31720383 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:33547416-33547243 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:38479542-38479715 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:40604009-40604180 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 88

Conread position: 49-220
Cow position: chr1:46354635-46354807 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 134

Conread position: 49-220
Cow position: chr1:47544486-47544656 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 136

Conread position: 49-220
Cow position: chr1:50510252-50510426 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 49-220
Cow position: chr1:50670799-50670972 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:52354692-52354519 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:52754419-52754246 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:58066983-58066810 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:60665216-60665389 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:62711206-62711031 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:65480936-65481109 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:66491560-66491733 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:66971189-66971016 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:73442897-73442726 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 126

Conread position: 49-220
Cow position: chr1:77553209-77553035 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 65

Conread position: 49-220
Cow position: chr1:77704711-77704537 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:78921026-78920853 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 83

Conread position: 49-220
Cow position: chr1:79445067-79444899 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 49-220
Cow position: chr1:82162207-82162035 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 55

Conread position: 49-220
Cow position: chr1:82226884-82227053 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 117

Conread position: 49-220
Cow position: chr1:82491780-82491953 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:88307502-88307337 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 21

Conread position: 49-220
Cow position: chr1:88338420-88338591 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 29, 55

Conread position: 49-220
Cow position: chr1:88678328-88678502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 164

Conread position: 49-220
Cow position: chr1:89356057-89356227 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 54

Conread position: 49-220
Cow position: chr1:90836280-90836108 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 16

Conread position: 49-220
Cow position: chr1:93858693-93858862 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 60

Conread position: 49-220
Cow position: chr1:95604734-95604907 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 72

Conread position: 49-220
Cow position: chr1:96487902-96488075 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 49-220
Cow position: chr1:97075513-97075341 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 54

Conread position: 49-220
Cow position: chr1:98574313-98574485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 125

Conread position: 49-220
Cow position: chr1:98906578-98906408 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 74

Conread position: 49-220
Cow position: chr1:99224027-99223852 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-220
Cow position: chr1:101973228-101973052 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 49-222
Cow position: chr1:63036943-63037112 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 49-222
Cow position: chr1:81579482-81579660 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 153
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 118

Conread position: 49-223
Cow position: chr1:39537982-39537811 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 101

Conread position: 49-225
Cow position: chr1:17876267-17876093 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 97

Conread position: 49-225
Cow position: chr1:40248896-40249076 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 49-225
Cow position: chr1:54294941-54294760 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 49-225
Cow position: chr1:63877071-63876892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-227
Cow position: chr1:58439318-58439151 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 49-227
Cow position: chr1:87967006-87966826 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 159, 52

Conread position: 49-228
Cow position: chr1:2204512-2204334 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 54

Conread position: 49-228
Cow position: chr1:60259163-60259338 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 57

Conread position: 49-229
Cow position: chr1:74040809-74040629 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 118

Conread position: 49-229
Cow position: chr1:86709296-86709114 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 120

Conread position: 49-230
Cow position: chr1:7022182-7022359 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 54

Conread position: 49-230
Cow position: chr1:28679013-28679193 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 57

Conread position: 49-233
Cow position: chr1:71121229-71121416 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 54

Conread position: 49-234
Cow position: chr1:3076666-3076489 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 169, 101

Conread position: 49-238
Cow position: chr1:31805227-31805407 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 63

Conread position: 49-238
Cow position: chr1:41093147-41092958 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 55

Conread position: 49-238
Cow position: chr1:64928882-64928689 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 49-238
Cow position: chr1:98577202-98577389 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 11

Conread position: 49-243
Cow position: chr1:19657753-19657951 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 96

Conread position: 49-245
Cow position: chr1:101981525-101981336 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 55

Conread position: 49-246
Cow position: chr1:5990637-5990833 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 107

Conread position: 49-250
Cow position: chr1:73756816-73757012 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 113

Conread position: 49-250
Cow position: chr1:97430929-97430720 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 49-251
Cow position: chr1:79497972-79497768 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-252
Cow position: chr1:52036721-52036513 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 128

Conread position: 49-255
Cow position: chr1:40062171-40062381 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 49-255
Cow position: chr1:55020210-55020406 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 57

Conread position: 49-256
Cow position: chr1:70933654-70933452 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 176, 26

Conread position: 49-257
Cow position: chr1:34406515-34406728 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 72

Conread position: 49-257
Cow position: chr1:77648231-77648005 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 169

Conread position: 49-259
Cow position: chr1:92198496-92198704 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 30

Conread position: 49-260
Cow position: chr1:71325524-71325313 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 130

Conread position: 49-262
Cow position: chr1:732202-731998 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 126

Conread position: 49-262
Cow position: chr1:15311591-15311805 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 30, 141

Conread position: 49-262
Cow position: chr1:43893651-43893861 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 55

Conread position: 49-263
Cow position: chr1:24528874-24528671 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 17

Conread position: 49-263
Cow position: chr1:31845758-31845965 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 55

Conread position: 49-264
Cow position: chr1:2169797-2169581 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 141

Conread position: 49-264
Cow position: chr1:10728069-10728289 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 49-264
Cow position: chr1:20125334-20125551 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 19

Conread position: 49-264
Cow position: chr1:32630694-32630911 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 49

Conread position: 49-264
Cow position: chr1:33811657-33811867 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 106

Conread position: 49-264
Cow position: chr1:38688198-38688414 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 117

Conread position: 49-264
Cow position: chr1:43285484-43285265 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 119

Conread position: 49-264
Cow position: chr1:44244771-44244551 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-264
Cow position: chr1:55780860-55781078 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 152

Conread position: 49-264
Cow position: chr1:60910068-60910289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 98

Conread position: 49-264
Cow position: chr1:64888016-64887791 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 49-264
Cow position: chr1:67014107-67014326 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 54

Conread position: 49-264
Cow position: chr1:70533067-70533287 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-265
Cow position: chr1:9870133-9869909 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 49-265
Cow position: chr1:13056807-13056589 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 56

Conread position: 49-265
Cow position: chr1:37660721-37660506 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 9

Conread position: 49-265
Cow position: chr1:59278540-59278752 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 42

Conread position: 49-265
Cow position: chr1:68282517-68282741 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 49-265
Cow position: chr1:77554018-77553797 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 49-265
Cow position: chr1:80356744-80356525 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 108

Conread position: 49-265
Cow position: chr1:84447665-84447886 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 49-266
Cow position: chr1:31341331-31341109 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 49-266
Cow position: chr1:62223907-62224129 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 49-266
Cow position: chr1:68821141-68820919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-266
Cow position: chr1:78030762-78030535 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 131

Conread position: 49-266
Cow position: chr1:81859504-81859288 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 55

Conread position: 49-266
Cow position: chr1:84602202-84601994 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 176, 30

Conread position: 49-266
Cow position: chr1:89344632-89344851 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 107

Conread position: 49-266
Cow position: chr1:91106022-91106242 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 83

Conread position: 49-266
Cow position: chr1:91903002-91903228 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-266
Cow position: chr1:97513359-97513137 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-266
Cow position: chr1:98380854-98380632 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 149

Conread position: 49-267
Cow position: chr1:23623878-23624113 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 211

Conread position: 49-267
Cow position: chr1:29520141-29519916 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 49-269
Cow position: chr1:8884546-8884771 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:22546796-22547021 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:34197931-34198156 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:50687707-50687932 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:64778407-64778632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:76917052-76917277 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:84284687-84284913 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 49-269
Cow position: chr1:97512639-97512862 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 191

Conread position: 49-269
Cow position: chr1:99100825-99101050 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 49-297
Cow position: chr1:81472602-81472844 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 121

Conread position: 49-316
Cow position: chr1:70282664-70282926 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 176, 30

Conread position: 49-331
Cow position: chr1:29791946-29791671 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 95

Conread position: 49-334
Cow position: chr1:34000628-34000915 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 249

Conread position: 49-334
Cow position: chr1:82861496-82861785 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 248

Conread position: 49-335
Cow position: chr1:8532491-8532208 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 78

Conread position: 49-335
Cow position: chr1:16373032-16373319 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 226

Conread position: 49-335
Cow position: chr1:30312411-30312698 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-335
Cow position: chr1:57577451-57577738 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-335
Cow position: chr1:62530536-62530823 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-337
Cow position: chr1:3456595-3456876 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 49-343
Cow position: chr1:69249013-69249303 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 180, 53

Conread position: 49-349
Cow position: chr1:44836509-44836204 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 148

Conread position: 49-350
Cow position: chr1:48735918-48736220 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 197
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-350
Cow position: chr1:52381426-52381728 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 194
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-350
Cow position: chr1:78783269-78783568 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 124

Conread position: 49-351
Cow position: chr1:7867756-7868059 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 195
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-351
Cow position: chr1:21037834-21038137 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-351
Cow position: chr1:21060438-21060740 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 226

Conread position: 49-351
Cow position: chr1:26789725-26790028 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-351
Cow position: chr1:34534225-34534528 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 227

Conread position: 49-356
Cow position: chr1:12283339-12283644 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 49-357
Cow position: chr1:7325021-7325330 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:2990467-2990777 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:8845602-8845912 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:9444117-9443821 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 229, 29

Conread position: 49-358
Cow position: chr1:12375099-12375409 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 70

Conread position: 49-358
Cow position: chr1:13150525-13150835 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:13298517-13298827 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:16013293-16013605 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 229

Conread position: 49-358
Cow position: chr1:16820590-16820900 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 227

Conread position: 49-358
Cow position: chr1:17450444-17450134 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:19357406-19357714 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 253

Conread position: 49-358
Cow position: chr1:20389150-20389460 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 82

Conread position: 49-358
Cow position: chr1:31405735-31406045 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:51366090-51366397 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 175

Conread position: 49-358
Cow position: chr1:54174662-54174969 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 219

Conread position: 49-358
Cow position: chr1:57538333-57538643 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:58386102-58386412 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:61638893-61639203 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 253

Conread position: 49-358
Cow position: chr1:66909551-66909861 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:68087589-68087899 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:76478653-76478963 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:77223120-77223430 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:80010947-80011257 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:80869829-80870143 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 255

Conread position: 49-358
Cow position: chr1:87565233-87565543 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-358
Cow position: chr1:97171305-97171615 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-359
Cow position: chr1:3752220-3751909 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 115

Conread position: 49-359
Cow position: chr1:22467651-22467964 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 126

Conread position: 49-362
Cow position: chr1:8402455-8402768 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-362
Cow position: chr1:13131189-13131502 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-362
Cow position: chr1:18208220-18208531 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 107

Conread position: 49-362
Cow position: chr1:34820914-34821227 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-362
Cow position: chr1:67001655-67001968 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-362
Cow position: chr1:70897727-70898038 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 214

Conread position: 49-362
Cow position: chr1:97422574-97422264 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 125

Conread position: 49-364
Cow position: chr1:5301083-5301399 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-364
Cow position: chr1:26588932-26589249 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 228

Conread position: 49-364
Cow position: chr1:52068497-52068811 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-364
Cow position: chr1:68280131-68280445 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 227

Conread position: 49-364
Cow position: chr1:95457335-95457651 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 242

Conread position: 49-367
Cow position: chr1:1028351-1028670 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 227

Conread position: 49-367
Cow position: chr1:7892063-7892381 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 204
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 226

Conread position: 49-367
Cow position: chr1:10498885-10499207 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 230

Conread position: 49-367
Cow position: chr1:22262092-22262408 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 227

Conread position: 49-367
Cow position: chr1:47418429-47418748 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 205
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 226

Conread position: 49-367
Cow position: chr1:52850269-52850588 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 227

Conread position: 49-367
Cow position: chr1:85795931-85796250 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 234

Conread position: 49-367
Cow position: chr1:86497273-86497592 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 227

Conread position: 49-369
Cow position: chr1:22448861-22448542 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 49-369
Cow position: chr1:56719036-56719341 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 87

Conread position: 49-369
Cow position: chr1:73561926-73561608 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 49-372
Cow position: chr1:61281994-61282317 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 227

Conread position: 49-372
Cow position: chr1:82482137-82481813 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 227

Conread position: 49-372
Cow position: chr1:98985200-98984874 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 228

Conread position: 49-376
Cow position: chr1:10119938-10120266 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 227

Conread position: 49-376
Cow position: chr1:22143005-22143334 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 227

Conread position: 49-377
Cow position: chr1:98562883-98563209 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-386
Cow position: chr1:99136707-99136374 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 49-390
Cow position: chr1:24235795-24235459 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 49-390
Cow position: chr1:55260707-55260375 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 29, 59

Conread position: 49-390
Cow position: chr1:60907084-60907437 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 271

Conread position: 49-396
Cow position: chr1:13895763-13895416 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 65

Conread position: 49-397
Cow position: chr1:475862-476211 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 227

Conread position: 49-397
Cow position: chr1:1991707-1991351 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 203

Conread position: 49-398
Cow position: chr1:17457519-17457868 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 137

Conread position: 49-398
Cow position: chr1:21539187-21539535 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 224
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 49-398
Cow position: chr1:72624837-72625185 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 227

Conread position: 49-401
Cow position: chr1:57305554-57305890 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 26, 125

Conread position: 49-402
Cow position: chr1:2219228-2218873 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 54

Conread position: 49-402
Cow position: chr1:3930136-3929786 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 114

Conread position: 49-402
Cow position: chr1:15178903-15179255 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 227

Conread position: 49-402
Cow position: chr1:18638095-18638449 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 228
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 253

Conread position: 49-402
Cow position: chr1:32562555-32562201 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 251

Conread position: 49-402
Cow position: chr1:59627040-59627393 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 226

Conread position: 49-402
Cow position: chr1:85151456-85151109 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 78

Conread position: 49-402
Cow position: chr1:90604861-90604503 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 78

Conread position: 49-402
Cow position: chr1:90913807-90914161 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 246

Conread position: 49-409
Cow position: chr1:71257760-71257387 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 223

Conread position: 49-409
Cow position: chr1:91817048-91816692 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 49-411
Cow position: chr1:51980950-51981303 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 219

Conread position: 49-411
Cow position: chr1:68217637-68217285 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 49-411
Cow position: chr1:79590823-79591179 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 239

Conread position: 49-411
Cow position: chr1:97761351-97761681 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 121

