Cow genome map


           Conread name:
           Ss1.1-rfbs3939b_n22.5
        

               Conread position:
               8-300
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-310
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 265
               

               Conread position:
               25-224
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 84
               

               Conread position:
               25-226
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-250
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               132, 163
               

               Conread position:
               25-282
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-282
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               162, 145
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 151
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               25-298
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               233, 216
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               277, 0
               

               Conread position:
               25-348
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               276, 310
               

               Conread position:
               27-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               30-301
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 145
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               139, 145
               

               Conread position:
               33-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               228, 223
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-301
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               45-291
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               47-301
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               206, 212
               

               Conread position:
               66-289
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 43
               
Show alignments to all cow chromosomes.