Cow genome map


           Conread name:
           Ss1.1-rfbs3939b_n22.5
        

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 176
               

               Conread position:
               10-301
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               20-309
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               22-300
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               25-208
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-231
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-292
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-300
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               132, 149
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-307
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               133, 141
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               273, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               278, 197
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               234, 59
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               233, 16
               

               Conread position:
               25-310
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               25-310
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               26-301
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-301
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               266, 0
               

               Conread position:
               28-309
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               271, 20
               

               Conread position:
               30-230
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-245
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-309
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               266, 0
               

               Conread position:
               36-258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-270
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               36-301
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               36-301
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               41-245
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-310
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               207, 225
               

               Conread position:
               45-300
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               47-309
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               254, 0
               

               Conread position:
               105-309
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 64
               
Show alignments to all cow chromosomes.