Conread position: 49-412
Cow position: chr1:31190381-31190029 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 29, 77

Conread position: 49-412
Cow position: chr1:85596669-85597020 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 49-419
Cow position: chr1:95687378-95687006 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 48

Conread position: 49-420
Cow position: chr1:57573603-57573236 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 239
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 118

Conread position: 49-420
Cow position: chr1:64062059-64062433 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 242
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 82

Conread position: 49-423
Cow position: chr1:22251351-22250980 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 243
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 49-426
Cow position: chr1:13404403-13404025 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 7

Conread position: 49-426
Cow position: chr1:64818167-64817786 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 241
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 234

Conread position: 49-427
Cow position: chr1:3538026-3537648 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 243
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 233

Conread position: 49-427
Cow position: chr1:35071305-35071684 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 234
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 82

Conread position: 49-427
Cow position: chr1:57760081-57760459 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 248
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 59

Conread position: 49-427
Cow position: chr1:62507261-62506881 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 74

Conread position: 49-431
Cow position: chr1:20384902-20384522 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 131

Conread position: 49-434
Cow position: chr1:52170861-52170474 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 250
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 233

Conread position: 49-437
Cow position: chr1:81355980-81355596 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-437
Cow position: chr1:92433743-92434106 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 43

Conread position: 49-438
Cow position: chr1:7350261-7350655 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 387

Conread position: 49-441
Cow position: chr1:53424915-53425288 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 26

Conread position: 49-442
Cow position: chr1:82884662-82884283 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 49-443
Cow position: chr1:45289148-45288759 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 63

Conread position: 49-443
Cow position: chr1:91039436-91039061 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 49

Conread position: 49-445
Cow position: chr1:37309785-37309404 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 49-446
Cow position: chr1:43822100-43822515 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 54

Conread position: 49-447
Cow position: chr1:21678866-21679275 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 24

Conread position: 49-448
Cow position: chr1:21460593-21460988 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 49-448
Cow position: chr1:51968193-51968580 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 49-449
Cow position: chr1:30441678-30442075 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 49, 36

Conread position: 49-453
Cow position: chr1:4027584-4027986 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 216

Conread position: 49-453
Cow position: chr1:8349586-8349201 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 123

Conread position: 49-453
Cow position: chr1:69264545-69264931 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-454
Cow position: chr1:11226522-11226124 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-454
Cow position: chr1:61175906-61176302 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 131

Conread position: 49-455
Cow position: chr1:37887063-37886687 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 49-455
Cow position: chr1:100800080-100800476 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-456
Cow position: chr1:81613108-81613515 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 222

Conread position: 49-456
Cow position: chr1:98360691-98360278 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 242

Conread position: 49-461
Cow position: chr1:42968591-42968188 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 39

Conread position: 49-461
Cow position: chr1:94226825-94226424 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 128

Conread position: 49-462
Cow position: chr1:34300825-34300419 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 149

Conread position: 49-462
Cow position: chr1:48731101-48730701 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Conread position: 49-463
Cow position: chr1:58889572-58889163 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 279
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 55

Conread position: 49-463
Cow position: chr1:79844192-79844598 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 49-468
Cow position: chr1:88652354-88652775 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-468
Cow position: chr1:99614175-99614580 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 37

Conread position: 49-478
Cow position: chr1:74822173-74822601 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 222

Conread position: 49-480
Cow position: chr1:29916141-29916559 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 34

Conread position: 49-483
Cow position: chr1:52039360-52039793 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-498
Cow position: chr1:80336527-80336086 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 207

Conread position: 49-509
Cow position: chr1:7233041-7233474 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 290
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 73

Conread position: 49-509
Cow position: chr1:101551180-101551638 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 195

Conread position: 49-516
Cow position: chr1:11914149-11913688 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 49-516
Cow position: chr1:77720504-77720067 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 49-519
Cow position: chr1:68845757-68845310 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 49-523
Cow position: chr1:55357557-55357089 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 22

Conread position: 49-523
Cow position: chr1:68854905-68855366 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 24

Conread position: 49-524
Cow position: chr1:39418395-39417930 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-524
Cow position: chr1:53520635-53521106 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 23

Conread position: 49-524
Cow position: chr1:82880388-82880832 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 49-524
Cow position: chr1:83982653-83982175 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 127

Conread position: 49-525
Cow position: chr1:41181564-41182038 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 115

Conread position: 49-525
Cow position: chr1:85361578-85362039 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 175

Conread position: 49-525
Cow position: chr1:89742289-89741794 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 232

Conread position: 49-525
Cow position: chr1:101713837-101714318 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 177

Conread position: 49-527
Cow position: chr1:1877749-1878227 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 142

Conread position: 49-527
Cow position: chr1:11853967-11853482 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 262

Conread position: 49-527
Cow position: chr1:12222882-12222400 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 49-527
Cow position: chr1:35162127-35162609 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 49-527
Cow position: chr1:35844207-35843737 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 49-527
Cow position: chr1:41056407-41056884 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 49-527
Cow position: chr1:42256787-42256301 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 247

Conread position: 49-527
Cow position: chr1:56225201-56225670 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 49-527
Cow position: chr1:63504064-63504518 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 52

Conread position: 49-527
Cow position: chr1:84282784-84283275 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 258

Conread position: 49-527
Cow position: chr1:85028684-85029140 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 49-527
Cow position: chr1:96365397-96365853 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 49-528
Cow position: chr1:25119296-25118826 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 312
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 74

Conread position: 49-532
Cow position: chr1:42874224-42873768 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 127

Conread position: 49-532
Cow position: chr1:91066425-91065948 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 49-532
Cow position: chr1:97755249-97755709 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 63

Conread position: 49-533
Cow position: chr1:61392070-61391586 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 49-533
Cow position: chr1:97622479-97622029 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 334
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 128

Conread position: 49-533
Cow position: chr1:101822773-101822294 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 356
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 46

Conread position: 49-537
Cow position: chr1:26688755-26688279 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 331
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 10

Conread position: 49-537
Cow position: chr1:43352926-43352441 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 45

Conread position: 49-537
Cow position: chr1:69539420-69539897 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 49-537
Cow position: chr1:82936859-82936391 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 126

Conread position: 49-538
Cow position: chr1:29627192-29626696 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 49-540
Cow position: chr1:53374157-53374644 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 126

Conread position: 49-545
Cow position: chr1:15547192-15547686 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-545
Cow position: chr1:24133332-24132841 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-545
Cow position: chr1:41696784-41697277 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 33

Conread position: 49-545
Cow position: chr1:42887538-42887060 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 137

Conread position: 49-546
Cow position: chr1:81161741-81162224 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 328
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 11

Conread position: 49-547
Cow position: chr1:66355986-66355508 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 49-547
Cow position: chr1:83082728-83083217 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 334
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 35

Conread position: 49-548
Cow position: chr1:31765672-31765147 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 49-549
Cow position: chr1:60032875-60032385 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 49-549
Cow position: chr1:63435080-63434575 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 49-549
Cow position: chr1:101915892-101916397 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 49-550
Cow position: chr1:40599775-40600248 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 49-550
Cow position: chr1:52329805-52329290 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 123

Conread position: 49-550
Cow position: chr1:92963113-92963604 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 49-550
Cow position: chr1:94875955-94875441 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 49-550
Cow position: chr1:99642648-99642140 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 146

Conread position: 49-551
Cow position: chr1:77620269-77620780 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 107

Conread position: 49-551
Cow position: chr1:78091755-78092266 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 49-552
Cow position: chr1:63596338-63595824 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 165

Conread position: 49-552
Cow position: chr1:68276130-68276647 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 49-552
Cow position: chr1:72012084-72011596 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 49-552
Cow position: chr1:72069104-72068608 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 50-152
Cow position: chr1:55585871-55585768 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 53

Conread position: 50-196
Cow position: chr1:72104871-72105019 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 15

Conread position: 50-210
Cow position: chr1:26934813-26934655 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 50-210
Cow position: chr1:42869428-42869277 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 50-219
Cow position: chr1:8659372-8659542 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 105

Conread position: 50-220
Cow position: chr1:22630576-22630748 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 50-221
Cow position: chr1:3037035-3037208 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 100

Conread position: 50-229
Cow position: chr1:61304405-61304581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 126

Conread position: 50-234
Cow position: chr1:67406372-67406551 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 42

Conread position: 50-243
Cow position: chr1:83702-83891 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 58

Conread position: 50-246
Cow position: chr1:50765088-50765275 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 50-256
Cow position: chr1:84786495-84786705 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 53

Conread position: 50-264
Cow position: chr1:4589757-4589536 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 133

Conread position: 50-264
Cow position: chr1:99398601-99398820 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 50-265
Cow position: chr1:7800336-7800552 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 53

Conread position: 50-265
Cow position: chr1:14528476-14528257 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 181

Conread position: 50-265
Cow position: chr1:73433147-73432927 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 50-266
Cow position: chr1:75093218-75093439 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 50-266
Cow position: chr1:86543979-86543758 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 50-335
Cow position: chr1:21572767-21573058 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 267

Conread position: 50-349
Cow position: chr1:61725389-61725095 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 174

Conread position: 50-358
Cow position: chr1:6499892-6500201 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 226

Conread position: 50-358
Cow position: chr1:17056450-17056759 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 226

Conread position: 50-359
Cow position: chr1:101547318-101547001 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 61

Conread position: 50-402
Cow position: chr1:11659367-11659719 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 70

Conread position: 50-402
Cow position: chr1:58191587-58191231 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 10

Conread position: 50-411
Cow position: chr1:10719766-10719399 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 110

Conread position: 50-411
Cow position: chr1:52753442-52753079 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 123

Conread position: 50-419
Cow position: chr1:92437267-92436901 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 123

Conread position: 50-449
Cow position: chr1:3167342-3166956 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 50-449
Cow position: chr1:89349701-89350084 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 50-503
Cow position: chr1:19440294-19439857 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 296
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 75

Conread position: 50-505
Cow position: chr1:53397708-53398155 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 208

Conread position: 50-519
Cow position: chr1:26896101-26895616 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 113

Conread position: 50-522
Cow position: chr1:23041299-23041743 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 311
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 54

Conread position: 50-525
Cow position: chr1:874367-874865 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 50-526
Cow position: chr1:12464929-12464462 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 18

Conread position: 50-533
Cow position: chr1:71748283-71747824 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 109

Conread position: 50-535
Cow position: chr1:81569312-81568817 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 240

Conread position: 50-539
Cow position: chr1:48105712-48105209 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 50-544
Cow position: chr1:101634425-101634920 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 118

Conread position: 50-549
Cow position: chr1:93499346-93499844 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 205

Conread position: 50-550
Cow position: chr1:36997921-36998405 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 54

Conread position: 50-551
Cow position: chr1:18937109-18936611 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 220

Conread position: 50-551
Cow position: chr1:31934237-31934730 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 106

Conread position: 50-551
Cow position: chr1:36880002-36880514 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 140

Conread position: 50-552
Cow position: chr1:1981388-1980880 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 50-552
Cow position: chr1:13548266-13547758 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 129

Conread position: 50-552
Cow position: chr1:52434992-52435501 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 127

Conread position: 51-220
Cow position: chr1:7685912-7685742 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 52

Conread position: 51-220
Cow position: chr1:40122226-40122398 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 51-220
Cow position: chr1:72462863-72463038 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 80

Conread position: 51-220
Cow position: chr1:86706165-86706335 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 93

Conread position: 51-221
Cow position: chr1:15743803-15743975 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 51-229
Cow position: chr1:79002228-79002060 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 14

Conread position: 51-230
Cow position: chr1:99628092-99627913 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 127

Conread position: 51-240
Cow position: chr1:8160874-8160685 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 23

Conread position: 51-246
Cow position: chr1:89840989-89841182 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 51-264
Cow position: chr1:43211503-43211709 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 72

Conread position: 51-264
Cow position: chr1:55686494-55686279 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 64

Conread position: 51-264
Cow position: chr1:60120154-60120370 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 41

Conread position: 51-266
Cow position: chr1:13451774-13451993 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 76

Conread position: 51-269
Cow position: chr1:32360412-32360202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 51-335
Cow position: chr1:99638055-99637775 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 138

Conread position: 51-340
Cow position: chr1:91142430-91142138 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 54

Conread position: 51-349
Cow position: chr1:71946645-71946351 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 51-367
Cow position: chr1:76222966-76222651 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 123

Conread position: 51-402
Cow position: chr1:82502584-82502945 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 80

Conread position: 51-423
Cow position: chr1:90640750-90641121 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 51-429
Cow position: chr1:91800874-91800499 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 51-448
Cow position: chr1:36613550-36613142 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 122

Conread position: 51-456
Cow position: chr1:90868713-90868321 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 103

Conread position: 51-496
Cow position: chr1:1053313-1053755 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 122

Conread position: 51-524
Cow position: chr1:86113688-86113195 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 100

Conread position: 51-525
Cow position: chr1:102756696-102756234 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 313
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 54

Conread position: 51-527
Cow position: chr1:1956605-1956134 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 123

Conread position: 51-527
Cow position: chr1:102266546-102266066 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 51-528
Cow position: chr1:62964004-62964473 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 110

Conread position: 51-548
Cow position: chr1:71691539-71692047 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 280

Conread position: 52-183
Cow position: chr1:42175289-42175422 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 52-220
Cow position: chr1:9437823-9437657 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 111

Conread position: 52-220
Cow position: chr1:88392316-88392153 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 52-228
Cow position: chr1:88648236-88648054 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 173

Conread position: 52-265
Cow position: chr1:97206340-97206559 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 52-350
Cow position: chr1:73522414-73522127 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 52-351
Cow position: chr1:68912481-68912760 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 26, 41

Conread position: 52-449
Cow position: chr1:100705860-100706245 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 50

Conread position: 52-452
Cow position: chr1:89342263-89341858 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 33

Conread position: 52-481
Cow position: chr1:56228980-56229388 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 52-505
Cow position: chr1:61735713-61735266 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 52-517
Cow position: chr1:60986695-60987186 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 169

Conread position: 52-527
Cow position: chr1:32341481-32341010 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 51

Conread position: 52-537
Cow position: chr1:10778300-10778768 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 51

Conread position: 52-537
Cow position: chr1:89510206-89509716 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 52-540
Cow position: chr1:2075602-2075134 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 52-552
Cow position: chr1:73960426-73960918 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 231

