Cow genome map

Conread name: Ss1.1-rfbs3925b_b2.5

Conread position: 763-1019
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 765-1001
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 766-923
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 127

Conread position: 766-936
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 766-967
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 766-1001
Cow position:
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 766-1004
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 71

Conread position: 766-1004
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 768-871
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 768-877
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 768-877
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 768-908
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 768-911
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 768-912
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 768-916
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 768-918
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 768-921
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 768-923
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 768-926
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 9

Conread position: 768-938
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 768-949
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 768-954
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 9

Conread position: 768-958
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 768-970
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 187, 17

Conread position: 768-974
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 768-977
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 768-979
Cow position:
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-983
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-983
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 17

Conread position: 768-986
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-989
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 39, 9

Conread position: 768-995
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 768-999
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 768-999
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-999
Cow position:
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1002
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1002
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 157, 21

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 768-1004
Cow position:
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 9

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 239
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 9

Conread position: 768-1004
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 13

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 9

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 13

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1010
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 15

Conread position: 768-1016
Cow position:
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 769-971
Cow position:
Alignm length: 203
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 769-1004
Cow position:
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 771-1004
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 773-1004
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 777-1004
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 781-964
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 19

Conread position: 781-968
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 781-986
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 781-1001
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 781-1004
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 107, 45

Conread position: 783-947
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 27

Conread position: 788-999
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 115, 82

Conread position: 789-1002
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 790-996
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 204, 127

Conread position: 791-944
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 792-918
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 794-1003
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 57

Conread position: 794-1004
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 132, 81

Conread position: 794-1004
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 794-1004
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 794-1018
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 123, 184

Conread position: 795-990
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 795-992
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 795-995
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 73, 107

Conread position: 795-1019
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 218

Conread position: 799-1004
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 800-1004
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 10

Conread position: 802-935
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 802-1001
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 802-1003
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 802-1003
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 26

Conread position: 802-1004
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 802-1004
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 132, 138

Conread position: 803-1000
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 805-1002
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 58

Conread position: 808-1004
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 809-995
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 100

Conread position: 809-1003
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 810-1004
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 31

Conread position: 817-1004
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 821-1004
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 821-1020
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 822-1023
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 179, 94

Conread position: 824-979
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 824-1004
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 67

Conread position: 826-1004
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 827-1004
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 828-1002
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 56

Conread position: 832-1004
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 131, 0

Conread position: 838-1002
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 839-989
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 839-1004
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 95

Conread position: 841-954
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 842-974
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 855-1004
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 888-1001
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.