Cow genome map

Conread name: Ss1.1-rfbs3939b_n22.5

Conread position: 4-301
Cow position:
Alignm length: 299
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 104

Conread position: 7-301
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 10-289
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 87

Conread position: 10-310
Cow position:
Alignm length: 303
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 19-301
Cow position:
Alignm length: 284
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 19-301
Cow position:
Alignm length: 283
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-301
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 21-299
Cow position:
Alignm length: 281
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 68

Conread position: 21-301
Cow position:
Alignm length: 282
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 21-301
Cow position:
Alignm length: 284
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 76

Conread position: 21-301
Cow position:
Alignm length: 282
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 22-300
Cow position:
Alignm length: 280
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 253, 125

Conread position: 25-250
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 73

Conread position: 25-250
Cow position:
Alignm length: 227
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 67

Conread position: 25-251
Cow position:
Alignm length: 227
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-258
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 69

Conread position: 25-291
Cow position:
Alignm length: 267
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-291
Cow position:
Alignm length: 268
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 156, 147

Conread position: 25-291
Cow position:
Alignm length: 267
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-298
Cow position:
Alignm length: 276
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 213, 208

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 250, 239

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 72, 61

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 175
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 224, 242

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 151

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 132, 145

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 62

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 276, 0

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 276, 0

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 64

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 276, 0

Conread position: 26-310
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 277, 0

Conread position: 27-251
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 27-251
Cow position:
Alignm length: 225
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 27-291
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 239, 243

Conread position: 27-299
Cow position:
Alignm length: 274
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 248, 237

Conread position: 27-301
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 63

Conread position: 27-301
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 248, 242

Conread position: 27-310
Cow position:
Alignm length: 288
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 19

Conread position: 27-310
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 276, 0

Conread position: 29-301
Cow position:
Alignm length: 273
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 29-301
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 29-310
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 272, 0

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 30-301
Cow position:
Alignm length: 274
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 55

Conread position: 30-301
Cow position:
Alignm length: 273
Alignm identity: 171
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 243, 222

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 30-309
Cow position:
Alignm length: 281
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 273, 0

Conread position: 31-290
Cow position:
Alignm length: 260
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 31-300
Cow position:
Alignm length: 270
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 31-301
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 139, 157

Conread position: 32-301
Cow position:
Alignm length: 270
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 32-301
Cow position:
Alignm length: 270
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 33-251
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 33-290
Cow position:
Alignm length: 259
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 63

Conread position: 33-291
Cow position:
Alignm length: 259
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 33-301
Cow position:
Alignm length: 271
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 182, 225

Conread position: 33-301
Cow position:
Alignm length: 269
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 33-301
Cow position:
Alignm length: 269
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 33-301
Cow position:
Alignm length: 270
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 238, 242

Conread position: 33-302
Cow position:
Alignm length: 271
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 241, 232

Conread position: 34-301
Cow position:
Alignm length: 268
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 36-301
Cow position:
Alignm length: 266
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-301
Cow position:
Alignm length: 268
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 62

Conread position: 36-301
Cow position:
Alignm length: 266
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 36-301
Cow position:
Alignm length: 268
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 62

Conread position: 36-330
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 227, 232

Conread position: 40-300
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 44-301
Cow position:
Alignm length: 258
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 44-301
Cow position:
Alignm length: 259
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 97

Conread position: 45-300
Cow position:
Alignm length: 256
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.