Cow genome map

Conread name: Ss1.1-rfbs3925b_b2.5

Conread position: 112-1001
Cow position: chr9:6551042-6550143 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 680

Conread position: 755-1001
Cow position: chr9:24918078-24918322 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 756-989
Cow position: chr9:13472356-13472585 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 764-1004
Cow position: chr9:23526959-23526723 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 25

Conread position: 765-989
Cow position: chr9:55031706-55031492 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 765-1000
Cow position: chr9:62669352-62669588 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 128, 12

Conread position: 765-1004
Cow position: chr9:4127739-4127977 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 765-1004
Cow position: chr9:13220737-13220506 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 13

Conread position: 766-989
Cow position: chr9:20941673-20941450 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 766-1001
Cow position: chr9:14045871-14045639 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 34

Conread position: 766-1002
Cow position: chr9:9491739-9491976 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 176

Conread position: 766-1003
Cow position: chr9:22319213-22319452 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 766-1004
Cow position: chr9:382688-382926 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-874
Cow position: chr9:40316334-40316229 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 768-877
Cow position: chr9:7830705-7830813 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 768-891
Cow position: chr9:24725797-24725676 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 768-895
Cow position: chr9:34460405-34460531 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 768-896
Cow position: chr9:1307154-1307281 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 768-900
Cow position: chr9:34690332-34690463 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 768-912
Cow position: chr9:1259631-1259487 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 9

Conread position: 768-918
Cow position: chr9:64562407-64562259 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 145, 9

Conread position: 768-919
Cow position: chr9:25547956-25548107 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 10

Conread position: 768-920
Cow position: chr9:25596850-25596699 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 768-923
Cow position: chr9:772050-772202 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 768-925
Cow position: chr9:873850-873698 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 768-927
Cow position: chr9:9261570-9261414 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 768-927
Cow position: chr9:33056980-33056823 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 768-930
Cow position: chr9:59167526-59167685 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 768-932
Cow position: chr9:35624512-35624349 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 768-934
Cow position: chr9:35565341-35565507 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 13

Conread position: 768-936
Cow position: chr9:50003921-50003754 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 768-943
Cow position: chr9:3932915-3933088 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 768-943
Cow position: chr9:49981699-49981528 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 768-948
Cow position: chr9:3052463-3052285 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 768-949
Cow position: chr9:2190448-2190274 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 768-949
Cow position: chr9:15802597-15802417 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 150
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 768-949
Cow position: chr9:60409600-60409420 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 768-950
Cow position: chr9:36829854-36830034 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 768-956
Cow position: chr9:5887185-5887380 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 9

Conread position: 768-958
Cow position: chr9:18710691-18710502 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-961
Cow position: chr9:9357367-9357166 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 149, 14

Conread position: 768-965
Cow position: chr9:4191479-4191283 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-965
Cow position: chr9:30281818-30282014 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 768-966
Cow position: chr9:43494246-43494049 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-968
Cow position: chr9:15052691-15052883 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 768-971
Cow position: chr9:8282072-8282272 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 768-971
Cow position: chr9:62818023-62818225 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-972
Cow position: chr9:22803453-22803657 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 768-975
Cow position: chr9:44920433-44920229 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 768-982
Cow position: chr9:4673253-4673047 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 768-983
Cow position: chr9:825725-825940 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 10

Conread position: 768-983
Cow position: chr9:50326894-50326681 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-986
Cow position: chr9:2834802-2835019 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-986
Cow position: chr9:13492953-13492734 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 9

Conread position: 768-986
Cow position: chr9:15987205-15986985 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 120

Conread position: 768-988
Cow position: chr9:17300931-17301147 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 9

Conread position: 768-989
Cow position: chr9:1991356-1991574 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-989
Cow position: chr9:19545708-19545489 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-989
Cow position: chr9:59495985-59496205 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-995
Cow position: chr9:29338105-29337875 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 17

Conread position: 768-999
Cow position: chr9:17588336-17588100 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 9

Conread position: 768-1000
Cow position: chr9:1519790-1519559 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 10