Conread position: 53-148
Cow position: chr1:98412668-98412765 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 53-220
Cow position: chr1:97284649-97284482 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 13

Conread position: 53-223
Cow position: chr1:60491934-60492100 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 102

Conread position: 53-264
Cow position: chr1:23969308-23969099 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 119

Conread position: 53-264
Cow position: chr1:44164807-44165020 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 49

Conread position: 53-352
Cow position: chr1:67616263-67616549 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 74

Conread position: 53-362
Cow position: chr1:41486598-41486908 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 250

Conread position: 53-366
Cow position: chr1:47008756-47009069 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 138

Conread position: 53-407
Cow position: chr1:44769382-44769032 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 50

Conread position: 53-462
Cow position: chr1:98551444-98551851 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 39

Conread position: 53-524
Cow position: chr1:71045478-71045936 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 53-525
Cow position: chr1:92370632-92370166 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 43

Conread position: 53-527
Cow position: chr1:46218311-46218754 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 113

Conread position: 53-536
Cow position: chr1:54207089-54206605 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 61

Conread position: 53-537
Cow position: chr1:3657640-3657174 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 333
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 26, 92

Conread position: 53-545
Cow position: chr1:45020077-45019584 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 51

Conread position: 53-545
Cow position: chr1:63391045-63390544 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 49

Conread position: 53-549
Cow position: chr1:27358668-27359169 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 332
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 192

Conread position: 53-552
Cow position: chr1:53369798-53370315 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 6

Conread position: 54-209
Cow position: chr1:36654319-36654475 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 150

Conread position: 54-397
Cow position: chr1:40059153-40059500 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 195

Conread position: 54-449
Cow position: chr1:31499355-31499744 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 119

Conread position: 54-452
Cow position: chr1:4032364-4032754 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 105

Conread position: 54-532
Cow position: chr1:16855960-16855493 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 55-220
Cow position: chr1:40265411-40265245 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 48

Conread position: 55-250
Cow position: chr1:23634171-23633981 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 51

Conread position: 55-264
Cow position: chr1:4441376-4441165 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 49

Conread position: 55-265
Cow position: chr1:4026914-4027131 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 39

Conread position: 55-369
Cow position: chr1:43380300-43379985 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 119

Conread position: 55-462
Cow position: chr1:33997183-33996792 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 163

Conread position: 55-508
Cow position: chr1:101792370-101791932 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 314
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 119

Conread position: 55-527
Cow position: chr1:57119615-57119162 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 311
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 50

Conread position: 55-535
Cow position: chr1:61005836-61005345 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 55-552
Cow position: chr1:20001023-20000529 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 55-552
Cow position: chr1:22826895-22827374 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 55-552
Cow position: chr1:43839256-43839737 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 120

Conread position: 56-157
Cow position: chr1:22823667-22823770 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 56-191
Cow position: chr1:50032374-50032511 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 56-204
Cow position: chr1:37726645-37726500 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 110

Conread position: 56-213
Cow position: chr1:31358476-31358318 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 47

Conread position: 56-217
Cow position: chr1:68717253-68717090 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 56-220
Cow position: chr1:20564492-20564659 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 56-220
Cow position: chr1:83184980-83185143 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 69

Conread position: 56-220
Cow position: chr1:90095764-90095598 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 56-226
Cow position: chr1:27462727-27462891 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 46

Conread position: 56-234
Cow position: chr1:98494157-98494334 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 47

Conread position: 56-250
Cow position: chr1:30034276-30034464 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 63

Conread position: 56-256
Cow position: chr1:69941238-69941037 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 121

Conread position: 56-263
Cow position: chr1:21131356-21131158 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 106

Conread position: 56-263
Cow position: chr1:31399498-31399288 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 176

Conread position: 56-263
Cow position: chr1:46940132-46939922 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 113

Conread position: 56-263
Cow position: chr1:81321239-81321447 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 15

Conread position: 56-264
Cow position: chr1:69445100-69445302 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 49

Conread position: 56-264
Cow position: chr1:102519400-102519603 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 17

Conread position: 56-266
Cow position: chr1:59201595-59201381 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 85

Conread position: 56-269
Cow position: chr1:25284739-25284957 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 56-271
Cow position: chr1:24202009-24201801 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 100

Conread position: 56-316
Cow position: chr1:71797170-71796924 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 105

Conread position: 56-335
Cow position: chr1:5409884-5409610 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 141

Conread position: 56-348
Cow position: chr1:1801874-1802159 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 47

Conread position: 56-349
Cow position: chr1:15307764-15308056 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 162

Conread position: 56-372
Cow position: chr1:55163652-55163961 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 56-385
Cow position: chr1:100771005-100770697 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 47

Conread position: 56-388
Cow position: chr1:44154992-44155308 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 56-401
Cow position: chr1:22295708-22295363 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 223
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 227

Conread position: 56-405
Cow position: chr1:73196510-73196154 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 38

Conread position: 56-445
Cow position: chr1:95215451-95215075 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 10

Conread position: 56-453
Cow position: chr1:80988076-80988469 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 117

Conread position: 56-462
Cow position: chr1:36874745-36875158 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 79

Conread position: 56-500
Cow position: chr1:89937633-89937201 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 231

Conread position: 56-501
Cow position: chr1:13637937-13637487 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 26

Conread position: 56-517
Cow position: chr1:53622695-53623148 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 56-517
Cow position: chr1:100400471-100400010 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 56-524
Cow position: chr1:20099088-20099548 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 192

Conread position: 56-526
Cow position: chr1:33331343-33330899 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 56-526
Cow position: chr1:48444451-48443988 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 12

Conread position: 56-527
Cow position: chr1:25383389-25383873 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 109

Conread position: 56-527
Cow position: chr1:61742238-61741760 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 106

Conread position: 56-527
Cow position: chr1:64678427-64678884 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 204

Conread position: 56-527
Cow position: chr1:69695279-69694803 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 260

Conread position: 56-527
Cow position: chr1:87888133-87888594 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 56-535
Cow position: chr1:61564521-61564993 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 227

Conread position: 56-540
Cow position: chr1:34159562-34160045 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 56-548
Cow position: chr1:66138047-66138543 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 56-552
Cow position: chr1:35491849-35491345 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 320
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 90

Conread position: 56-552
Cow position: chr1:69670485-69669988 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 309
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 226

Conread position: 57-147
Cow position: chr1:60280823-60280915 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 57-193
Cow position: chr1:38418806-38418944 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 57-359
Cow position: chr1:99095096-99095393 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 162, 88

Conread position: 57-455
Cow position: chr1:81913421-81913030 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 212

Conread position: 57-455
Cow position: chr1:96136216-96136591 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 98

Conread position: 57-498
Cow position: chr1:49433535-49433086 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 57-518
Cow position: chr1:26930242-26929799 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 305
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 45

Conread position: 57-527
Cow position: chr1:95100694-95101155 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 57-549
Cow position: chr1:63240678-63241200 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 347
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 56

Conread position: 59-220
Cow position: chr1:49181787-49181950 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 59-226
Cow position: chr1:63445322-63445492 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 126

Conread position: 59-229
Cow position: chr1:14649237-14649065 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 37

Conread position: 59-257
Cow position: chr1:96193138-96192932 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 7

Conread position: 59-462
Cow position: chr1:56711883-56711469 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 6

Conread position: 59-527
Cow position: chr1:51394151-51394622 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 122

Conread position: 60-215
Cow position: chr1:101776398-101776555 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 72

Conread position: 60-225
Cow position: chr1:72803505-72803333 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 60-259
Cow position: chr1:4239271-4239469 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 132

Conread position: 60-264
Cow position: chr1:33701853-33702057 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 117

Conread position: 60-399
Cow position: chr1:43358276-43357941 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 158, 6

Conread position: 60-516
Cow position: chr1:80764800-80764361 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 112

Conread position: 60-517
Cow position: chr1:54258303-54258763 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 111

Conread position: 61-535
Cow position: chr1:78810770-78811251 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 43

Conread position: 62-153
Cow position: chr1:32355042-32354949 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 62-420
Cow position: chr1:60707139-60707493 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 16, 114

Conread position: 62-552
Cow position: chr1:73584664-73584178 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 82

Conread position: 63-214
Cow position: chr1:85866797-85866949 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 86

Conread position: 63-246
Cow position: chr1:1348087-1347908 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 129

Conread position: 64-225
Cow position: chr1:39183075-39182923 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 41

Conread position: 64-232
Cow position: chr1:61661565-61661402 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 154, 47

Conread position: 64-527
Cow position: chr1:42555010-42555447 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 37

Conread position: 64-540
Cow position: chr1:96713074-96712605 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 299
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 153, 107

Conread position: 64-546
Cow position: chr1:29935641-29935170 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 37

Conread position: 65-194
Cow position: chr1:71331813-71331686 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 65-217
Cow position: chr1:86364495-86364645 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 65-220
Cow position: chr1:60086346-60086500 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 99

Conread position: 65-225
Cow position: chr1:79465518-79465680 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 65-229
Cow position: chr1:52774782-52774620 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 108

Conread position: 65-229
Cow position: chr1:58385275-58385444 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 65-229
Cow position: chr1:72641748-72641911 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 159, 0

Conread position: 65-229
Cow position: chr1:72790924-72791084 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 39

Conread position: 65-250
Cow position: chr1:59557463-59557645 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 0

Conread position: 65-252
Cow position: chr1:40497325-40497505 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 36

Conread position: 65-254
Cow position: chr1:4619129-4618935 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 65-256
Cow position: chr1:84226636-84226452 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 65-262
Cow position: chr1:97100570-97100378 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 161, 47

Conread position: 65-263
Cow position: chr1:33716962-33717165 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 151, 0

Conread position: 65-264
Cow position: chr1:19998294-19998103 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 65-264
Cow position: chr1:39702575-39702759 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 26

Conread position: 65-264
Cow position: chr1:84116141-84116336 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 41

Conread position: 65-264
Cow position: chr1:95327414-95327213 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 182

Conread position: 65-264
Cow position: chr1:98612982-98613180 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 37

Conread position: 65-265
Cow position: chr1:13133090-13132896 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 65-265
Cow position: chr1:59910091-59910288 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 8

Conread position: 65-266
Cow position: chr1:16973103-16972902 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 111

Conread position: 65-266
Cow position: chr1:97620099-97619897 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 153, 36

Conread position: 65-333
Cow position: chr1:87216203-87216462 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 14

Conread position: 65-352
Cow position: chr1:78195930-78196217 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 92

Conread position: 65-353
Cow position: chr1:3340677-3340961 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 196

Conread position: 65-390
Cow position: chr1:53039958-53039641 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 164, 55

Conread position: 65-393
Cow position: chr1:57639779-57639452 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 36

Conread position: 65-409
Cow position: chr1:96478435-96478779 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 92

Conread position: 65-412
Cow position: chr1:6939898-6939554 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 157, 96

Conread position: 65-423
Cow position: chr1:55146542-55146891 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 65-431
Cow position: chr1:26943051-26943409 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 103

Conread position: 65-443
Cow position: chr1:80899849-80900232 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 65-448
Cow position: chr1:72141305-72141690 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 267
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 153, 105

Conread position: 65-452
Cow position: chr1:39510303-39509936 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 53

Conread position: 65-453
Cow position: chr1:41252662-41252287 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 154

Conread position: 65-454
Cow position: chr1:44125896-44125515 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 37

Conread position: 65-462
Cow position: chr1:77880974-77880603 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 36

Conread position: 65-469
Cow position: chr1:93810184-93810570 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 168, 26

Conread position: 65-524
Cow position: chr1:82338044-82337579 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 65-525
Cow position: chr1:38278304-38277824 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 39

Conread position: 65-527
Cow position: chr1:43505262-43505728 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 101

Conread position: 65-527
Cow position: chr1:71295569-71295100 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 65-527
Cow position: chr1:75744601-75745064 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 109

Conread position: 65-527
Cow position: chr1:79165351-79164878 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 221

Conread position: 65-527
Cow position: chr1:82406814-82406329 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 98

Conread position: 65-532
Cow position: chr1:3323596-3324083 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 98

Conread position: 65-532
Cow position: chr1:70828655-70829105 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 48

Conread position: 65-536
Cow position: chr1:54478063-54478529 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 100

Conread position: 65-543
Cow position: chr1:22836143-22836619 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 37

Conread position: 65-544
Cow position: chr1:21787067-21787546 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 220

Conread position: 65-551
Cow position: chr1:46693915-46693424 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 59

Conread position: 65-552
Cow position: chr1:7657575-7657104 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 335
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 160

Conread position: 66-205
Cow position: chr1:33081282-33081147 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 66-211
Cow position: chr1:76170025-76170167 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 105

Conread position: 66-211
Cow position: chr1:98023653-98023511 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 108

Conread position: 66-213
Cow position: chr1:1459518-1459373 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 66-219
Cow position: chr1:29462596-29462743 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 136, 34

Conread position: 66-225
Cow position: chr1:57981807-57981650 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 66-225
Cow position: chr1:65144719-65144564 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 66-225
Cow position: chr1:77589834-77589992 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 25

Conread position: 66-225
Cow position: chr1:85410398-85410240 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 38

Conread position: 66-229
Cow position: chr1:15367207-15367050 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 153, 38

Conread position: 66-229
Cow position: chr1:86020325-86020160 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 78

Conread position: 66-229
Cow position: chr1:99690895-99691056 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 108

Conread position: 66-234
Cow position: chr1:52510501-52510337 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 66-236
Cow position: chr1:78794993-78794824 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 140, 36

Conread position: 66-246
Cow position: chr1:82370491-82370665 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 67

Conread position: 66-247
Cow position: chr1:20377587-20377403 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 66-260
Cow position: chr1:29379933-29379739 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 47

Conread position: 66-264
Cow position: chr1:63905732-63905534 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 152, 80

Conread position: 66-264
Cow position: chr1:81180238-81180036 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 152, 0

Conread position: 66-300
Cow position: chr1:86614608-86614834 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 156, 35

Conread position: 66-307
Cow position: chr1:100537552-100537791 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 119, 160

Conread position: 66-340
Cow position: chr1:3661314-3661054 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 107

