Cow genome map

Conread name: Ss1.1-rfbs3939b_n22.5

Conread position: 3-310
Cow position:
Alignm length: 310
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 254, 20

Conread position: 9-301
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 92

Conread position: 15-309
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 227, 12

Conread position: 17-301
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 18

Conread position: 18-301
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 13

Conread position: 18-309
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 19-301
Cow position:
Alignm length: 285
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 71

Conread position: 19-310
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 49

Conread position: 21-301
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 82

Conread position: 22-255
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 77

Conread position: 22-301
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 87

Conread position: 22-309
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 280, 19

Conread position: 25-246
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 83

Conread position: 25-250
Cow position:
Alignm length: 228
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 198, 0

Conread position: 25-251
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 65

Conread position: 25-251
Cow position:
Alignm length: 227
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 25-256
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-264
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 165

Conread position: 25-289
Cow position:
Alignm length: 268
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 61

Conread position: 25-289
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-298
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-298
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 225, 216

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 61

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 225, 234

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 228, 233

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 250, 232

Conread position: 25-301
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 147, 153

Conread position: 25-301
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 154

Conread position: 25-301
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-302
Cow position:
Alignm length: 278
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 274, 0

Conread position: 25-309
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 152, 58

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 150, 144

Conread position: 25-309
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 237, 228

Conread position: 25-309
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 25-310
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 275, 0

Conread position: 25-310
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 26-307
Cow position:
Alignm length: 284
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 65

Conread position: 27-301
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 225, 231

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 28-309
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 203, 208

Conread position: 30-230
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 30-254
Cow position:
Alignm length: 227
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 79

Conread position: 30-289
Cow position:
Alignm length: 260
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 30-291
Cow position:
Alignm length: 264
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 70

Conread position: 30-301
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 67, 79

Conread position: 30-309
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 80

Conread position: 30-309
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 269, 0

Conread position: 30-310
Cow position:
Alignm length: 282
Alignm identity: 182
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 273, 0

Conread position: 31-258
Cow position:
Alignm length: 228
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 31-309
Cow position:
Alignm length: 282
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 238, 225

Conread position: 33-301
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 215, 224

Conread position: 33-301
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 35-309
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 49

Conread position: 36-301
Cow position:
Alignm length: 266
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 41-250
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 61

Conread position: 45-301
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.