Conread position: 768-1000
Cow position: chr9:16178782-16178554 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1000
Cow position: chr9:18506626-18506857 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1000
Cow position: chr9:42570413-42570181 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1001
Cow position: chr9:1248799-1249031 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:1640453-1640221 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 768-1001
Cow position: chr9:1838153-1837921 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:3546025-3545793 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:3756631-3756865 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 768-1001
Cow position: chr9:5430664-5430433 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:5452442-5452674 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:5628017-5627785 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1001
Cow position: chr9:7005939-7005707 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:7058852-7059084 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1001
Cow position: chr9:9210341-9210109 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:9872137-9871905 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:10939922-10939690 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:12260167-12260398 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:12285510-12285741 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:13187402-13187170 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:17061160-17061391 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:17302780-17303007 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:18539855-18539629 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:18830936-18830706 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:26325944-26325712 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:27038305-27038074 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 768-1001
Cow position: chr9:28025017-28024785 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:28657859-28658083 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:30675273-30675041 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:31810775-31810543 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:32972565-32972333 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:34059435-34059667 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:37158412-37158644 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:37182060-37181828 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:37253602-37253370 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:39303355-39303587 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:40143153-40143378 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:41312843-41313075 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:42868674-42868903 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 768-1001
Cow position: chr9:43496332-43496100 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:45792046-45791814 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:46667600-46667832 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1001
Cow position: chr9:48795094-48795326 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:51178471-51178702 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:52402157-52401925 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1001
Cow position: chr9:52526349-52526117 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1002
Cow position: chr9:2548497-2548730 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1002
Cow position: chr9:31124274-31124041 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr9:44202881-44203115 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1002
Cow position: chr9:45876716-45876483 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1002
Cow position: chr9:59197055-59196822 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 768-1003
Cow position: chr9:5608568-5608800 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 17

Conread position: 768-1003
Cow position: chr9:6252761-6252532 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position: chr9:10678732-10678961 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1003
Cow position: chr9:17870694-17870458 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 768-1003
Cow position: chr9:18071680-18071448 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1003
Cow position: chr9:19156094-19156329 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 13

Conread position: 768-1004
Cow position: chr9:127677-127889 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:174575-174810 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:217918-218153 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:777615-777851 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 9

Conread position: 768-1004
Cow position: chr9:1062498-1062732 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:1071086-1071321 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 13

Conread position: 768-1004
Cow position: chr9:1099792-1099557 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:1998102-1998332 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:2214337-2214096 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 10

Conread position: 768-1004
Cow position: chr9:2484419-2484654 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:2495543-2495778 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:2527484-2527251 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:2857041-2856807 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:2873672-2873437 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 768-1004
Cow position: chr9:3222669-3222437 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 768-1004
Cow position: chr9:3806792-3806560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:4940301-4940536 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:5328159-5328388 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 768-1004
Cow position: chr9:6365574-6365340 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:6707720-6707955 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:7104033-7104268 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:9016272-9016037 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:9021407-9021642 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:10567166-10567403 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 15

Conread position: 768-1004
Cow position: chr9:13181116-13180885 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 768-1004
Cow position: chr9:13312761-13312528 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:14003236-14003000 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 768-1004
Cow position: chr9:17017952-17017717 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:21461660-21461439 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 768-1004
Cow position: chr9:22570302-22570068 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:27898204-27897969 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:28681398-28681163 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:28785542-28785307 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:29193372-29193605 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:30401480-30401246 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:31417318-31417552 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:33843521-33843287 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:34238561-34238796 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:37174207-37174442 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:38679314-38679081 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:43225503-43225738 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:43856340-43856574 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 768-1004
Cow position: chr9:44168790-44168552 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1004
Cow position: chr9:46627509-46627274 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:47045145-47044910 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:47171251-47171015 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 768-1004
Cow position: chr9:50840630-50840396 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:52001912-52002143 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 9

Conread position: 768-1004
Cow position: chr9:52408132-52408362 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 9

Conread position: 768-1004
Cow position: chr9:54413411-54413645 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:54459304-54459539 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1004
Cow position: chr9:54995833-54995600 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 226, 9

Conread position: 768-1004
Cow position: chr9:55796907-55797140 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 17

Conread position: 768-1004
Cow position: chr9:56176968-56176733 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:64012031-64012266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 768-1004
Cow position: chr9:64049467-64049238 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1006
Cow position: chr9:17633685-17633442 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 176, 40

Conread position: 768-1007
Cow position: chr9:2677027-2677263 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1015
Cow position: chr9:60589967-60589722 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 9