Conread position: 66-349
Cow position: chr1:56748332-56748620 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 151, 35

Conread position: 66-352
Cow position: chr1:28068090-28068375 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 152, 94

Conread position: 66-357
Cow position: chr1:5162311-5162017 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 87

Conread position: 66-363
Cow position: chr1:7731467-7731764 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 154, 38

Conread position: 66-363
Cow position: chr1:32244657-32244362 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 58

Conread position: 66-376
Cow position: chr1:45535444-45535753 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 43

Conread position: 66-382
Cow position: chr1:57635209-57635514 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 153, 35

Conread position: 66-409
Cow position: chr1:51628762-51628434 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 203

Conread position: 66-412
Cow position: chr1:29975855-29975518 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 152, 35

Conread position: 66-428
Cow position: chr1:69540025-69540380 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 35

Conread position: 66-435
Cow position: chr1:30413325-30413694 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 128

Conread position: 66-441
Cow position: chr1:64251309-64250941 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 66-444
Cow position: chr1:85774201-85774571 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 128

Conread position: 66-451
Cow position: chr1:39069209-39068835 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 97

Conread position: 66-458
Cow position: chr1:80973872-80973482 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 105

Conread position: 66-516
Cow position: chr1:6941208-6941659 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 35

Conread position: 66-516
Cow position: chr1:6958621-6959072 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 35

Conread position: 66-522
Cow position: chr1:34856887-34856425 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 87

Conread position: 66-522
Cow position: chr1:61736845-61737276 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 300
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 156, 39

Conread position: 66-523
Cow position: chr1:34685937-34686365 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 46

Conread position: 66-524
Cow position: chr1:19465804-19466237 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 108

Conread position: 66-527
Cow position: chr1:6165993-6166436 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 94

Conread position: 66-527
Cow position: chr1:12871267-12870806 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 66-527
Cow position: chr1:68818054-68817596 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 39

Conread position: 66-527
Cow position: chr1:70534192-70533753 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 105

Conread position: 66-534
Cow position: chr1:2765157-2765620 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 296
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 37

Conread position: 66-535
Cow position: chr1:57264244-57263783 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 321
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 35

Conread position: 66-535
Cow position: chr1:74947375-74946927 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 310
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 68

Conread position: 66-537
Cow position: chr1:61884657-61885126 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 195

Conread position: 66-548
Cow position: chr1:68827163-68826698 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 35

Conread position: 66-549
Cow position: chr1:197260-196781 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 66-549
Cow position: chr1:65103377-65103852 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 85

Conread position: 66-550
Cow position: chr1:37322264-37321782 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 66-552
Cow position: chr1:95765347-95764878 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 456, 175

Conread position: 67-456
Cow position: chr1:1165343-1165712 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 177

Conread position: 67-456
Cow position: chr1:3790313-3789944 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 101

Conread position: 67-517
Cow position: chr1:100761834-100762268 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 69

Conread position: 67-526
Cow position: chr1:93110882-93110429 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 67-527
Cow position: chr1:76470400-76470861 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 11, 96

Conread position: 67-544
Cow position: chr1:97820426-97820902 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 216

Conread position: 68-183
Cow position: chr1:98397472-98397359 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 34

Conread position: 68-196
Cow position: chr1:89262607-89262481 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 68-216
Cow position: chr1:4278611-4278757 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 6, 12

Conread position: 68-220
Cow position: chr1:61283770-61283927 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 33

Conread position: 68-225
Cow position: chr1:23577634-23577477 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 155

Conread position: 68-229
Cow position: chr1:6321953-6322110 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 46

Conread position: 68-229
Cow position: chr1:47427598-47427756 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 68-230
Cow position: chr1:75161136-75161298 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 37

Conread position: 68-262
Cow position: chr1:3757696-3757892 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 154, 110

Conread position: 68-264
Cow position: chr1:97806536-97806726 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 61

Conread position: 68-265
Cow position: chr1:76850980-76850787 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 34

Conread position: 68-297
Cow position: chr1:92551391-92551166 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 107

Conread position: 68-346
Cow position: chr1:12596159-12595885 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 68-372
Cow position: chr1:3035250-3034957 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 94

Conread position: 68-400
Cow position: chr1:75443672-75443361 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 229, 5

Conread position: 68-412
Cow position: chr1:92642695-92642367 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 25

Conread position: 68-457
Cow position: chr1:31390842-31390461 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 26

Conread position: 68-515
Cow position: chr1:4290900-4291347 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 68-517
Cow position: chr1:19145174-19144741 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 33

Conread position: 68-523
Cow position: chr1:22777809-22777362 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 305
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 106

Conread position: 68-524
Cow position: chr1:13413771-13414223 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 33

Conread position: 68-525
Cow position: chr1:16767343-16766884 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 226

Conread position: 69-229
Cow position: chr1:42728240-42728082 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 33

Conread position: 69-246
Cow position: chr1:40292221-40292049 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 33

Conread position: 69-255
Cow position: chr1:88970808-88970988 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 146, 32

Conread position: 69-334
Cow position: chr1:77657811-77658073 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 160, 32

Conread position: 69-335
Cow position: chr1:58419677-58419941 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 204

Conread position: 69-356
Cow position: chr1:24655705-24655984 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 157, 41

Conread position: 69-456
Cow position: chr1:52994769-52995152 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 32

Conread position: 69-475
Cow position: chr1:52956004-52956398 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 276
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 16

Conread position: 69-527
Cow position: chr1:70380401-70379962 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 96

Conread position: 70-234
Cow position: chr1:3872597-3872759 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 152, 101

Conread position: 70-240
Cow position: chr1:11984773-11984605 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 70-255
Cow position: chr1:67916782-67916966 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 36

Conread position: 70-266
Cow position: chr1:64160087-64160280 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 31

Conread position: 70-298
Cow position: chr1:85783272-85783496 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 155, 31

Conread position: 70-356
Cow position: chr1:29671778-29671495 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 112

Conread position: 70-362
Cow position: chr1:4679879-4680155 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 89

Conread position: 70-454
Cow position: chr1:42360012-42360412 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 201

Conread position: 70-535
Cow position: chr1:84812190-84811729 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 6

Conread position: 71-408
Cow position: chr1:55135582-55135914 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 41

Conread position: 71-533
Cow position: chr1:39427234-39426808 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 72-220
Cow position: chr1:85645153-85645005 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-258
Cow position: chr1:58196358-58196168 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 108

Conread position: 72-264
Cow position: chr1:31899783-31899594 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 50

Conread position: 72-303
Cow position: chr1:92048583-92048809 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 189, 93

Conread position: 72-500
Cow position: chr1:19516660-19516219 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 81

Conread position: 72-527
Cow position: chr1:50931221-50930776 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 79

Conread position: 72-535
Cow position: chr1:5597451-5597000 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 72

Conread position: 75-359
Cow position: chr1:3244601-3244879 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 99

Conread position: 76-440
Cow position: chr1:53423430-53423794 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 151, 226

Conread position: 77-220
Cow position: chr1:33986764-33986620 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 24

Conread position: 77-225
Cow position: chr1:37432066-37432211 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 24

Conread position: 77-227
Cow position: chr1:98741434-98741580 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 77-229
Cow position: chr1:30882562-30882418 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 77-246
Cow position: chr1:95071739-95071904 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 24

Conread position: 77-250
Cow position: chr1:10116043-10115864 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 77-260
Cow position: chr1:23905748-23905932 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 164, 0

Conread position: 77-262
Cow position: chr1:81363747-81363920 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 25

Conread position: 77-263
Cow position: chr1:74013514-74013322 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 133, 0

Conread position: 77-264
Cow position: chr1:3776861-3776674 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 141, 94

Conread position: 77-264
Cow position: chr1:28567685-28567495 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 25

Conread position: 77-264
Cow position: chr1:89395344-89395539 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 77-264
Cow position: chr1:98708195-98708378 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 147, 96

Conread position: 77-265
Cow position: chr1:13455896-13456084 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 105

Conread position: 77-265
Cow position: chr1:102469212-102469026 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 98

Conread position: 77-321
Cow position: chr1:37646248-37646011 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 82

Conread position: 77-342
Cow position: chr1:56657794-56658045 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 77-349
Cow position: chr1:50679533-50679260 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 96

Conread position: 77-359
Cow position: chr1:11770540-11770263 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 24

Conread position: 77-375
Cow position: chr1:49131369-49131066 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 257

Conread position: 77-405
Cow position: chr1:78791554-78791229 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 26, 90

Conread position: 77-412
Cow position: chr1:31414205-31413890 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 24

Conread position: 77-412
Cow position: chr1:86325858-86325524 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 144, 117

Conread position: 77-433
Cow position: chr1:81563486-81563848 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 53

Conread position: 77-441
Cow position: chr1:21835701-21836042 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 141, 88

Conread position: 77-444
Cow position: chr1:37707216-37706863 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 155

Conread position: 77-446
Cow position: chr1:7143096-7142735 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 94

Conread position: 77-454
Cow position: chr1:57637125-57637481 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 164, 94

Conread position: 77-456
Cow position: chr1:3137686-3138039 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 43

Conread position: 77-461
Cow position: chr1:28176753-28177135 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 25

Conread position: 77-462
Cow position: chr1:36931912-36932285 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 88

Conread position: 77-462
Cow position: chr1:47233722-47233346 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 94

Conread position: 77-462
Cow position: chr1:57900988-57900592 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 77-490
Cow position: chr1:24534490-24534094 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 86

Conread position: 77-524
Cow position: chr1:14379777-14379349 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 77-525
Cow position: chr1:10632806-10633242 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 104

Conread position: 77-526
Cow position: chr1:14098547-14098970 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 301
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 24

Conread position: 77-527
Cow position: chr1:70538356-70538810 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 203

Conread position: 77-532
Cow position: chr1:92197213-92197663 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 72

Conread position: 77-534
Cow position: chr1:52415206-52414773 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 303
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 24

Conread position: 77-534
Cow position: chr1:68619184-68618729 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 77-535
Cow position: chr1:56477348-56477795 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 24

Conread position: 77-535
Cow position: chr1:100450437-100449980 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 77-540
Cow position: chr1:31871173-31871626 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 307
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 141, 253

Conread position: 77-540
Cow position: chr1:74084436-74083971 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 25

Conread position: 77-546
Cow position: chr1:78857569-78857102 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 24

Conread position: 77-550
Cow position: chr1:6103160-6102673 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 48

Conread position: 77-551
Cow position: chr1:1185492-1185947 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 86, 96

Conread position: 77-552
Cow position: chr1:42138618-42139069 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 112

Conread position: 77-552
Cow position: chr1:102350005-102349525 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 116

Conread position: 78-233
Cow position: chr1:39718766-39718926 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 78-233
Cow position: chr1:78069718-78069567 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 78-264
Cow position: chr1:51531527-51531705 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 71

Conread position: 78-264
Cow position: chr1:99118139-99118327 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 180

Conread position: 78-265
Cow position: chr1:56408367-56408556 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 144, 0

Conread position: 78-265
Cow position: chr1:81277447-81277264 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 23

Conread position: 78-307
Cow position: chr1:26159678-26159445 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 146, 0

Conread position: 78-344
Cow position: chr1:102826059-102825803 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 146, 23

Conread position: 78-377
Cow position: chr1:57247190-57247482 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 96

Conread position: 78-391
Cow position: chr1:81319044-81319353 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 112, 23

Conread position: 78-397
Cow position: chr1:25087744-25087438 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 147

Conread position: 78-441
Cow position: chr1:81868973-81868619 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 98

Conread position: 78-453
Cow position: chr1:98594325-98594688 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 26

Conread position: 78-455
Cow position: chr1:71253801-71253431 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 96

Conread position: 78-456
Cow position: chr1:83583186-83582807 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 205

Conread position: 78-461
Cow position: chr1:95035600-95035222 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 140, 22

Conread position: 78-462
Cow position: chr1:92369470-92369866 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 78-524
Cow position: chr1:45555116-45555566 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 78-527
Cow position: chr1:51256789-51257199 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 297
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 52

Conread position: 78-532
Cow position: chr1:25793686-25793249 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 161

Conread position: 78-535
Cow position: chr1:59650020-59650463 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 300
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 75

Conread position: 79-220
Cow position: chr1:54117464-54117601 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 79-225
Cow position: chr1:94378787-94378929 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 71

Conread position: 79-234
Cow position: chr1:32955009-32954858 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 66

Conread position: 79-234
Cow position: chr1:81371917-81371764 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 145, 22

Conread position: 79-308
Cow position: chr1:6881470-6881243 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 95

Conread position: 79-326
Cow position: chr1:50634651-50634401 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 0

Conread position: 79-342
Cow position: chr1:75967191-75967443 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 145, 79

Conread position: 79-362
Cow position: chr1:95467584-95467300 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 32

Conread position: 79-390
Cow position: chr1:57396174-57395876 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 94

Conread position: 79-453
Cow position: chr1:84239352-84239000 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 105

Conread position: 79-516
Cow position: chr1:6077649-6078093 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 202

Conread position: 79-533
Cow position: chr1:90423331-90422891 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 167, 143

Conread position: 79-552
Cow position: chr1:71119266-71119751 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 65

Conread position: 80-222
Cow position: chr1:56618921-56618782 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 80-262
Cow position: chr1:51836327-51836506 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 85

Conread position: 80-265
Cow position: chr1:75833917-75833735 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 150, 86

Conread position: 80-357
Cow position: chr1:56643833-56643559 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 170, 85

Conread position: 80-544
Cow position: chr1:88618348-88618810 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 112

Conread position: 81-227
Cow position: chr1:43649777-43649644 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 81-409
Cow position: chr1:20002479-20002153 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 75

Conread position: 81-448
Cow position: chr1:5135934-5135591 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 21

Conread position: 81-462
Cow position: chr1:85162790-85162415 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 81-522
Cow position: chr1:93528447-93528893 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 213

Conread position: 81-527
Cow position: chr1:8919800-8919379 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 293
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 186, 20

Conread position: 81-549
Cow position: chr1:3924037-3923578 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 60

Conread position: 82-240
Cow position: chr1:62996253-62996408 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 142, 19

Conread position: 82-260
Cow position: chr1:27976366-27976537 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 103

Conread position: 82-503
Cow position: chr1:95056813-95057224 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 89

