Cow genome map

Conread name: Ss1.1-rfbs3925b_b2.5

Conread position: 765-916
Cow position: chr29:32643882-32643730 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 17

Conread position: 765-1001
Cow position: chr29:2103161-2102926 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 766-877
Cow position: chr29:34806507-34806619 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 766-901
Cow position: chr29:13128722-13128588 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 766-987
Cow position: chr29:16170231-16170453 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 23

Conread position: 766-1001
Cow position: chr29:8623893-8624117 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 96

Conread position: 766-1001
Cow position: chr29:10644099-10644332 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 77

Conread position: 766-1001
Cow position: chr29:28697064-28697299 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 173

Conread position: 766-1003
Cow position: chr29:6934796-6934569 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 766-1003
Cow position: chr29:9079482-9079722 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 766-1004
Cow position: chr29:21227290-21227052 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 766-1004
Cow position: chr29:42807301-42807067 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 105

Conread position: 768-875
Cow position: chr29:10032343-10032449 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 768-892
Cow position: chr29:5785805-5785682 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 768-892
Cow position: chr29:5787181-5787304 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 768-901
Cow position: chr29:16097123-16096991 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 768-903
Cow position: chr29:21167580-21167450 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 768-912
Cow position: chr29:32316380-32316238 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 9

Conread position: 768-923
Cow position: chr29:27259573-27259728 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 9

Conread position: 768-923
Cow position: chr29:32352906-32352754 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 768-926
Cow position: chr29:34851069-34850911 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 9

Conread position: 768-926
Cow position: chr29:40116615-40116458 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 768-933
Cow position: chr29:11119401-11119565 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 768-934
Cow position: chr29:26262933-26262768 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 768-934
Cow position: chr29:35002363-35002528 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 768-945
Cow position: chr29:29506064-29506239 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 72

Conread position: 768-947
Cow position: chr29:26289992-26290166 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 768-949
Cow position: chr29:2401999-2401819 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 768-954
Cow position: chr29:27007197-27007021 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 768-957
Cow position: chr29:24983256-24983444 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 768-963
Cow position: chr29:5961314-5961122 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 768-965
Cow position: chr29:19657192-19656999 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 177, 9

Conread position: 768-966
Cow position: chr29:14313838-14314035 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-970
Cow position: chr29:16185468-16185669 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-971
Cow position: chr29:1688059-1687857 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-973
Cow position: chr29:5978009-5978211 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 768-976
Cow position: chr29:14037538-14037742 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 768-987
Cow position: chr29:9639218-9639437 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 9

Conread position: 768-989
Cow position: chr29:23980021-23979802 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-995
Cow position: chr29:19397799-19397572 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 768-999
Cow position: chr29:40618544-40618769 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1000
Cow position: chr29:45153-45382 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1000
Cow position: chr29:38229318-38229087 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:2463561-2463793 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:2484219-2483987 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:2838025-2838257 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:3329903-3329671 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:4200689-4200457 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:5240707-5240473 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 9

Conread position: 768-1001
Cow position: chr29:6262698-6262930 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:10452505-10452736 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:10820404-10820636 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:13099483-13099249 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 768-1001
Cow position: chr29:14208256-14208481 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:15072170-15072402 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:15699623-15699391 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:16101807-16102038 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:18010886-18010654 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:19619958-19620189 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:20254475-20254246 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:21474460-21474228 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:22279684-22279453 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:22746211-22745979 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:24806766-24806534 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 13

Conread position: 768-1001
Cow position: chr29:25929197-25929430 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 9

Conread position: 768-1001
Cow position: chr29:32515639-32515407 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:32543449-32543217 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:34794552-34794784 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:38350049-38350276 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 9

Conread position: 768-1001
Cow position: chr29:38746359-38746127 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:40157055-40156823 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:40294618-40294386 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:40498565-40498796 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr29:42255667-42255899 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr29:43326825-43326593 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr29:13058049-13057823 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1002
Cow position: chr29:16065021-16064789 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr29:19890879-19890646 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1002
Cow position: chr29:32800586-32800354 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 9

Conread position: 768-1003
Cow position: chr29:7664688-7664924 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 17

Conread position: 768-1003
Cow position: chr29:7811886-7812120 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position: chr29:12797893-12797661 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1003
Cow position: chr29:13849633-13849871 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 768-1003
Cow position: chr29:16347510-16347283 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1003
Cow position: chr29:35265228-35264994 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1003
Cow position: chr29:45462544-45462310 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:607337-607561 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:727040-726805 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:1478762-1478528 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:2307311-2307078 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:4163999-4163764 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:6218497-6218730 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:6871970-6872198 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 768-1004
Cow position: chr29:7427831-7428066 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:7701079-7701309 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 226, 17

Conread position: 768-1004
Cow position: chr29:7847703-7847465 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 13

Conread position: 768-1004
Cow position: chr29:10237356-10237594 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 200, 17

Conread position: 768-1004
Cow position: chr29:10846267-10846032 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:13585526-13585292 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:13624063-13624298 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:15117515-15117750 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:15941715-15941950 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 17

Conread position: 768-1004
Cow position: chr29:15966243-15966478 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:16036106-16036341 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:17408442-17408208 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 768-1004
Cow position: chr29:19515034-19515268 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 768-1004
Cow position: chr29:21429549-21429784 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:27702388-27702153 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:28657057-28657292 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:30432882-30433116 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:31094274-31094510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 768-1004
Cow position: chr29:31184687-31184452 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:31765351-31765116 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:32291905-32291669 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 13

Conread position: 768-1004
Cow position: chr29:32556433-32556668 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr29:35739390-35739614 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 77, 9

Conread position: 768-1004
Cow position: chr29:35955992-35956226 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:38409508-38409269 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 768-1004
Cow position: chr29:39076408-39076642 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr29:45651231-45651474 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 23, 9

