Cow genome map

Conread name: Ss1.1-rfbs3939b_n22.5

Conread position: 6-301
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 86

Conread position: 10-309
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 166

Conread position: 12-301
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 30

Conread position: 21-300
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 196

Conread position: 21-302
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 21-310
Cow position:
Alignm length: 292
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 22-244
Cow position:
Alignm length: 223
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-301
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 25-250
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 25-264
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 184, 0

Conread position: 25-264
Cow position:
Alignm length: 240
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 197, 0

Conread position: 25-281
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 127, 60

Conread position: 25-283
Cow position:
Alignm length: 259
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-289
Cow position:
Alignm length: 265
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-291
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-297
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 25-299
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 145, 153

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 159, 145

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 217, 198

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 66

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-302
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 66

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 78

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 278, 0

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 278, 0

Conread position: 25-310
Cow position:
Alignm length: 287
Alignm identity: 180
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 277, 0

Conread position: 25-310
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 278, 0

Conread position: 25-310
Cow position:
Alignm length: 291
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 93

Conread position: 26-300
Cow position:
Alignm length: 275
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 26-301
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 251, 239

Conread position: 26-309
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 273, 0

Conread position: 27-245
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 27-251
Cow position:
Alignm length: 225
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 27-291
Cow position:
Alignm length: 265
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-300
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 72

Conread position: 27-301
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 46, 58

Conread position: 27-301
Cow position:
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 71

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 27-303
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 27-309
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 216, 230

Conread position: 27-309
Cow position:
Alignm length: 284
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 276, 0

Conread position: 27-309
Cow position:
Alignm length: 285
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 147

Conread position: 27-309
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 276, 0

Conread position: 27-310
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 276, 0

Conread position: 30-245
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 57

Conread position: 30-270
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 239

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 30-301
Cow position:
Alignm length: 272
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 30-309
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 273, 0

Conread position: 33-299
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 52

Conread position: 33-301
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 33-301
Cow position:
Alignm length: 270
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 55

Conread position: 33-309
Cow position:
Alignm length: 280
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 145

Conread position: 36-289
Cow position:
Alignm length: 254
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 36-300
Cow position:
Alignm length: 265
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 41-307
Cow position:
Alignm length: 268
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 262, 0

Conread position: 41-309
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 42-205
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 42-299
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 173, 166

Conread position: 42-310
Cow position:
Alignm length: 270
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 260, 0

Conread position: 43-251
Cow position:
Alignm length: 210
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 53

Conread position: 44-301
Cow position:
Alignm length: 259
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 23

Conread position: 45-301
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 44

Conread position: 45-301
Cow position:
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 124, 134

Conread position: 46-290
Cow position:
Alignm length: 246
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 131

Conread position: 47-309
Cow position:
Alignm length: 264
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 256, 0

Conread position: 66-309
Cow position:
Alignm length: 246
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 31

Conread position: 108-301
Cow position:
Alignm length: 194
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.