Conread position: 82-548
Cow position: chr1:19482316-19481876 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 83-444
Cow position: chr1:94403975-94404327 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 84

Conread position: 83-452
Cow position: chr1:24597411-24597774 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 116

Conread position: 83-458
Cow position: chr1:62732334-62732696 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 135, 97

Conread position: 83-551
Cow position: chr1:64189261-64189711 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 304
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 48, 92

Conread position: 83-552
Cow position: chr1:7442744-7443210 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 320
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 26

Conread position: 84-200
Cow position: chr1:86340749-86340636 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 84-264
Cow position: chr1:8869904-8869725 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 22

Conread position: 84-264
Cow position: chr1:30504231-30504409 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 17

Conread position: 84-310
Cow position: chr1:20287877-20288101 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 135, 18

Conread position: 84-368
Cow position: chr1:4573280-4573558 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 134, 104

Conread position: 84-389
Cow position: chr1:27980908-27980624 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 170, 89

Conread position: 84-416
Cow position: chr1:28284334-28284661 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 215
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 138

Conread position: 84-515
Cow position: chr1:71079193-71078770 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 22

Conread position: 84-532
Cow position: chr1:25281916-25281468 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 85-263
Cow position: chr1:70236532-70236351 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 63

Conread position: 85-453
Cow position: chr1:40531348-40530979 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 141, 35

Conread position: 85-516
Cow position: chr1:53328001-53327558 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 296
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 70

Conread position: 88-220
Cow position: chr1:58882246-58882119 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 88-222
Cow position: chr1:71715938-71716072 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 88-250
Cow position: chr1:65637968-65638133 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 88-251
Cow position: chr1:99222067-99221902 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 98

Conread position: 88-352
Cow position: chr1:71818698-71818440 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 135, 202

Conread position: 88-462
Cow position: chr1:1875159-1875519 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 71, 142

Conread position: 88-501
Cow position: chr1:51769849-51770273 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 130, 54

Conread position: 88-525
Cow position: chr1:102784724-102785148 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 101

Conread position: 88-531
Cow position: chr1:76096203-76096625 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 292
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 77

Conread position: 88-549
Cow position: chr1:51445643-51446109 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 85

Conread position: 88-552
Cow position: chr1:101834600-101835043 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 319
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 139, 61

Conread position: 89-235
Cow position: chr1:56232969-56233112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 89-240
Cow position: chr1:85865550-85865695 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 89-264
Cow position: chr1:19545334-19545161 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 137, 12

Conread position: 89-349
Cow position: chr1:25886310-25886056 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 135, 99

Conread position: 89-352
Cow position: chr1:51818706-51818964 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 129, 72

Conread position: 89-380
Cow position: chr1:31235169-31234884 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 182

Conread position: 89-412
Cow position: chr1:57297257-57297564 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 111, 12

Conread position: 89-426
Cow position: chr1:26729493-26729809 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 89-462
Cow position: chr1:49839271-49839616 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 83

Conread position: 89-527
Cow position: chr1:69678561-69678119 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 156

Conread position: 89-552
Cow position: chr1:55229749-55230199 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 83

Conread position: 90-527
Cow position: chr1:64302468-64302046 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 75

Conread position: 91-218
Cow position: chr1:88304089-88304212 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 91-404
Cow position: chr1:79278675-79278373 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 44

Conread position: 91-550
Cow position: chr1:69415949-69415499 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 11

Conread position: 92-258
Cow position: chr1:99543281-99543117 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 76

Conread position: 92-264
Cow position: chr1:20799640-20799823 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 92-325
Cow position: chr1:53411142-53410919 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 137, 69

Conread position: 92-342
Cow position: chr1:95050332-95050075 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 79

Conread position: 92-458
Cow position: chr1:85411347-85411704 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 128, 88

Conread position: 92-461
Cow position: chr1:24729072-24728709 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 174, 57

Conread position: 92-507
Cow position: chr1:22346803-22347227 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 263
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 126, 177

Conread position: 92-514
Cow position: chr1:43389280-43388863 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 76

Conread position: 92-525
Cow position: chr1:10655245-10655679 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 130, 194

Conread position: 92-525
Cow position: chr1:10942324-10941896 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 92-525
Cow position: chr1:10964062-10964490 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 92-541
Cow position: chr1:21934404-21933983 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 75

Conread position: 92-549
Cow position: chr1:3429741-3429292 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 72

Conread position: 92-552
Cow position: chr1:97611885-97611440 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 79

Conread position: 93-222
Cow position: chr1:53650659-53650788 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 13

Conread position: 93-229
Cow position: chr1:58341377-58341513 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 93-260
Cow position: chr1:101812506-101812348 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 93-375
Cow position: chr1:43448055-43447784 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 75

Conread position: 93-388
Cow position: chr1:73761583-73761295 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 124, 78

Conread position: 93-402
Cow position: chr1:72103614-72103922 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 81

Conread position: 93-463
Cow position: chr1:78809652-78810008 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 78

Conread position: 93-522
Cow position: chr1:31348672-31348239 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 78

Conread position: 93-527
Cow position: chr1:59518670-59519115 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 93-552
Cow position: chr1:70227933-70227461 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 94-266
Cow position: chr1:86484727-86484905 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 12

Conread position: 94-373
Cow position: chr1:62919946-62920211 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 138, 45

Conread position: 94-418
Cow position: chr1:68951401-68951713 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 67

Conread position: 94-552
Cow position: chr1:64804338-64803867 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 188

Conread position: 95-221
Cow position: chr1:98348535-98348410 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 95-252
Cow position: chr1:43219018-43219177 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 70

Conread position: 95-252
Cow position: chr1:98790408-98790563 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 49

Conread position: 95-265
Cow position: chr1:78750922-78750748 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 81

Conread position: 95-266
Cow position: chr1:34627465-34627300 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 79

Conread position: 95-433
Cow position: chr1:56634869-56635201 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 94

Conread position: 95-460
Cow position: chr1:89076865-89076503 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 95-498
Cow position: chr1:88926609-88926204 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 270
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 244, 66

Conread position: 95-515
Cow position: chr1:89381049-89381466 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 54

Conread position: 95-523
Cow position: chr1:18283268-18283662 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 284
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 95-532
Cow position: chr1:70434764-70435195 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 95-548
Cow position: chr1:81515010-81515461 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 161

Conread position: 95-550
Cow position: chr1:65664834-65665262 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 227, 44

Conread position: 95-552
Cow position: chr1:55705483-55705020 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 185

Conread position: 96-258
Cow position: chr1:87083437-87083597 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 82

Conread position: 96-369
Cow position: chr1:100512367-100512649 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 76

Conread position: 96-523
Cow position: chr1:29648633-29648201 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 106

Conread position: 96-524
Cow position: chr1:92010085-92010498 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 142

Conread position: 96-552
Cow position: chr1:4691364-4691813 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 308
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 43

Conread position: 97-264
Cow position: chr1:49753705-49753866 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 97-344
Cow position: chr1:4293835-4294071 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 74

Conread position: 97-352
Cow position: chr1:53540163-53540413 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 135

Conread position: 97-419
Cow position: chr1:7186560-7186877 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 175

Conread position: 97-543
Cow position: chr1:26200993-26201454 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 74

Conread position: 97-546
Cow position: chr1:14981346-14980914 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 52

Conread position: 98-220
Cow position: chr1:22790991-22791113 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 60

Conread position: 98-335
Cow position: chr1:78154951-78154718 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 83

Conread position: 98-461
Cow position: chr1:85593546-85593905 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 51

Conread position: 98-523
Cow position: chr1:15333655-15334088 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 7

Conread position: 98-528
Cow position: chr1:27145880-27145439 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 159

Conread position: 99-514
Cow position: chr1:679834-679417 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 274
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 119, 6

Conread position: 99-525
Cow position: chr1:87072479-87072896 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 72

Conread position: 100-268
Cow position: chr1:5061797-5061969 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 100-451
Cow position: chr1:15691113-15691453 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 277, 71

Conread position: 100-523
Cow position: chr1:81301319-81300902 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 71

Conread position: 100-523
Cow position: chr1:96472205-96472615 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 209

Conread position: 101-363
Cow position: chr1:71952864-71953109 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 70

Conread position: 101-527
Cow position: chr1:70422077-70422506 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 118, 172

Conread position: 102-264
Cow position: chr1:55194686-55194526 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 63

Conread position: 102-451
Cow position: chr1:43872553-43872199 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 11

Conread position: 102-527
Cow position: chr1:49317735-49317297 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 190

Conread position: 102-532
Cow position: chr1:34771726-34771290 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 61

Conread position: 103-444
Cow position: chr1:26702429-26702092 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 68

Conread position: 103-471
Cow position: chr1:93043804-93044162 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 142

Conread position: 103-513
Cow position: chr1:98030693-98031105 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 125

Conread position: 103-516
Cow position: chr1:11728956-11729365 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 178

Conread position: 104-468
Cow position: chr1:98461070-98461424 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 107

Conread position: 104-527
Cow position: chr1:7971210-7971608 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 63

Conread position: 105-263
Cow position: chr1:77168734-77168889 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 105-462
Cow position: chr1:53671969-53671618 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 245

Conread position: 105-524
Cow position: chr1:6305088-6304676 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 180

Conread position: 106-220
Cow position: chr1:6240390-6240500 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 81

Conread position: 106-257
Cow position: chr1:6240692-6240539 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 56

Conread position: 106-351
Cow position: chr1:98558002-98557763 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 159, 126

Conread position: 106-383
Cow position: chr1:98372407-98372685 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 177

Conread position: 106-454
Cow position: chr1:85867376-85867713 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 15

Conread position: 106-460
Cow position: chr1:16962232-16961882 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 178

Conread position: 106-524
Cow position: chr1:28678312-28678705 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 171, 9

Conread position: 107-535
Cow position: chr1:26179032-26178596 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 125, 144

Conread position: 108-266
Cow position: chr1:15627791-15627949 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 50

Conread position: 109-362
Cow position: chr1:68995956-68996212 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 187

Conread position: 109-456
Cow position: chr1:84910849-84910522 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 16, 81

Conread position: 109-527
Cow position: chr1:74956239-74955828 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 69

Conread position: 110-475
Cow position: chr1:19885170-19885525 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 130

Conread position: 110-547
Cow position: chr1:24542794-24542348 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 114-428
Cow position: chr1:17291853-17291540 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 202
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 128, 59

Conread position: 115-410
Cow position: chr1:86482694-86482984 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 160, 19

Conread position: 115-411
Cow position: chr1:63138629-63138922 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 64

Conread position: 116-241
Cow position: chr1:41290360-41290233 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 26

Conread position: 116-252
Cow position: chr1:51044402-51044540 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 116-262
Cow position: chr1:61385667-61385812 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 31

Conread position: 116-263
Cow position: chr1:41289971-41289820 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 116-333
Cow position: chr1:41954462-41954238 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 56

Conread position: 116-433
Cow position: chr1:62291894-62291598 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 47

Conread position: 116-451
Cow position: chr1:71643872-71643539 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 157

Conread position: 116-452
Cow position: chr1:100393373-100393041 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 152

Conread position: 116-514
Cow position: chr1:99512461-99512072 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 55

Conread position: 116-524
Cow position: chr1:75382783-75383164 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 116-537
Cow position: chr1:21955582-21955157 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 116-549
Cow position: chr1:5423943-5423506 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 77

Conread position: 117-412
Cow position: chr1:98310854-98311154 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 94, 181

Conread position: 117-462
Cow position: chr1:62036593-62036935 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 167

Conread position: 118-251
Cow position: chr1:99792605-99792740 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 118-252
Cow position: chr1:21500656-21500522 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 11

Conread position: 118-552
Cow position: chr1:70094131-70094568 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 178

Conread position: 119-343
Cow position: chr1:32013751-32013967 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 75

Conread position: 119-432
Cow position: chr1:6867686-6867364 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 143

Conread position: 119-437
Cow position: chr1:75141801-75142104 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 37

Conread position: 119-438
Cow position: chr1:101867150-101867457 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 52

Conread position: 119-535
Cow position: chr1:4414413-4414017 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 44

Conread position: 119-551
Cow position: chr1:96305174-96304748 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 298
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 22, 45

Conread position: 120-299
Cow position: chr1:82865027-82865208 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 10

Conread position: 120-400
Cow position: chr1:95654920-95654642 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 106, 135

Conread position: 120-461
Cow position: chr1:90976287-90975956 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 106, 48

Conread position: 120-527
Cow position: chr1:5858895-5858468 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 61

Conread position: 120-527
Cow position: chr1:68862831-68863223 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 43

Conread position: 121-264
Cow position: chr1:80438963-80438821 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 6

Conread position: 121-409
Cow position: chr1:86279211-86279492 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 53

Conread position: 122-377
Cow position: chr1:70028375-70028627 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 182

Conread position: 122-393
Cow position: chr1:69127370-69127103 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 68

Conread position: 122-548
Cow position: chr1:28563771-28563335 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 122-551
Cow position: chr1:46030555-46030134 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 49

Conread position: 123-262
Cow position: chr1:89438137-89438002 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 123-552
Cow position: chr1:43340824-43340400 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 182

Conread position: 124-252
Cow position: chr1:9463426-9463296 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 124-456
Cow position: chr1:94261347-94261661 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 104, 49

Conread position: 125-365
Cow position: chr1:81470929-81471168 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 170

Conread position: 125-551
Cow position: chr1:84906267-84905834 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 291
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 117, 48

Conread position: 126-404
Cow position: chr1:51654212-51654498 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 92, 43

Conread position: 127-359
Cow position: chr1:64421133-64421360 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 135

Conread position: 128-542
Cow position: chr1:40192874-40192481 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 31

Conread position: 129-409
Cow position: chr1:6788485-6788204 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 152

Conread position: 129-446
Cow position: chr1:89497770-89498062 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 129-526
Cow position: chr1:65025061-65025464 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 269
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 183

Conread position: 130-391
Cow position: chr1:82443651-82443394 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 43

Conread position: 130-476
Cow position: chr1:32001515-32001169 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 43

Conread position: 130-504
Cow position: chr1:96277249-96276873 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 131-516
Cow position: chr1:58754978-58754605 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 32

Conread position: 131-517
Cow position: chr1:49082529-49082940 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 91, 188

