Cow genome map
| Conread name: | Ss1.1-rfbs3925b_b2.5 |
| Conread position: | 159-1001 |
| Cow position: | chr25:8874846-8875688 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 134 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 762-912 |
| Cow position: | chr25:26850125-26850275 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 766-933 |
| Cow position: | chr25:22151192-22151024 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 766-1001 |
| Cow position: | chr25:35755156-35755392 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 766-1001 |
| Cow position: | chr25:41098104-41098345 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 766-1004 |
| Cow position: | chr25:11043706-11043469 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 766-1004 |
| Cow position: | chr25:20772247-20772478 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 81 |
| Conread position: | 767-994 |
| Cow position: | chr25:11665756-11665534 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 768-880 |
| Cow position: | chr25:35446034-35445923 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-896 |
| Cow position: | chr25:29357929-29358056 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-900 |
| Cow position: | chr25:17993058-17993189 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-908 |
| Cow position: | chr25:8655375-8655234 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 768-909 |
| Cow position: | chr25:27076068-27076208 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-916 |
| Cow position: | chr25:28275585-28275730 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 768-917 |
| Cow position: | chr25:34343824-34343971 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-919 |
| Cow position: | chr25:18330693-18330843 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-922 |
| Cow position: | chr25:39386746-39386899 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-923 |
| Cow position: | chr25:16922707-16922860 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-928 |
| Cow position: | chr25:26896135-26895977 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 768-930 |
| Cow position: | chr25:17554176-17554336 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-932 |
| Cow position: | chr25:11124849-11124686 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-932 |
| Cow position: | chr25:18486543-18486386 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-945 |
| Cow position: | chr25:2516091-2515913 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 20 |
| Conread position: | 768-945 |
| Cow position: | chr25:41353331-41353499 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 768-945 |
| Cow position: | chr25:41386008-41386181 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 768-947 |
| Cow position: | chr25:41367084-41367258 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 768-947 |
| Cow position: | chr25:41369066-41369241 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 768-947 |
| Cow position: | chr25:41391545-41391720 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 768-948 |
| Cow position: | chr25:33838466-33838287 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 768-949 |
| Cow position: | chr25:19923610-19923430 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-949 |
| Cow position: | chr25:40322207-40322385 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-956 |
| Cow position: | chr25:12756342-12756528 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 768-966 |
| Cow position: | chr25:35372530-35372727 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-970 |
| Cow position: | chr25:27231442-27231241 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-974 |
| Cow position: | chr25:25039344-25039144 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 768-980 |
| Cow position: | chr25:13960150-13959939 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-983 |
| Cow position: | chr25:34164478-34164688 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-985 |
| Cow position: | chr25:18269555-18269333 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 768-986 |
| Cow position: | chr25:13787057-13786840 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-986 |
| Cow position: | chr25:35589161-35588944 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-989 |
| Cow position: | chr25:6955151-6954931 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 13 |
| Conread position: | 768-989 |
| Cow position: | chr25:12082264-12082482 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-989 |
| Cow position: | chr25:37648513-37648295 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 768-1000 |
| Cow position: | chr25:15367820-15367592 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 768-1001 |
| Cow position: | chr25:6475371-6475603 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:7223349-7223580 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:12939124-12939356 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:17904723-17904491 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:18072309-18072087 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 768-1001 |
| Cow position: | chr25:18886398-18886630 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:19139489-19139721 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:20633844-20633618 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:24655091-24655318 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:26282108-26281876 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:26705799-26706031 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:28862955-28862722 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 13 |
| Conread position: | 768-1001 |
| Cow position: | chr25:29525784-29526010 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:31073513-31073745 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:34503139-34503371 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:35567802-35568032 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:35571902-35571671 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:41121087-41120860 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1001 |
| Cow position: | chr25:41356715-41356946 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 768-1002 |
| Cow position: | chr25:9395492-9395265 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 768-1002 |
| Cow position: | chr25:10012979-10013212 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 64 |
| Conread position: | 768-1002 |
| Cow position: | chr25:18490149-18489915 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 9 |
| Conread position: | 768-1002 |
| Cow position: | chr25:26922921-26922692 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1002 |
| Cow position: | chr25:29313237-29313463 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 768-1002 |
| Cow position: | chr25:32577579-32577812 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1003 |
| Cow position: | chr25:9957973-9958202 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 768-1003 |
| Cow position: | chr25:23740163-23740394 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:11896701-11896466 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:11955914-11955679 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:13430029-13430259 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:17562125-17561896 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:17585939-17586172 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:19337242-19337473 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:23325942-23326178 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 768-1004 |
| Cow position: | chr25:25480518-25480760 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 179, 9 |
| Conread position: | 768-1004 |
