Cow genome map
| Conread name: | Ss1.1-rfbs3938b_k21.5 |
| Conread position: | 3-108 |
| Cow position: | chr11:1377168-1377273 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-108 |
| Cow position: | chr11:2569647-2569752 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-277 |
| Cow position: | chr11:1340441-1340608 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-277 |
| Cow position: | chr11:2587848-2588015 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-277 |
| Cow position: | chr11:1386650-1386816 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 260-405 |
| Cow position: | chr11:1342034-1342178 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 260-405 |
| Cow position: | chr11:2589432-2589576 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 276-405 |
| Cow position: | chr11:1387908-1388034 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 402-576 |
| Cow position: | chr11:1346299-1346476 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 76, 150 |
| Conread position: | 402-891 |
| Cow position: | chr11:1390799-1391295 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 402-891 |
| Cow position: | chr11:1907654-1907158 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 624-892 |
| Cow position: | chr11:1346480-1346749 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 115 |
Show alignments to all cow chromosomes.