Conread position: 132-266
Cow position: chr1:83594000-83593863 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 28

Conread position: 132-322
Cow position: chr1:102113301-102113110 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 148

Conread position: 132-468
Cow position: chr1:97778802-97779129 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 82

Conread position: 132-547
Cow position: chr1:83072251-83072665 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 31

Conread position: 133-392
Cow position: chr1:24413248-24413511 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 148

Conread position: 133-412
Cow position: chr1:69004201-69004475 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 103

Conread position: 133-531
Cow position: chr1:724543-724947 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 74

Conread position: 133-551
Cow position: chr1:13810457-13810883 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 277
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 157

Conread position: 135-526
Cow position: chr1:71227887-71228298 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 251

Conread position: 136-409
Cow position: chr1:57880981-57880705 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 172

Conread position: 136-523
Cow position: chr1:33207063-33206674 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 133

Conread position: 136-524
Cow position: chr1:20581759-20582123 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 50

Conread position: 136-552
Cow position: chr1:54156929-54156504 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 27

Conread position: 137-535
Cow position: chr1:61742651-61742244 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 46

Conread position: 138-227
Cow position: chr1:82513770-82513681 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 138-293
Cow position: chr1:89082921-89083077 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 42

Conread position: 138-523
Cow position: chr1:63530394-63530759 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 307, 30

Conread position: 138-525
Cow position: chr1:42398383-42397994 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 264
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 85, 35

Conread position: 138-537
Cow position: chr1:61012123-61012522 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 84

Conread position: 140-374
Cow position: chr1:99039537-99039311 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 34

Conread position: 140-449
Cow position: chr1:75933088-75933385 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 34

Conread position: 140-452
Cow position: chr1:101836857-101837162 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 7

Conread position: 140-456
Cow position: chr1:86578764-86579088 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 34

Conread position: 140-543
Cow position: chr1:68763866-68763465 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 33

Conread position: 142-390
Cow position: chr1:24445811-24445568 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 23

Conread position: 144-410
Cow position: chr1:99062102-99061843 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 27

Conread position: 144-454
Cow position: chr1:101701827-101701523 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 29

Conread position: 144-456
Cow position: chr1:18780518-18780203 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 24

Conread position: 144-530
Cow position: chr1:89388151-89388550 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 145-412
Cow position: chr1:50345363-50345627 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 97

Conread position: 145-441
Cow position: chr1:60281187-60281484 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 123

Conread position: 145-532
Cow position: chr1:20667921-20667541 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 146-462
Cow position: chr1:91875090-91874785 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 38

Conread position: 146-549
Cow position: chr1:7752200-7752608 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 16, 162

Conread position: 147-418
Cow position: chr1:95178773-95179042 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 43

Conread position: 147-461
Cow position: chr1:57420907-57420605 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 13

Conread position: 148-532
Cow position: chr1:78096759-78097136 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 149-525
Cow position: chr1:24909226-24908841 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 20

Conread position: 149-537
Cow position: chr1:5278592-5278224 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 249
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 121

Conread position: 150-418
Cow position: chr1:70026521-70026257 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 17

Conread position: 150-535
Cow position: chr1:90621689-90621294 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 113

Conread position: 150-537
Cow position: chr1:42545958-42545585 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 75, 23

Conread position: 152-527
Cow position: chr1:76740858-76740468 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 37

Conread position: 152-548
Cow position: chr1:101632511-101632128 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 154-441
Cow position: chr1:12978506-12978793 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 143

Conread position: 154-453
Cow position: chr1:24876095-24876385 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 32

Conread position: 154-547
Cow position: chr1:2997773-2998157 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 11

Conread position: 155-438
Cow position: chr1:27380301-27380564 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 99

Conread position: 155-527
Cow position: chr1:20544122-20544471 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 113

Conread position: 156-456
Cow position: chr1:19568680-19568978 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 161, 57

Conread position: 156-545
Cow position: chr1:16061192-16060785 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 131

Conread position: 156-547
Cow position: chr1:55429128-55428726 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 113

Conread position: 159-411
Cow position: chr1:65905177-65904917 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 117

Conread position: 159-458
Cow position: chr1:75347451-75347751 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 154

Conread position: 159-469
Cow position: chr1:67305410-67305104 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 81

Conread position: 160-409
Cow position: chr1:9470566-9470318 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 119

Conread position: 160-532
Cow position: chr1:87095399-87095002 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 160-549
Cow position: chr1:101268172-101267775 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 255
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 38

Conread position: 160-552
Cow position: chr1:96081315-96081699 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 104

Conread position: 162-429
Cow position: chr1:43703242-43703508 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 9

Conread position: 162-465
Cow position: chr1:93554677-93554971 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 63, 108

Conread position: 163-454
Cow position: chr1:74927715-74928008 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 87

Conread position: 163-522
Cow position: chr1:24581418-24581766 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 87

Conread position: 163-524
Cow position: chr1:95557871-95558240 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 58, 83

Conread position: 163-527
Cow position: chr1:76613296-76612928 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 8

Conread position: 163-551
Cow position: chr1:86110897-86110517 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 119

Conread position: 164-429
Cow position: chr1:87211781-87212032 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 137, 0

Conread position: 164-527
Cow position: chr1:22525716-22526078 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 7

Conread position: 164-527
Cow position: chr1:38753753-38754121 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 164-527
Cow position: chr1:51417612-51417969 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 36

Conread position: 164-533
Cow position: chr1:24778148-24777774 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 7

Conread position: 164-535
Cow position: chr1:484630-484250 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 25

Conread position: 165-464
Cow position: chr1:97696577-97696878 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 138

Conread position: 166-441
Cow position: chr1:85647944-85647671 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 138

Conread position: 166-462
Cow position: chr1:3882627-3882327 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 143

Conread position: 166-462
Cow position: chr1:45553393-45553111 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 40

Conread position: 167-443
Cow position: chr1:38401631-38401912 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 209

Conread position: 167-516
Cow position: chr1:100324902-100324565 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 25

Conread position: 167-552
Cow position: chr1:46036121-46035712 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 264
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 261

Conread position: 168-359
Cow position: chr1:51684643-51684836 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 21

Conread position: 168-525
Cow position: chr1:14309198-14308827 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 238
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 150

Conread position: 169-418
Cow position: chr1:101946866-101946626 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 26

Conread position: 169-550
Cow position: chr1:42175565-42175956 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 128

Conread position: 169-552
Cow position: chr1:88913158-88913548 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 113

Conread position: 170-449
Cow position: chr1:98413608-98413891 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 63

Conread position: 171-533
Cow position: chr1:62519200-62519576 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 55, 72

Conread position: 173-527
Cow position: chr1:23512811-23512462 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 112

Conread position: 174-514
Cow position: chr1:17196783-17196434 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 174-519
Cow position: chr1:33409782-33409427 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 66

Conread position: 174-527
Cow position: chr1:14206310-14205960 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 120

Conread position: 174-552
Cow position: chr1:101866651-101866267 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 52, 105

Conread position: 175-483
Cow position: chr1:5579906-5580210 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 52

Conread position: 175-524
Cow position: chr1:41115868-41115535 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 120

Conread position: 175-527
Cow position: chr1:53369054-53369401 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 17

Conread position: 175-528
Cow position: chr1:4055283-4055650 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 16

Conread position: 175-534
Cow position: chr1:87197674-87198039 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 175-546
Cow position: chr1:86682716-86682344 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 109

Conread position: 176-527
Cow position: chr1:64572361-64572718 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 107

Conread position: 176-549
Cow position: chr1:22192611-22192995 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 177-550
Cow position: chr1:23186948-23186577 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 77

Conread position: 177-550
Cow position: chr1:35554753-35555144 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 232

Conread position: 178-515
Cow position: chr1:31272591-31272261 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 89

Conread position: 179-503
Cow position: chr1:91811638-91811962 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 89

Conread position: 179-540
Cow position: chr1:65318426-65318795 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 181-535
Cow position: chr1:91023615-91023256 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 126

Conread position: 183-524
Cow position: chr1:20950576-20950918 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 85

Conread position: 184-527
Cow position: chr1:8129111-8128774 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 47

Conread position: 185-407
Cow position: chr1:87440325-87440544 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 185-512
Cow position: chr1:2976138-2975800 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 25

Conread position: 186-458
Cow position: chr1:50045657-50045927 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 121

Conread position: 187-480
Cow position: chr1:86073453-86073750 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 91

Conread position: 188-517
Cow position: chr1:97090187-97090511 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 89

Conread position: 189-440
Cow position: chr1:89230367-89230121 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 189-527
Cow position: chr1:47886628-47886278 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 97

Conread position: 190-394
Cow position: chr1:85301280-85301481 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 90

Conread position: 190-524
Cow position: chr1:39225063-39224738 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 77, 91

Conread position: 190-524
Cow position: chr1:86057196-86056877 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 53

Conread position: 190-524
Cow position: chr1:89448759-89449099 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 91

Conread position: 190-547
Cow position: chr1:92997037-92996664 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 88

Conread position: 190-550
Cow position: chr1:24407025-24406691 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 191-532
Cow position: chr1:4243480-4243121 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 110

Conread position: 192-462
Cow position: chr1:41047436-41047170 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 192-524
Cow position: chr1:101860625-101860286 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 88

Conread position: 196-448
Cow position: chr1:85550210-85549960 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 100

Conread position: 196-547
Cow position: chr1:78838666-78839011 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 83

Conread position: 197-527
Cow position: chr1:26934392-26934064 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 71

Conread position: 197-535
Cow position: chr1:79640421-79640077 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 83

Conread position: 200-522
Cow position: chr1:69551613-69551281 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 47

Conread position: 200-552
Cow position: chr1:43311905-43311537 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 81

Conread position: 201-522
Cow position: chr1:72813485-72813817 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 110

Conread position: 202-453
Cow position: chr1:100569025-100569279 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 107

Conread position: 202-527
Cow position: chr1:42869062-42868746 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 20

Conread position: 202-548
Cow position: chr1:66898624-66898273 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 82

Conread position: 202-549
Cow position: chr1:72105287-72105623 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 7

Conread position: 203-393
Cow position: chr1:8984810-8984619 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 65

Conread position: 203-485
Cow position: chr1:6972406-6972678 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 203-532
Cow position: chr1:11172249-11172577 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 105

Conread position: 203-547
Cow position: chr1:4701798-4701447 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 99

Conread position: 203-549
Cow position: chr1:5010965-5010608 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 114

Conread position: 203-551
Cow position: chr1:35600423-35600064 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 95

Conread position: 204-552
Cow position: chr1:84104178-84103832 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 92

Conread position: 205-527
Cow position: chr1:73458212-73457890 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 223, 11

Conread position: 205-552
Cow position: chr1:47790787-47790442 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 61, 73

Conread position: 206-532
Cow position: chr1:20104146-20104475 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 206-535
Cow position: chr1:3607688-3608006 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 89

Conread position: 209-462
Cow position: chr1:9437428-9437158 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 69

Conread position: 209-532
Cow position: chr1:261598-261255 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 59

Conread position: 209-544
Cow position: chr1:77986542-77986196 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 99

Conread position: 212-454
Cow position: chr1:92989474-92989714 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 88

Conread position: 212-527
Cow position: chr1:56618765-56618452 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 212-552
Cow position: chr1:67919018-67919359 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 28

Conread position: 216-518
Cow position: chr1:98059937-98060254 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 106

Conread position: 216-527
Cow position: chr1:10716390-10716709 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 9, 48

Conread position: 216-544
Cow position: chr1:627852-628189 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 8

Conread position: 217-453
Cow position: chr1:3352802-3352577 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 217-456
Cow position: chr1:78697878-78697646 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 217-461
Cow position: chr1:7023011-7023252 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 217-462
Cow position: chr1:80422170-80422404 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 77

Conread position: 217-524
Cow position: chr1:67585439-67585752 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 198

Conread position: 217-527
Cow position: chr1:635794-635480 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 234, 78

Conread position: 217-544
Cow position: chr1:56225683-56226003 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 34

Conread position: 217-551
Cow position: chr1:42482094-42482425 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 187, 70

Conread position: 217-551
Cow position: chr1:43855192-43855515 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 66

Conread position: 217-552
Cow position: chr1:78794334-78794005 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 218-474
Cow position: chr1:48769694-48769946 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 21, 66

Conread position: 219-527
Cow position: chr1:100576147-100575837 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 62

Conread position: 219-547
Cow position: chr1:6394448-6394781 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 76

Conread position: 219-550
Cow position: chr1:90904861-90904530 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 66

Conread position: 220-437
Cow position: chr1:19227161-19226950 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 220-441
Cow position: chr1:6752334-6752120 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 46

Conread position: 223-456
Cow position: chr1:98511825-98512052 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 50

Conread position: 223-548
Cow position: chr1:98583660-98583973 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 43

Conread position: 224-544
Cow position: chr1:75250010-75250331 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 234, 20

Conread position: 224-551
Cow position: chr1:46030857-46031186 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 215, 65

Conread position: 224-552
Cow position: chr1:22823803-22824135 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 232, 26

Conread position: 225-456
Cow position: chr1:72356257-72356481 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 225-462
Cow position: chr1:67688682-67688451 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 79

Conread position: 225-525
Cow position: chr1:4391384-4391066 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 54

Conread position: 225-527
Cow position: chr1:71350824-71350520 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 226, 51

Conread position: 225-532
Cow position: chr1:42541495-42541800 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 225-537
Cow position: chr1:31795104-31794793 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 228, 23

Conread position: 225-552
Cow position: chr1:65028428-65028749 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 225-552
Cow position: chr1:81477971-81477632 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 25

Conread position: 226-452
Cow position: chr1:51044406-51044187 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 226-527
Cow position: chr1:82513456-82513148 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 79

Conread position: 227-525
Cow position: chr1:22944125-22943826 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 62

Conread position: 227-525
Cow position: chr1:27463032-27463330 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 27

Conread position: 227-535
Cow position: chr1:49825168-49824853 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 7

Conread position: 227-552
Cow position: chr1:91912221-91912563 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 175

Conread position: 228-444
Cow position: chr1:61543016-61542805 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 229-527
Cow position: chr1:17875808-17875509 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 69, 63

Conread position: 229-535
Cow position: chr1:30189049-30189368 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 55