Conread position: 768-1018
Cow position: chr9:2208471-2208720 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 9

Conread position: 768-1018
Cow position: chr9:51010757-51010518 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 238, 9

Conread position: 768-1019
Cow position: chr9:6886791-6886546 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1019
Cow position: chr9:53776891-53776651 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 768-1020
Cow position: chr9:59507981-59508232 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 238, 17

Conread position: 768-1026
Cow position: chr9:5007171-5006913 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 9

Conread position: 769-945
Cow position: chr9:3411698-3411871 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 769-1004
Cow position: chr9:3061783-3061554 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 769-1018
Cow position: chr9:58615499-58615744 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 770-989
Cow position: chr9:38633976-38633758 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 7

Conread position: 770-1001
Cow position: chr9:791117-791351 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 139, 8

Conread position: 770-1001
Cow position: chr9:27781716-27781946 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 770-1002
Cow position: chr9:2173737-2173500 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 93, 32

Conread position: 770-1004
Cow position: chr9:62764114-62764343 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 772-1001
Cow position: chr9:49512728-49512950 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 226, 17

Conread position: 772-1004
Cow position: chr9:30139416-30139645 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 0

Conread position: 772-1004
Cow position: chr9:36844736-36844964 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 126, 30

Conread position: 774-1004
Cow position: chr9:7844605-7844823 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 777-1018
Cow position: chr9:35361-35596 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 161, 0

Conread position: 778-949
Cow position: chr9:34917808-34917637 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 778-1008
Cow position: chr9:22442679-22442443 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 167, 24

Conread position: 781-918
Cow position: chr9:2618611-2618748 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 781-968
Cow position: chr9:3997574-3997761 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 782-1003
Cow position: chr9:11505165-11504944 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 157

Conread position: 782-1004
Cow position: chr9:43668011-43667793 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 783-1001
Cow position: chr9:10857204-10856986 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 787-989
Cow position: chr9:8951854-8952055 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 15

Conread position: 788-989
Cow position: chr9:1740535-1740734 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 788-1001
Cow position: chr9:10326119-10325911 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 788-1004
Cow position: chr9:4305892-4306112 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 126

Conread position: 788-1004
Cow position: chr9:18109881-18109664 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 788-1004
Cow position: chr9:42216532-42216319 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 788-1018
Cow position: chr9:19079043-19078820 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 788-1018
Cow position: chr9:59431681-59431452 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 92

Conread position: 793-1002
Cow position: chr9:34900641-34900431 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 793-1004
Cow position: chr9:20988470-20988268 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 44

Conread position: 794-932
Cow position: chr9:58747647-58747783 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 794-938
Cow position: chr9:10672162-10672305 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 58

Conread position: 794-995
Cow position: chr9:26087830-26088033 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 14

Conread position: 794-1002
Cow position: chr9:37068017-37067811 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 794-1003
Cow position: chr9:31078129-31077924 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 170, 0

Conread position: 794-1004
Cow position: chr9:17007786-17007996 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 794-1016
Cow position: chr9:8405583-8405364 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 16

Conread position: 795-955
Cow position: chr9:388577-388417 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 795-988
Cow position: chr9:9326903-9327096 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 18

Conread position: 795-1001
Cow position: chr9:6764600-6764806 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 795-1004
Cow position: chr9:62443806-62444012 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 796-1001
Cow position: chr9:21412481-21412278 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 796-1004
Cow position: chr9:1938864-1939070 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 797-983
Cow position: chr9:23421756-23421570 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 797-1004
Cow position: chr9:24873780-24873984 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 797-1004
Cow position: chr9:51692450-51692657 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 798-1004
Cow position: chr9:7458555-7458762 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 799-1004
Cow position: chr9:42902267-42902477 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 800-949
Cow position: chr9:34567811-34567666 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 800-1001
Cow position: chr9:22655978-22655778 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 186, 0

Conread position: 800-1004
Cow position: chr9:46525039-46525242 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 800-1021
Cow position: chr9:9649355-9649136 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 198, 29

Conread position: 802-961
Cow position: chr9:30439561-30439404 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 802-1001
Cow position: chr9:34761918-34761719 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 802-1002
Cow position: chr9:15835520-15835719 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 102, 36

Conread position: 802-1003
Cow position: chr9:8098315-8098118 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 53

