Cow genome map

Conread name: Ss1.1-rfbs3925b_b2.5

Conread position: 25-1001
Cow position: chr12:24991785-24992761 (view UCSC Genome Browser custom track)
Alignm length: 977
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 743-1004
Cow position: chr12:29128043-29128303 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 759-1001
Cow position: chr12:758723-758482 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 18

Conread position: 762-1004
Cow position: chr12:15231333-15231093 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 0

Conread position: 762-1004
Cow position: chr12:46111819-46112059 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 764-1001
Cow position: chr12:36287719-36287951 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 765-1004
Cow position: chr12:14568518-14568756 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 765-1004
Cow position: chr12:15925457-15925693 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 766-999
Cow position: chr12:27435863-27436081 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 766-1000
Cow position: chr12:35367701-35367468 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 131

Conread position: 766-1001
Cow position: chr12:22202386-22202606 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 766-1004
Cow position: chr12:3716976-3717215 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 766-1004
Cow position: chr12:19040912-19040672 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 768-877
Cow position: chr12:34176848-34176740 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 768-891
Cow position: chr12:18936122-18936000 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 768-891
Cow position: chr12:43601963-43602085 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 768-893
Cow position: chr12:24205826-24205704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 9

Conread position: 768-895
Cow position: chr12:31261116-31261250 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 9

Conread position: 768-896
Cow position: chr12:15720269-15720396 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 768-912
Cow position: chr12:13042948-13043091 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 768-920
Cow position: chr12:21432634-21432482 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 111, 9

Conread position: 768-925
Cow position: chr12:2228864-2228707 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 150, 13

Conread position: 768-927
Cow position: chr12:31329036-31329195 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 9

Conread position: 768-933
Cow position: chr12:36445680-36445517 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 768-934
Cow position: chr12:23294528-23294363 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 768-939
Cow position: chr12:1093198-1093025 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 9

Conread position: 768-950
Cow position: chr12:22979600-22979779 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 768-950
Cow position: chr12:23159211-23159389 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 768-954
Cow position: chr12:41973479-41973665 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 152
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 9

Conread position: 768-965
Cow position: chr12:28571677-28571482 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 768-965
Cow position: chr12:36213571-36213376 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 768-966
Cow position: chr12:36569051-36569247 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 768-972
Cow position: chr12:24029189-24029389 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 136, 11

Conread position: 768-974
Cow position: chr12:10075953-10075750 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-977
Cow position: chr12:21452684-21452892 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-986
Cow position: chr12:25148325-25148541 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-997
Cow position: chr12:23378422-23378196 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 9

Conread position: 768-999
Cow position: chr12:25096972-25097202 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1000
Cow position: chr12:1438203-1437972 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1000
Cow position: chr12:12754863-12755094 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1000
Cow position: chr12:27506356-27506587 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:61914-62146 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:259023-258791 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:551521-551753 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:1511470-1511702 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:3180702-3180477 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:5107351-5107119 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:7674195-7673963 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:8674773-8675004 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:11101541-11101310 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:16302045-16302277 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:18585966-18585734 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:19155566-19155798 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1001
Cow position: chr12:20459426-20459657 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1001
Cow position: chr12:20994473-20994703 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 9

Conread position: 768-1001
Cow position: chr12:21314137-21314368 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1001
Cow position: chr12:21665429-21665197 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:21888749-21888981 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:27852648-27852883 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 9

Conread position: 768-1001
Cow position: chr12:27958232-27958464 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:27994394-27994162 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr12:31829156-31829388 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:32339963-32340195 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 768-1001
Cow position: chr12:32757990-32757758 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:33925404-33925636 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:35161902-35161669 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 768-1001
Cow position: chr12:35163058-35162825 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 768-1001
Cow position: chr12:42232603-42232371 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr12:42856237-42856470 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 9

Conread position: 768-1002
Cow position: chr12:1774631-1774857 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr12:6106061-6106288 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr12:14423643-14423410 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1002
Cow position: chr12:15797209-15796991 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr12:21251021-21251251 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr12:31027527-31027760 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 13

Conread position: 768-1003
Cow position: chr12:1408111-1407891 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position: chr12:2242694-2242927 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position: chr12:28763720-28763941 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:1056215-1056449 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr12:1405742-1405507 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:1476368-1476601 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:2285567-2285334 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 69

Conread position: 768-1004
Cow position: chr12:5110771-5111002 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:5226527-5226307 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:5713257-5713022 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1004
Cow position: chr12:8773957-8773724 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 9

Conread position: 768-1004
Cow position: chr12:8839547-8839311 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 13

Conread position: 768-1004
Cow position: chr12:9988392-9988628 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 768-1004
Cow position: chr12:10358989-10358754 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:11582453-11582228 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:12928617-12928848 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:15939572-15939803 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:17718594-17718359 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 768-1004
Cow position: chr12:21075129-21074895 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:21212077-21211842 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:21610896-21610662 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:21718884-21719118 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1004
Cow position: chr12:21862135-21862369 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1004
Cow position: chr12:21904652-21904425 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:22517559-22517793 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:22748509-22748273 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 768-1004
Cow position: chr12:23520869-23521104 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:24981013-24980780 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:25266040-25266274 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:27929498-27929733 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1004
Cow position: chr12:28012938-28013173 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:30687035-30686799 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 768-1004
Cow position: chr12:32011484-32011720 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 13

