Cow genome map


           Conread name:
           Ss1.1-rfbs3939b_n22.5
        

               Conread position:
               22-212
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 165
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               149, 156
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-301
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-309
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               25-219
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               159, 147
               

               Conread position:
               25-224
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-246
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-289
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               148, 155
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               146, 153
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               225, 216
               

               Conread position:
               25-301
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               140, 153
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               219, 239
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               25-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               274, 0
               

               Conread position:
               25-310
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               277, 0
               

               Conread position:
               26-308
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               27-312
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               30-301
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-309
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               269, 0
               

               Conread position:
               31-296
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               33-291
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               35-219
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-309
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               35-309
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 50
               
Show alignments to all cow chromosomes.