Conread position: 229-551
Cow position: chr1:71666030-71665710 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 185, 46

Conread position: 232-456
Cow position: chr1:30418132-30417922 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 232-462
Cow position: chr1:45670544-45670764 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 50

Conread position: 232-552
Cow position: chr1:102306238-102305920 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 234-453
Cow position: chr1:80841560-80841769 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 235-452
Cow position: chr1:4581418-4581209 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 71, 31

Conread position: 236-535
Cow position: chr1:52467214-52467497 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 11

Conread position: 239-550
Cow position: chr1:95829203-95828908 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 206, 21

Conread position: 241-552
Cow position: chr1:69227535-69227220 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 139

Conread position: 244-448
Cow position: chr1:99793461-99793667 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 129

Conread position: 244-456
Cow position: chr1:50991852-50992060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 206, 26

Conread position: 244-462
Cow position: chr1:8347041-8347255 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 22

Conread position: 244-462
Cow position: chr1:95153137-95153354 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 48

Conread position: 245-403
Cow position: chr1:41695518-41695674 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 245-534
Cow position: chr1:3815772-3815469 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 19

Conread position: 248-409
Cow position: chr1:61560805-61560644 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 31

Conread position: 250-462
Cow position: chr1:68672676-68672470 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 270-527
Cow position: chr1:102529915-102529649 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 6, 32

Conread position: 271-462
Cow position: chr1:49153262-49153448 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 6

Conread position: 277-544
Cow position: chr1:101507309-101507570 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 278-552
Cow position: chr1:37695958-37695674 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 16

Conread position: 278-552
Cow position: chr1:50432536-50432253 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 28

Conread position: 278-552
Cow position: chr1:74751684-74751397 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 20

Conread position: 278-552
Cow position: chr1:81390868-81391149 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 46

Conread position: 280-406
Cow position: chr1:80904720-80904843 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 20

Conread position: 280-455
Cow position: chr1:5155266-5155094 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 26

Conread position: 280-455
Cow position: chr1:77232620-77232453 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 280-462
Cow position: chr1:84768926-84768747 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 13

Conread position: 280-472
Cow position: chr1:95974348-95974542 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 173

Conread position: 280-498
Cow position: chr1:37124079-37124302 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 21

Conread position: 280-511
Cow position: chr1:89158176-89157942 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 280-516
Cow position: chr1:64113841-64113607 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 170

Conread position: 280-523
Cow position: chr1:79146867-79146614 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 42

Conread position: 280-525
Cow position: chr1:97833663-97833899 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 0

Conread position: 280-526
Cow position: chr1:46143509-46143264 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 21

Conread position: 280-527
Cow position: chr1:52912945-52912688 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 280-527
Cow position: chr1:79135234-79135483 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 180, 86

Conread position: 280-535
Cow position: chr1:48206582-48206328 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 75

Conread position: 280-544
Cow position: chr1:3942257-3941996 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 176, 20

Conread position: 280-544
Cow position: chr1:80584384-80584648 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 15

Conread position: 280-545
Cow position: chr1:35671496-35671759 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 175, 21

Conread position: 280-551
Cow position: chr1:79003927-79004204 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 24

Conread position: 280-552
Cow position: chr1:52662221-52661947 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 22

Conread position: 281-443
Cow position: chr1:57090930-57091091 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 281-462
Cow position: chr1:86912393-86912572 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 281-527
Cow position: chr1:92590149-92590377 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 12, 21

Conread position: 281-547
Cow position: chr1:43286298-43286551 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 282-453
Cow position: chr1:98576001-98576170 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 282-456
Cow position: chr1:76658124-76657941 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 18

Conread position: 282-462
Cow position: chr1:46764829-46765009 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 18

Conread position: 282-462
Cow position: chr1:69481996-69481818 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 153, 0

Conread position: 282-462
Cow position: chr1:95072285-95072464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 282-516
Cow position: chr1:45223535-45223769 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 169, 20

Conread position: 282-519
Cow position: chr1:97717621-97717380 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 20

Conread position: 282-527
Cow position: chr1:62235492-62235252 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 17

Conread position: 282-527
Cow position: chr1:86688200-86687957 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 21

Conread position: 282-535
Cow position: chr1:57089728-57089468 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 145

Conread position: 282-535
Cow position: chr1:70175586-70175329 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 108, 13

Conread position: 282-535
Cow position: chr1:78066583-78066330 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 282-552
Cow position: chr1:38418983-38419255 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 172, 13

Conread position: 283-474
Cow position: chr1:30136398-30136206 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 161, 26

Conread position: 283-527
Cow position: chr1:71790193-71789944 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 21

Conread position: 284-532
Cow position: chr1:81481427-81481177 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 14

Conread position: 286-527
Cow position: chr1:62997756-62998006 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 168, 16

Conread position: 288-449
Cow position: chr1:42537367-42537203 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 26, 133

Conread position: 289-537
Cow position: chr1:82537897-82538142 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 16

Conread position: 290-456
Cow position: chr1:99221390-99221230 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 290-462
Cow position: chr1:816448-816278 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 15

Conread position: 290-527
Cow position: chr1:60044950-60045191 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 32

Conread position: 290-527
Cow position: chr1:77739681-77739929 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 142

Conread position: 291-549
Cow position: chr1:57053160-57053431 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 7

Conread position: 292-516
Cow position: chr1:2971877-2972113 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 292-543
Cow position: chr1:67654356-67654106 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 9

Conread position: 293-393
Cow position: chr1:80428148-80428048 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-527
Cow position: chr1:90267681-90267928 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 47

Conread position: 293-552
Cow position: chr1:92523977-92524245 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 127

Conread position: 294-463
Cow position: chr1:43312067-43311898 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 294-524
Cow position: chr1:33998722-33998950 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 22

Conread position: 294-527
Cow position: chr1:85771973-85772208 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 136, 225

Conread position: 294-539
Cow position: chr1:7908001-7908241 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 168, 0

Conread position: 295-462
Cow position: chr1:48214188-48214026 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 296-525
Cow position: chr1:52139669-52139426 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 132

Conread position: 297-448
Cow position: chr1:83618640-83618486 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 7

Conread position: 297-462
Cow position: chr1:81580146-81580309 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 297-532
Cow position: chr1:83900-84120 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 298-527
Cow position: chr1:79718779-79719012 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 21

Conread position: 298-551
Cow position: chr1:97144495-97144242 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 21

Conread position: 300-530
Cow position: chr1:27959580-27959340 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 74

Conread position: 300-532
Cow position: chr1:45575903-45576129 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 27

Conread position: 301-524
Cow position: chr1:63078981-63079202 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 162, 78

Conread position: 301-527
Cow position: chr1:6731150-6731383 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 301-527
Cow position: chr1:36688405-36688176 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 17

Conread position: 302-527
Cow position: chr1:6760062-6759840 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 37

Conread position: 302-537
Cow position: chr1:242529-242765 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 151, 229

Conread position: 303-528
Cow position: chr1:98467776-98468007 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 36

Conread position: 303-540
Cow position: chr1:17055967-17056207 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 75

Conread position: 303-545
Cow position: chr1:85688152-85688404 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 16

Conread position: 303-547
Cow position: chr1:13157158-13157418 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 14

Conread position: 304-524
Cow position: chr1:41027049-41027273 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 64

Conread position: 304-527
Cow position: chr1:5006136-5006348 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 304-527
Cow position: chr1:99322589-99322366 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 107

Conread position: 304-537
Cow position: chr1:102753828-102754064 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 14

Conread position: 304-548
Cow position: chr1:73020687-73020440 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 15

Conread position: 305-432
Cow position: chr1:60466201-60466331 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 305-469
Cow position: chr1:40935792-40935624 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 305-524
Cow position: chr1:73721335-73721565 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 119, 132

Conread position: 305-527
Cow position: chr1:3965811-3966033 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 165, 70

Conread position: 305-527
Cow position: chr1:15102864-15103088 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 40

Conread position: 305-527
Cow position: chr1:72092648-72092419 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 137, 124

Conread position: 305-530
Cow position: chr1:81582088-81582304 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 123

Conread position: 305-535
Cow position: chr1:55753240-55753008 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 305-552
Cow position: chr1:5637084-5636842 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 116

Conread position: 306-444
Cow position: chr1:33775667-33775532 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 98

Conread position: 306-456
Cow position: chr1:808845-808692 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 306-468
Cow position: chr1:36578494-36578655 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 16

Conread position: 306-522
Cow position: chr1:500151-500375 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 306-524
Cow position: chr1:6854328-6854118 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 306-525
Cow position: chr1:528095-527881 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 17

Conread position: 306-527
Cow position: chr1:8287654-8287426 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 144, 114

Conread position: 306-543
Cow position: chr1:97303273-97303032 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 72

Conread position: 306-548
Cow position: chr1:96599314-96599066 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 47

Conread position: 306-551
Cow position: chr1:1496555-1496299 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 6

Conread position: 308-532
Cow position: chr1:66752652-66752423 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 309-437
Cow position: chr1:82556430-82556305 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 309-456
Cow position: chr1:8670752-8670900 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 105

Conread position: 309-461
Cow position: chr1:71916140-71915989 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 309-463
Cow position: chr1:54157273-54157429 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 309-512
Cow position: chr1:31256244-31256041 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 33

Conread position: 309-515
Cow position: chr1:83025185-83024973 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 113, 137

Conread position: 309-516
Cow position: chr1:62034849-62034642 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 148, 87

Conread position: 309-516
Cow position: chr1:99071109-99071305 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 127

Conread position: 309-524
Cow position: chr1:30983513-30983291 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 40

Conread position: 309-524
Cow position: chr1:95618620-95618842 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 309-525
Cow position: chr1:22035590-22035810 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 0

Conread position: 309-527
Cow position: chr1:85818230-85818455 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 141, 112

Conread position: 309-527
Cow position: chr1:88359856-88360089 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 309-544
Cow position: chr1:54267958-54267715 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 57

Conread position: 309-544
Cow position: chr1:68127211-68126970 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 227

Conread position: 309-544
Cow position: chr1:83092854-83093083 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 155, 62

Conread position: 309-547
Cow position: chr1:93590607-93590368 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 194

Conread position: 309-548
Cow position: chr1:100823016-100823262 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 45

Conread position: 309-549
Cow position: chr1:98911987-98912234 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 125, 66

Conread position: 309-550
Cow position: chr1:72422429-72422177 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 144, 85

Conread position: 309-551
Cow position: chr1:88338646-88338876 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 309-551
Cow position: chr1:95835820-95835564 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 309-552
Cow position: chr1:23998956-23998695 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 87

Conread position: 309-552
Cow position: chr1:38706875-38706623 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 141, 197

Conread position: 310-524
Cow position: chr1:24530482-24530699 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 27

Conread position: 310-524
Cow position: chr1:49980690-49980909 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 75

Conread position: 310-527
Cow position: chr1:31819091-31819307 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 62

Conread position: 310-527
Cow position: chr1:74082002-74081797 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 137

Conread position: 310-532
Cow position: chr1:102468636-102468413 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 9

Conread position: 310-538
Cow position: chr1:19515639-19515402 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 310-544
Cow position: chr1:20871579-20871334 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 146, 0

Conread position: 311-429
Cow position: chr1:80442724-80442842 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 68

Conread position: 311-449
Cow position: chr1:31855266-31855128 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 311-522
Cow position: chr1:96558867-96558647 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 9

Conread position: 311-527
Cow position: chr1:81858921-81858697 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 311-550
Cow position: chr1:49334411-49334167 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 47

Conread position: 311-552
Cow position: chr1:76739928-76739685 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 22

Conread position: 311-552
Cow position: chr1:79630921-79630690 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 38

Conread position: 312-452
Cow position: chr1:45478877-45478741 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 312-453
Cow position: chr1:78068087-78067947 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 312-483
Cow position: chr1:19962035-19962209 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 63

Conread position: 312-547
Cow position: chr1:53452519-53452747 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 222, 91

Conread position: 312-552
Cow position: chr1:852152-852405 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 119

Conread position: 314-535
Cow position: chr1:45315652-45315419 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 314-539
Cow position: chr1:2462367-2462587 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 47

Conread position: 316-550
Cow position: chr1:51968522-51968753 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 182

Conread position: 318-462
Cow position: chr1:19304560-19304702 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 319-433
Cow position: chr1:83067058-83066944 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 319-519
Cow position: chr1:10674140-10674344 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 102

Conread position: 320-549
Cow position: chr1:14567645-14567419 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 17

Conread position: 321-460
Cow position: chr1:52429669-52429533 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 0

Conread position: 321-462
Cow position: chr1:10421699-10421837 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 321-513
Cow position: chr1:22461247-22461049 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 118, 104

Conread position: 321-524
Cow position: chr1:759427-759211 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 137, 0

Conread position: 321-524
Cow position: chr1:101439491-101439288 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 45

Conread position: 321-527
Cow position: chr1:5751304-5751519 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 321-527
Cow position: chr1:6790766-6790978 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 135, 17

Conread position: 321-527
Cow position: chr1:8788282-8788494 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 183

Conread position: 321-536
Cow position: chr1:68688574-68688792 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 321-551
Cow position: chr1:4444851-4444614 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 100

Conread position: 322-465
Cow position: chr1:68845177-68845035 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 322-532
Cow position: chr1:89158705-89158499 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 33

Conread position: 322-552
Cow position: chr1:41138152-41137919 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 323-438
Cow position: chr1:31598918-31599033 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 323-455
Cow position: chr1:97750626-97750494 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 323-456
Cow position: chr1:45874085-45873944 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 323-462
Cow position: chr1:3417341-3417487 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 323-462
Cow position: chr1:64019528-64019389 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 323-511
Cow position: chr1:69940830-69940636 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 323-511
Cow position: chr1:92032614-92032411 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 193

Conread position: 323-518
Cow position: chr1:61011174-61011370 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 323-522
Cow position: chr1:101280741-101280539 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 29

Conread position: 323-525
Cow position: chr1:97540628-97540841 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 323-526
Cow position: chr1:100474227-100474442 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 323-528
Cow position: chr1:51860568-51860359 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 323-537
Cow position: chr1:78079712-78079939 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 323-546
Cow position: chr1:21681544-21681310 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 106

