Cow genome map

Conread name: Ss1.1-rfbs3939b_n22.5

Conread position: 9-249
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 9-301
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 10-309
Cow position:
Alignm length: 303
Alignm identity: 197
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 11

Conread position: 10-309
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 255

Conread position: 18-301
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 21-291
Cow position:
Alignm length: 272
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 21-301
Cow position:
Alignm length: 282
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 21-301
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 5, 88

Conread position: 21-301
Cow position:
Alignm length: 282
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 21-301
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 21-301
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 239

Conread position: 22-301
Cow position:
Alignm length: 280
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 25-299
Cow position:
Alignm length: 275
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 25-299
Cow position:
Alignm length: 275
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 25-300
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 260, 0

Conread position: 25-300
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 151, 145

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 0

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 153

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 155, 165

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 72

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 61

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 72

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 75

Conread position: 25-302
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 146, 150

Conread position: 25-307
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 274, 0

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 275, 0

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 62

Conread position: 25-310
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 75

Conread position: 27-258
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 27-291
Cow position:
Alignm length: 265
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 174, 0

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 27-301
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 59

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 27-301
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 129, 136

Conread position: 27-310
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 58

Conread position: 30-249
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 30-251
Cow position:
Alignm length: 222
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 30-298
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 30-300
Cow position:
Alignm length: 274
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 78

Conread position: 30-301
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 220, 211

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 257, 0

Conread position: 30-307
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 78

Conread position: 30-309
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 139, 146

Conread position: 30-310
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 273, 0

Conread position: 31-291
Cow position:
Alignm length: 261
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 32-301
Cow position:
Alignm length: 270
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 32-309
Cow position:
Alignm length: 281
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 142

Conread position: 33-310
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 268, 0

Conread position: 34-309
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 267, 0

Conread position: 35-250
Cow position:
Alignm length: 216
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 206, 0

Conread position: 35-251
Cow position:
Alignm length: 217
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-309
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 224, 218

Conread position: 35-309
Cow position:
Alignm length: 276
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 266, 0

Conread position: 35-309
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 228, 218

Conread position: 36-254
Cow position:
Alignm length: 220
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 58

Conread position: 36-301
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 142, 136

Conread position: 36-310
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 265, 0

Conread position: 38-301
Cow position:
Alignm length: 265
Alignm identity: 167
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 21

Conread position: 39-289
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 69

Conread position: 44-301
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 16

Conread position: 44-301
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 206, 197

Conread position: 44-301
Cow position:
Alignm length: 258
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.