| Cow position: | chr25:26353701-26353936 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:26781003-26781234 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:26914315-26914085 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:26931179-26930944 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:27019155-27019389 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 768-1004 |
| Cow position: | chr25:33688124-33688366 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 768-1004 |
| Cow position: | chr25:34509096-34509331 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:34673503-34673723 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:35553750-35553518 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:35626146-35626384 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 768-1004 |
| Cow position: | chr25:36350821-36350588 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 768-1005 |
| Cow position: | chr25:23393956-23393720 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 9 |
| Conread position: | 768-1005 |
| Cow position: | chr25:33574649-33574879 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 768-1008 |
| Cow position: | chr25:21949881-21949643 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 9 |
| Conread position: | 768-1019 |
| Cow position: | chr25:29802662-29802910 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 768-1020 |
| Cow position: | chr25:18190293-18190540 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 9 |
| Conread position: | 768-1020 |
| Cow position: | chr25:19367612-19367863 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 768-1024 |
| Cow position: | chr25:32610337-32610581 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 769-930 |
| Cow position: | chr25:4372609-4372770 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 770-1026 |
| Cow position: | chr25:14756331-14756583 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 772-1004 |
| Cow position: | chr25:10136897-10136671 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 27 |
| Conread position: | 777-1004 |
| Cow position: | chr25:17657695-17657470 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 777-1004 |
| Cow position: | chr25:18474276-18474054 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 777-1004 |
| Cow position: | chr25:41135670-41135895 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 782-970 |
| Cow position: | chr25:37593476-37593284 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 783-1004 |
| Cow position: | chr25:18265265-18265044 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 787-1001 |
| Cow position: | chr25:24007973-24007759 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 788-1004 |
| Cow position: | chr25:40657589-40657376 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 789-995 |
| Cow position: | chr25:28420642-28420842 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 791-980 |
| Cow position: | chr25:19529332-19529143 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 172 |
| Conread position: | 792-1002 |
| Cow position: | chr25:3172339-3172549 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 792-1004 |
| Cow position: | chr25:25826508-25826302 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 794-983 |
| Cow position: | chr25:2594829-2594641 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 794-1004 |
| Cow position: | chr25:449740-449942 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 795-1003 |
| Cow position: | chr25:30112459-30112667 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 795-1004 |
| Cow position: | chr25:9647015-9646812 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 798-1001 |
| Cow position: | chr25:10633952-10634155 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 799-1000 |
| Cow position: | chr25:18129281-18129074 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 800-949 |
| Cow position: | chr25:18452355-18452205 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 800-1018 |
| Cow position: | chr25:25509925-25509709 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 802-949 |
| Cow position: | chr25:30340311-30340457 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 802-956 |
| Cow position: | chr25:12834303-12834458 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 802-971 |
| Cow position: | chr25:34667999-34667825 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 802-976 |
| Cow position: | chr25:23999133-23999307 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 802-993 |
| Cow position: | chr25:18208636-18208825 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 802-1003 |
| Cow position: | chr25:24303215-24303416 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 131, 136 |
| Conread position: | 802-1003 |
| Cow position: | chr25:35039838-35040034 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 802-1004 |
| Cow position: | chr25:393310-393118 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 38 |
| Conread position: | 802-1004 |
| Cow position: | chr25:11929499-11929700 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 803-1003 |
| Cow position: | chr25:23672816-23673012 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 820-936 |
| Cow position: | chr25:23913703-23913588 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 820-949 |
| Cow position: | chr25:30810962-30810833 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 820-1001 |
| Cow position: | chr25:21070824-21071004 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 149 |
| Conread position: | 820-1003 |
| Cow position: | chr25:13941706-13941889 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 820-1003 |
| Cow position: | chr25:14961826-14962014 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 822-992 |
| Cow position: | chr25:30705607-30705773 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 822-1003 |
| Cow position: | chr25:16523105-16522926 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 176, 55 |
| Conread position: | 825-1004 |
| Cow position: | chr25:14790234-14790056 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 828-1021 |
| Cow position: | chr25:22479953-22480146 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 184 |
| Conread position: | 831-1003 |
| Cow position: | chr25:3373618-3373793 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 833-1001 |
| Cow position: | chr25:25731557-25731391 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 833-1003 |
| Cow position: | chr25:14618995-14619163 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 837-1003 |
| Cow position: | chr25:23773235-23773396 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 837-1004 |
| Cow position: | chr25:21903465-21903298 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 838-1007 |
| Cow position: | chr25:30128807-30128977 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 839-998 |
| Cow position: | chr25:24637131-24637289 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 840-1002 |
| Cow position: | chr25:12865791-12865628 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 843-1003 |
| Cow position: | chr25:37468849-37468692 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 844-1007 |
| Cow position: | chr25:26753312-26753476 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 852-1001 |
| Cow position: | chr25:34257106-34257255 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-1001 |
| Cow position: | chr25:22197405-22197535 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-1004 |
| Cow position: | chr25:10704438-10704304 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 883-1013 |
| Cow position: | chr25:20073635-20073504 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 884-1003 |
| Cow position: | chr25:24205142-24205262 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.