Conread position: 323-552
Cow position: chr1:95152864-95153099 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 130, 216

Conread position: 324-525
Cow position: chr1:95516033-95516225 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 184, 128

Conread position: 324-532
Cow position: chr1:102648272-102648489 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 134, 0

Conread position: 324-544
Cow position: chr1:92075483-92075701 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 78

Conread position: 325-524
Cow position: chr1:6381767-6381977 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 130, 87

Conread position: 325-525
Cow position: chr1:32217238-32217440 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 24

Conread position: 325-527
Cow position: chr1:99605192-99604988 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 127, 177

Conread position: 325-551
Cow position: chr1:7793526-7793305 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 199, 49

Conread position: 325-551
Cow position: chr1:9637024-9637256 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 212

Conread position: 325-552
Cow position: chr1:40212337-40212116 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 54

Conread position: 326-537
Cow position: chr1:100852705-100852916 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 160

Conread position: 326-546
Cow position: chr1:102768177-102768396 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 134, 34

Conread position: 327-461
Cow position: chr1:83783933-83783798 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 327-522
Cow position: chr1:95156967-95156766 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 0

Conread position: 327-532
Cow position: chr1:48618247-48618038 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 328-527
Cow position: chr1:7965851-7966051 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 38

Conread position: 328-537
Cow position: chr1:101007431-101007221 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 53

Conread position: 329-532
Cow position: chr1:43499297-43499101 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 330-517
Cow position: chr1:23633932-23633733 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 103

Conread position: 330-524
Cow position: chr1:90595569-90595376 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 9

Conread position: 330-524
Cow position: chr1:100573627-100573427 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 330-527
Cow position: chr1:87220460-87220646 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 123, 55

Conread position: 330-532
Cow position: chr1:56913529-56913323 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 102

Conread position: 331-527
Cow position: chr1:101789088-101788893 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 30

Conread position: 331-546
Cow position: chr1:32014199-32014414 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 133, 16

Conread position: 332-471
Cow position: chr1:69185720-69185591 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 333-453
Cow position: chr1:32857035-32857161 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 333-456
Cow position: chr1:53640718-53640838 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 333-526
Cow position: chr1:85866163-85866338 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 333-527
Cow position: chr1:30948995-30949186 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 68

Conread position: 333-545
Cow position: chr1:42774914-42775128 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 17

Conread position: 335-455
Cow position: chr1:44269096-44269213 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 40

Conread position: 335-529
Cow position: chr1:71636320-71636122 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 89

Conread position: 336-550
Cow position: chr1:71946078-71945854 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 168

Conread position: 336-552
Cow position: chr1:70483328-70483108 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 199

Conread position: 338-499
Cow position: chr1:81179340-81179171 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 159

Conread position: 338-526
Cow position: chr1:100538548-100538729 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 156, 37

Conread position: 339-458
Cow position: chr1:55194237-55194119 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 339-461
Cow position: chr1:23055056-23055178 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 94

Conread position: 339-527
Cow position: chr1:524817-525010 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 104

Conread position: 339-542
Cow position: chr1:6836850-6836649 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 134

Conread position: 339-546
Cow position: chr1:12595567-12595362 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 108

Conread position: 339-546
Cow position: chr1:55685969-55685755 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 339-550
Cow position: chr1:98557112-98556893 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 200

Conread position: 340-514
Cow position: chr1:52370161-52369990 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 340-516
Cow position: chr1:76699021-76698856 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 340-532
Cow position: chr1:50585868-50585667 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 341-453
Cow position: chr1:84288414-84288526 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 341-516
Cow position: chr1:78793992-78793810 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 341-524
Cow position: chr1:101691891-101692076 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 41

Conread position: 341-527
Cow position: chr1:85622540-85622736 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 80

Conread position: 341-527
Cow position: chr1:87149804-87149612 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 341-537
Cow position: chr1:31340760-31340553 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 80

Conread position: 341-537
Cow position: chr1:63994544-63994341 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 341-539
Cow position: chr1:63460889-63461094 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 103, 0

Conread position: 341-545
Cow position: chr1:25022064-25021859 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 189

Conread position: 341-549
Cow position: chr1:34001058-34001265 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 199

Conread position: 341-550
Cow position: chr1:52450782-52450985 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 162

Conread position: 341-551
Cow position: chr1:1489391-1489176 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 31

Conread position: 341-552
Cow position: chr1:81364271-81364493 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 341-552
Cow position: chr1:81473166-81473387 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 84

Conread position: 342-512
Cow position: chr1:50329507-50329679 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 33

Conread position: 342-532
Cow position: chr1:19599349-19599151 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 89

Conread position: 342-550
Cow position: chr1:42152466-42152266 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 343-524
Cow position: chr1:79663424-79663252 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 343-552
Cow position: chr1:85339400-85339606 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 344-512
Cow position: chr1:69532509-69532337 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 344-526
Cow position: chr1:29671210-29671017 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 109, 167

Conread position: 344-527
Cow position: chr1:94823378-94823185 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 344-533
Cow position: chr1:76518436-76518634 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 81

Conread position: 344-536
Cow position: chr1:23969043-23968851 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 38

Conread position: 344-537
Cow position: chr1:15875674-15875871 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 39

Conread position: 344-546
Cow position: chr1:40303565-40303771 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 37

Conread position: 344-550
Cow position: chr1:70416746-70416531 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 344-550
Cow position: chr1:84815143-84815361 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 187

Conread position: 344-551
Cow position: chr1:73534627-73534416 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 76

Conread position: 345-527
Cow position: chr1:89835732-89835914 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 345-532
Cow position: chr1:59551451-59551648 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 19

Conread position: 345-548
Cow position: chr1:23101691-23101899 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 10

Conread position: 345-548
Cow position: chr1:64811251-64811459 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 101, 32

Conread position: 345-551
Cow position: chr1:87934254-87934052 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 345-552
Cow position: chr1:69378584-69378368 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 106, 85

Conread position: 345-552
Cow position: chr1:102730747-102730526 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 108, 0

Conread position: 346-541
Cow position: chr1:5872763-5872554 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 347-516
Cow position: chr1:40181608-40181428 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 347-516
Cow position: chr1:63905242-63905071 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 347-517
Cow position: chr1:81638565-81638733 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 151

Conread position: 347-522
Cow position: chr1:64960414-64960247 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 146, 25

Conread position: 347-524
Cow position: chr1:82336695-82336872 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 347-525
Cow position: chr1:54569715-54569903 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 347-527
Cow position: chr1:15628299-15628483 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 22

Conread position: 347-527
Cow position: chr1:58420220-58420402 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 44

Conread position: 347-527
Cow position: chr1:77685964-77685774 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 347-527
Cow position: chr1:84594905-84595095 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 347-532
Cow position: chr1:65030084-65030279 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 74

Conread position: 347-535
Cow position: chr1:76474540-76474347 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 81

Conread position: 347-536
Cow position: chr1:89298093-89297894 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 58

Conread position: 347-536
Cow position: chr1:89301702-89301503 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 58

Conread position: 347-537
Cow position: chr1:39684127-39683928 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 68

Conread position: 347-549
Cow position: chr1:49297668-49297876 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 189

Conread position: 347-552
Cow position: chr1:41022440-41022646 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 13

Conread position: 348-527
Cow position: chr1:32035692-32035510 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 103, 155

Conread position: 349-470
Cow position: chr1:99118466-99118585 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 53

Conread position: 349-525
Cow position: chr1:77857686-77857859 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 349-526
Cow position: chr1:4329881-4329706 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 26

Conread position: 349-546
Cow position: chr1:98605685-98605481 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 100

Conread position: 349-552
Cow position: chr1:83677305-83677095 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 350-491
Cow position: chr1:21957524-21957386 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 350-498
Cow position: chr1:28354577-28354720 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 350-523
Cow position: chr1:53651007-53651179 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 51

Conread position: 350-541
Cow position: chr1:4512003-4512187 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 31

Conread position: 350-549
Cow position: chr1:89437699-89437500 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 55

Conread position: 350-551
Cow position: chr1:67616779-67616992 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 81

Conread position: 351-494
Cow position: chr1:3061534-3061393 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 24

Conread position: 351-552
Cow position: chr1:11708997-11708797 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 105, 82

Conread position: 352-527
Cow position: chr1:70044377-70044548 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 352-549
Cow position: chr1:91796207-91796016 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 63

Conread position: 354-461
Cow position: chr1:39708287-39708394 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 354-462
Cow position: chr1:73494572-73494462 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 354-506
Cow position: chr1:81471379-81471534 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 48

Conread position: 354-516
Cow position: chr1:61134436-61134608 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 354-525
Cow position: chr1:100512921-100513099 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 21

Conread position: 354-527
Cow position: chr1:3679494-3679323 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 25

Conread position: 354-527
Cow position: chr1:45099783-45099962 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 354-527
Cow position: chr1:67674579-67674404 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 12

Conread position: 354-527
Cow position: chr1:97536314-97536482 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 354-532
Cow position: chr1:11770212-11770033 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 354-532
Cow position: chr1:100800745-100800559 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 354-537
Cow position: chr1:34324032-34323842 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 67

Conread position: 354-550
Cow position: chr1:20537229-20537431 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 354-551
Cow position: chr1:31801896-31801695 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 76

Conread position: 355-514
Cow position: chr1:1802192-1802361 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 355-517
Cow position: chr1:91743434-91743269 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 103, 20

Conread position: 355-530
Cow position: chr1:83683146-83682965 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 166

Conread position: 355-532
Cow position: chr1:77099095-77098918 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 91, 32

Conread position: 355-535
Cow position: chr1:42353186-42353357 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 355-546
Cow position: chr1:92187982-92188185 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 355-549
Cow position: chr1:6229973-6230169 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 133

Conread position: 355-549
Cow position: chr1:62469086-62469283 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 89, 24

Conread position: 355-552
Cow position: chr1:102523616-102523412 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 137

Conread position: 356-533
Cow position: chr1:98742048-98742226 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 100, 32

Conread position: 356-535
Cow position: chr1:90820451-90820268 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 102, 26

Conread position: 356-551
Cow position: chr1:69411671-69411469 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 139

Conread position: 357-481
Cow position: chr1:72811888-72812007 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 357-525
Cow position: chr1:94713138-94712961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 106, 86

Conread position: 358-552
Cow position: chr1:79178656-79178862 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 62

Conread position: 358-552
Cow position: chr1:99637226-99637023 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 181

Conread position: 359-516
Cow position: chr1:1799060-1799225 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 13

Conread position: 359-524
Cow position: chr1:73867152-73866995 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 359-536
Cow position: chr1:30028200-30028018 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 16

Conread position: 359-537
Cow position: chr1:77810731-77810549 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 147

Conread position: 362-537
Cow position: chr1:22828538-22828360 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 171

Conread position: 362-552
Cow position: chr1:90879704-90879510 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 157

Conread position: 363-527
Cow position: chr1:46354406-46354236 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 366-524
Cow position: chr1:84787306-84787461 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 366-524
Cow position: chr1:92363627-92363469 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 53

Conread position: 366-550
Cow position: chr1:89146838-89146648 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 16

Conread position: 367-527
Cow position: chr1:19384419-19384253 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 368-527
Cow position: chr1:10470464-10470626 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 368-545
Cow position: chr1:79170115-79169932 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 139

Conread position: 368-552
Cow position: chr1:53456849-53457038 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 24

Conread position: 369-524
Cow position: chr1:73644467-73644307 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 11

Conread position: 369-539
Cow position: chr1:96362388-96362223 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 77

Conread position: 370-551
Cow position: chr1:75227280-75227099 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 161

Conread position: 371-533
Cow position: chr1:40284598-40284437 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 82

Conread position: 371-545
Cow position: chr1:64516850-64516680 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 371-546
Cow position: chr1:71664856-71664670 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 372-524
Cow position: chr1:25955937-25956097 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 372-532
Cow position: chr1:53474198-53474357 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 31

Conread position: 372-549
Cow position: chr1:43379320-43379136 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 165

Conread position: 373-548
Cow position: chr1:37470544-37470715 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 165, 12

Conread position: 374-552
Cow position: chr1:3034155-3033980 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 56

Conread position: 375-527
Cow position: chr1:81354904-81354762 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 376-552
Cow position: chr1:5284186-5283999 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 166

Conread position: 378-546
Cow position: chr1:70464525-70464680 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 378-552
Cow position: chr1:81615702-81615880 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 125

Conread position: 379-527
Cow position: chr1:426334-426183 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 66

Conread position: 379-527
Cow position: chr1:2523012-2523168 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 11

Conread position: 380-533
Cow position: chr1:51794612-51794457 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 126

Conread position: 380-551
Cow position: chr1:69250484-69250661 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 51

Conread position: 383-527
Cow position: chr1:95976386-95976537 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 383-535
Cow position: chr1:80423679-80423520 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 137
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 384-524
Cow position: chr1:92578779-92578633 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 386-524
Cow position: chr1:85301753-85301880 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 387-551
Cow position: chr1:50906623-50906452 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 387-552
Cow position: chr1:39095545-39095713 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 121

Conread position: 389-546
Cow position: chr1:39703023-39703174 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 137, 62

Conread position: 392-527
Cow position: chr1:70476689-70476549 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 39

Conread position: 393-550
Cow position: chr1:32674894-32675044 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 394-552
Cow position: chr1:43377915-43378064 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 399-552
Cow position: chr1:45233060-45233212 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 404-532
Cow position: chr1:56107263-56107129 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 404-537
Cow position: chr1:34952317-34952450 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 21

Conread position: 406-546
Cow position: chr1:8778259-8778116 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 25

Conread position: 408-550
Cow position: chr1:99221555-99221408 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 138

Conread position: 409-527
Cow position: chr1:44501493-44501610 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 46

Conread position: 409-541
Cow position: chr1:43734520-43734388 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 16

Conread position: 409-551
Cow position: chr1:43052422-43052274 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 410-550
Cow position: chr1:12390393-12390257 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 51

Conread position: 422-527
Cow position: chr1:81355302-81355199 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 422-528
Cow position: chr1:52563345-52563239 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 85

Conread position: 422-541
Cow position: chr1:87989099-87988975 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 83

Conread position: 426-524
Cow position: chr1:102611623-102611723 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 428-535
Cow position: chr1:99119428-99119534 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.