Conread position: 768-1004
Cow position: chr12:32147336-32147569 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:32848857-32848631 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1004
Cow position: chr12:34176658-34176423 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr12:35311619-35311854 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 9

Conread position: 768-1004
Cow position: chr12:35547835-35548068 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr12:37562298-37562068 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:38893657-38893422 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:39930462-39930227 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr12:42604889-42605117 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:43681298-43681063 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr12:45145346-45145111 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1008
Cow position: chr12:20847428-20847194 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1008
Cow position: chr12:41337939-41338178 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1018
Cow position: chr12:19871507-19871261 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 210

Conread position: 768-1018
Cow position: chr12:21484703-21484458 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1018
Cow position: chr12:22594063-22593812 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 768-1019
Cow position: chr12:32656842-32656595 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 238, 9

Conread position: 768-1020
Cow position: chr12:250027-250270 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 239, 9

Conread position: 769-1001
Cow position: chr12:1007309-1007077 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 769-1001
Cow position: chr12:33296925-33296690 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 213, 8

Conread position: 770-983
Cow position: chr12:21057417-21057632 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 143, 7

Conread position: 770-1004
Cow position: chr12:23138037-23138270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 781-1001
Cow position: chr12:10931366-10931147 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 783-998
Cow position: chr12:32901071-32900856 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 788-1001
Cow position: chr12:5327636-5327848 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 788-1001
Cow position: chr12:5776855-5777068 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 789-942
Cow position: chr12:21202064-21201912 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 66

Conread position: 792-965
Cow position: chr12:15820999-15820828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 132, 10

Conread position: 792-1004
Cow position: chr12:21303699-21303487 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 793-999
Cow position: chr12:17663230-17663024 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 9

Conread position: 794-974
Cow position: chr12:21497627-21497804 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 794-995
Cow position: chr12:17981668-17981477 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 794-995
Cow position: chr12:19198304-19198111 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 794-1000
Cow position: chr12:24557846-24557642 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 794-1002
Cow position: chr12:8841790-8841995 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 61

Conread position: 794-1002
Cow position: chr12:25313445-25313652 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 174, 0

Conread position: 794-1003
Cow position: chr12:32220369-32220158 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 85

Conread position: 794-1003
Cow position: chr12:40306567-40306358 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 163

Conread position: 795-986
Cow position: chr12:42795189-42795000 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 61, 114

Conread position: 800-1004
Cow position: chr12:47803433-47803230 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 102, 21

Conread position: 801-1003
Cow position: chr12:28737786-28737585 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 802-923
Cow position: chr12:45540402-45540283 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 802-1002
Cow position: chr12:23152484-23152673 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 802-1004
Cow position: chr12:30501901-30501699 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 803-936
Cow position: chr12:11559165-11559297 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 804-940
Cow position: chr12:4800819-4800955 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 805-1001
Cow position: chr12:22566292-22566097 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 805-1002
Cow position: chr12:1343708-1343514 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 7, 26

Conread position: 808-1004
Cow position: chr12:21391770-21391965 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 188, 36

Conread position: 809-1004
Cow position: chr12:27614669-27614474 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 810-955
Cow position: chr12:19861922-19861783 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 811-992
Cow position: chr12:29486219-29486401 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 138

Conread position: 812-1004
Cow position: chr12:23511927-23512120 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 816-1004
Cow position: chr12:1491413-1491225 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 819-974
Cow position: chr12:41288575-41288419 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 819-995
Cow position: chr12:35347845-35347675 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 819-1001
Cow position: chr12:8136747-8136927 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 163, 0

Conread position: 819-1001
Cow position: chr12:21010235-21010417 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 820-989
Cow position: chr12:1789402-1789571 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 142
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 820-1001
Cow position: chr12:42798250-42798068 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 21

Conread position: 827-998
Cow position: chr12:10164723-10164892 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 109

Conread position: 827-1004
Cow position: chr12:32088503-32088325 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 828-1001
Cow position: chr12:4830452-4830280 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 124

Conread position: 829-1019
Cow position: chr12:17969221-17969034 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 833-1003
Cow position: chr12:42193443-42193273 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 838-1003
Cow position: chr12:7077277-7077442 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 159, 60

Conread position: 838-1004
Cow position: chr12:1886135-1886293 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 839-1003
Cow position: chr12:1173780-1173950 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 82

Conread position: 841-1003
Cow position: chr12:6441620-6441782 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 845-1003
Cow position: chr12:4010964-4010805 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 853-1004
Cow position: chr12:35110961-35110812 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 854-1004
Cow position: chr12:10486677-10486525 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 871-1001
Cow position: chr12:34514460-34514590 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 875-1004
Cow position: chr12:24696733-24696604 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1004
Cow position: chr12:35473366-35473477 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 898-1001
Cow position: chr12:42194798-42194696 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 899-1001
Cow position: chr12:46163903-46163801 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.