Cow genome map

Conread name: Ss1.1-rfbs3925b_b2.5

Conread position: 766-948
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 71

Conread position: 766-1001
Cow position:
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 118

Conread position: 766-1002
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 766-1004
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 140

Conread position: 766-1018
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 62

Conread position: 766-1020
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 49

Conread position: 768-918
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 768-918
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 768-923
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 9

Conread position: 768-926
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 768-945
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 768-949
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 768-949
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 169, 9

Conread position: 768-949
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 768-970
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 768-972
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 9

Conread position: 768-984
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-985
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 768-991
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 768-999
Cow position:
Alignm length: 232
Alignm identity: 147
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 9

Conread position: 768-1001
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 9

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position:
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position:
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 768-1002
Cow position:
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 768-1002
Cow position:
Alignm length: 235
Alignm identity: 150
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1002
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position:
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 768-1003
Cow position:
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 239
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 177, 13

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position:
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 14

Conread position: 768-1004
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1005
Cow position:
Alignm length: 239
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 9

Conread position: 768-1019
Cow position:
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 769-1000
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 769-1003
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 772-926
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 777-1001
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 115

Conread position: 777-1005
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 781-927
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 781-1002
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 56

Conread position: 781-1004
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 129, 0

Conread position: 783-982
Cow position:
Alignm length: 200
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1001
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1020
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 55, 19

Conread position: 788-1002
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 788-1014
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 224, 83

Conread position: 791-1004
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 46

Conread position: 793-970
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 793-1001
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 40

Conread position: 794-983
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 794-995
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 794-1003
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 794-1003
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 84

Conread position: 794-1004
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 794-1004
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 113, 0

Conread position: 794-1018
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 8

Conread position: 795-1003
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 797-961
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 107

Conread position: 797-1004
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 797-1004
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 119, 85

Conread position: 800-984
Cow position:
Alignm length: 186
Alignm identity: 151
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 148, 0

Conread position: 800-1001
Cow position:
Alignm length: 202
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 800-1003
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 144

Conread position: 802-986
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 136

Conread position: 802-1002
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 27, 142

Conread position: 802-1003
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 802-1004
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 802-1004
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 125

Conread position: 803-964
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 803-1003
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 808-1004
Cow position:
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 814-1001
Cow position:
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 817-1003
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 819-1002
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 819-1003
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 821-1004
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 821-1021
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 178, 77

Conread position: 832-1003
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 835-980
Cow position:
Alignm length: 146
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 837-980
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 837-1001
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 837-1004
Cow position:
Alignm length: 168
Alignm identity: 140
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 148, 0

Conread position: 837-1004
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 837-1032
Cow position:
Alignm length: 196
Alignm identity: 124
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 838-1003
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 840-1003
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 840-1021
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 74

Conread position: 843-987
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 53

Conread position: 849-1003
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 858-961
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 872-1001
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 883-1001
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 898-1001
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 911-1004
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.