Conread position: 768-1007
Cow position: chr29:26161522-26161761 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 9

Conread position: 768-1012
Cow position: chr29:2745193-2745430 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 238, 9

Conread position: 768-1020
Cow position: chr29:24577964-24577712 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 128, 14

Conread position: 768-1039
Cow position: chr29:34780675-34780946 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 9

Conread position: 768-1050
Cow position: chr29:27976694-27976974 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 769-947
Cow position: chr29:29571333-29571157 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 769-1004
Cow position: chr29:11786312-11786079 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 769-1004
Cow position: chr29:36634039-36634274 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 8

Conread position: 769-1020
Cow position: chr29:13027530-13027282 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 237, 9

Conread position: 770-1004
Cow position: chr29:32732410-32732176 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 7

Conread position: 771-1000
Cow position: chr29:321106-321338 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 17

Conread position: 777-1004
Cow position: chr29:17138411-17138184 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 777-1004
Cow position: chr29:32289688-32289467 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 778-989
Cow position: chr29:27857872-27857663 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 107, 24

Conread position: 778-1002
Cow position: chr29:21255253-21255040 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 778-1004
Cow position: chr29:35280828-35281039 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 0

Conread position: 780-1004
Cow position: chr29:7604689-7604468 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 23

Conread position: 781-1001
Cow position: chr29:35273740-35273960 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 781-1001
Cow position: chr29:45207807-45207590 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 781-1003
Cow position: chr29:40954596-40954818 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1000
Cow position: chr29:14839317-14839100 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 783-1001
Cow position: chr29:407967-408185 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 787-1003
Cow position: chr29:45626633-45626418 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 210, 136

Conread position: 788-1001
Cow position: chr29:2693732-2693524 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 160, 0

Conread position: 788-1003
Cow position: chr29:34331136-34331352 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 788-1004
Cow position: chr29:19524998-19525213 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 788-1004
Cow position: chr29:44020805-44021014 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 110

Conread position: 794-1002
Cow position: chr29:36208982-36208775 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 0

Conread position: 794-1003
Cow position: chr29:4864605-4864403 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 794-1004
Cow position: chr29:17153523-17153321 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 795-1004
Cow position: chr29:34737408-34737617 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 32

Conread position: 798-1000
Cow position: chr29:8666934-8666742 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 35

Conread position: 802-945
Cow position: chr29:3712258-3712119 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 802-987
Cow position: chr29:13129353-13129529 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 802-989
Cow position: chr29:14454501-14454325 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 802-997
Cow position: chr29:16052078-16052272 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 802-1001
Cow position: chr29:2886405-2886597 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 802-1001
Cow position: chr29:11365296-11365099 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 802-1004
Cow position: chr29:649328-649128 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 802-1004
Cow position: chr29:2430367-2430169 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 802-1004
Cow position: chr29:32962593-32962390 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 122, 0

Conread position: 802-1005
Cow position: chr29:3584934-3585137 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 802-1011
Cow position: chr29:10652032-10651824 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 205, 72

Conread position: 802-1018
Cow position: chr29:7723944-7723738 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 191, 61

Conread position: 802-1018
Cow position: chr29:29589718-29589927 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 802-1019
Cow position: chr29:21535642-21535850 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 804-1004
Cow position: chr29:43964284-43964480 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 28

Conread position: 808-1002
Cow position: chr29:27310380-27310574 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 809-1001
Cow position: chr29:12194619-12194427 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 815-1004
Cow position: chr29:6860468-6860657 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 11

Conread position: 817-963
Cow position: chr29:10159453-10159598 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 817-982
Cow position: chr29:35227929-35227767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 817-1002
Cow position: chr29:16012911-16013093 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 818-989
Cow position: chr29:21325882-21326050 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 819-1003
Cow position: chr29:254148-253962 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 820-1002
Cow position: chr29:2485534-2485716 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 43

Conread position: 820-1002
Cow position: chr29:4489763-4489582 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 820-1003
Cow position: chr29:18413236-18413053 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 8

Conread position: 821-1004
Cow position: chr29:29702143-29702326 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 161

Conread position: 821-1007
Cow position: chr29:799430-799616 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 76

Conread position: 822-1003
Cow position: chr29:34121249-34121425 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 826-1001
Cow position: chr29:34524068-34524243 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 828-975
Cow position: chr29:18399521-18399375 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 828-995
Cow position: chr29:959848-959682 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 832-1002
Cow position: chr29:18361349-18361518 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 31

Conread position: 836-1004
Cow position: chr29:29599939-29600107 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 50

Conread position: 837-1003
Cow position: chr29:32893957-32893791 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 838-1003
Cow position: chr29:21546511-21546678 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 61

Conread position: 838-1003
Cow position: chr29:29615866-29616028 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 838-1003
Cow position: chr29:43552541-43552706 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 60

Conread position: 839-1003
Cow position: chr29:21614510-21614347 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 839-1003
Cow position: chr29:35261131-35260967 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 96

Conread position: 839-1003
Cow position: chr29:38247940-38248101 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 840-954
Cow position: chr29:11003195-11003080 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 841-1005
Cow position: chr29:27813920-27813766 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 842-1001
Cow position: chr29:5339852-5340010 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 96

Conread position: 845-1020
Cow position: chr29:3169627-3169795 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 161, 39

Conread position: 854-999
Cow position: chr29:4217539-4217396 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 859-998
Cow position: chr29:35076184-35076045 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 870-995
Cow position: chr29:43728833-43728708 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 875-1004
Cow position: chr29:34806819-34806947 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 883-983
Cow position: chr29:5389891-5389991 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 888-1004
Cow position: chr29:11159332-11159448 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.