Cow genome map


           Conread name:
           Ss1.1-rfbs3939b_n22.5
        

               Conread position:
               20-308
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               281, 0
               

               Conread position:
               21-299
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               151, 166
               

               Conread position:
               21-309
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               221, 201
               

               Conread position:
               21-309
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               21-309
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               149, 157
               

               Conread position:
               22-223
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-249
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               217, 201
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-298
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               240, 231
               

               Conread position:
               25-300
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 84
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 243
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               145, 152
               

               Conread position:
               25-304
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-308
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               274, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               109, 115
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               25-310
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               27-289
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               236, 216
               

               Conread position:
               27-289
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-300
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-301
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-301
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               155, 163
               

               Conread position:
               27-301
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               154, 162
               

               Conread position:
               27-301
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-309
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               128, 149
               

               Conread position:
               30-240
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               30-309
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               231, 223
               

               Conread position:
               30-309
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               30-309
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               33-231
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               137, 142
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               264, 0
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               149, 156
               

               Conread position:
               36-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               131, 142
               

               Conread position:
               40-310
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               261, 0
               

               Conread position:
               45-309
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 58
               
Show alignments to all cow chromosomes.