Conread position: 802-1004
Cow position: chr9:2864400-2864598 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 145, 0

Conread position: 802-1004
Cow position: chr9:3960018-3960213 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 0

Conread position: 802-1004
Cow position: chr9:4647478-4647675 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 802-1004
Cow position: chr9:9958019-9958223 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 0

Conread position: 802-1004
Cow position: chr9:34945849-34946051 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 802-1005
Cow position: chr9:40415898-40416100 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 67

Conread position: 802-1015
Cow position: chr9:56861998-56862205 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 102

Conread position: 802-1018
Cow position: chr9:46152524-46152741 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 52

Conread position: 802-1020
Cow position: chr9:5269889-5269668 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 213

Conread position: 803-999
Cow position: chr9:46162521-46162719 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 804-1020
Cow position: chr9:5517346-5517134 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 198, 129

Conread position: 809-923
Cow position: chr9:63563572-63563458 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 101
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 810-1001
Cow position: chr9:59479691-59479882 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 817-917
Cow position: chr9:64005675-64005775 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 817-1001
Cow position: chr9:47005892-47005708 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 817-1002
Cow position: chr9:9199246-9199063 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 817-1002
Cow position: chr9:10111140-10110959 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 16

Conread position: 817-1003
Cow position: chr9:12161745-12161572 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 819-1004
Cow position: chr9:26055194-26055009 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 820-917
Cow position: chr9:58686740-58686837 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 820-999
Cow position: chr9:3217187-3217370 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 820-1001
Cow position: chr9:29787530-29787711 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 118

Conread position: 820-1002
Cow position: chr9:50775852-50775671 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 820-1004
Cow position: chr9:1404956-1404774 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 65

Conread position: 820-1004
Cow position: chr9:4284371-4284187 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 132

Conread position: 820-1004
Cow position: chr9:26280989-26280803 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 6

Conread position: 820-1004
Cow position: chr9:30475404-30475221 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 171, 0

Conread position: 820-1025
Cow position: chr9:23297762-23297962 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 821-1002
Cow position: chr9:20409526-20409349 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 821-1003
Cow position: chr9:44518524-44518706 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 821-1004
Cow position: chr9:23044614-23044426 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 822-1009
Cow position: chr9:56561896-56561708 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 171, 0

Conread position: 826-1001
Cow position: chr9:19302916-19303091 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1003
Cow position: chr9:29765432-29765259 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 828-1003
Cow position: chr9:7618872-7618696 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 117

Conread position: 828-1003
Cow position: chr9:44580084-44580260 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 833-1003
Cow position: chr9:35023098-35022934 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 837-1002
Cow position: chr9:33845148-33844979 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 61

Conread position: 837-1003
Cow position: chr9:13848412-13848578 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 837-1004
Cow position: chr9:35682159-35681993 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 837-1004
Cow position: chr9:35708325-35708159 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 837-1018
Cow position: chr9:6979332-6979150 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 178, 0

Conread position: 839-1000
Cow position: chr9:7146217-7146377 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 839-1003
Cow position: chr9:61198227-61198392 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 16

Conread position: 839-1004
Cow position: chr9:48039509-48039677 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 840-1004
Cow position: chr9:36088661-36088498 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 58

Conread position: 841-1003
Cow position: chr9:47110388-47110228 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 841-1004
Cow position: chr9:56166297-56166459 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 842-1003
Cow position: chr9:49283964-49283803 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 842-1003
Cow position: chr9:49457452-49457292 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 847-1001
Cow position: chr9:39813436-39813281 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 852-1003
Cow position: chr9:3730159-3730012 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 855-1004
Cow position: chr9:2681664-2681516 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 856-1001
Cow position: chr9:24423432-24423287 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 859-1021
Cow position: chr9:53530824-53530664 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 871-1001
Cow position: chr9:6549615-6549485 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 872-1022
Cow position: chr9:44820849-44820698 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 130, 143

Conread position: 875-1004
Cow position: chr9:26575929-26575801 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 876-1001
Cow position: chr9:26277735-26277608 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 883-1004
Cow position: chr9:31114231-31114109 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 883-1020
Cow position: chr9:33477987-33477849 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 130

Conread position: 884-1019
Cow position: chr9:6329311-6329444 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 888-1002
Cow position: chr9:6304294-6304408 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1004
Cow position: chr9:5525240-5525355 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.