Cow genome map
| Conread name: | Ss1.1-rfcc08b_f3.5 |
| Conread position: | 10-373 |
| Cow position: | chr14:25794509-25794147 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 10-424 |
| Cow position: | chr14:3127685-3127271 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 11-469 |
| Cow position: | chr14:25876909-25877366 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 117, 136 |
| Conread position: | 14-472 |
| Cow position: | chr14:25795261-25794803 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 29-450 |
| Cow position: | chr14:25859204-25859625 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 250, 239 |
| Conread position: | 41-458 |
| Cow position: | chr14:447620-448038 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 42-472 |
| Cow position: | chr14:25835911-25836342 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 47-463 |
| Cow position: | chr14:25794976-25794560 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-474 |
| Cow position: | chr14:25860150-25860573 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 359, 345 |
| Conread position: | 51-474 |
| Cow position: | chr14:25877201-25877624 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 223, 236 |
| Conread position: | 56-446 |
| Cow position: | chr14:25910878-25911268 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 61-447 |
| Cow position: | chr14:3080794-3080408 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 62-420 |
| Cow position: | chr14:25784321-25784679 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-452 |
| Cow position: | chr14:25784153-25784544 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 62-470 |
| Cow position: | chr14:25783565-25783973 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 62-472 |
| Cow position: | chr14:25783733-25784143 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-473 |
| Cow position: | chr14:25783985-25784396 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-456 |
| Cow position: | chr14:25876374-25876766 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 64-459 |
| Cow position: | chr14:25783315-25783712 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 64-470 |
| Cow position: | chr14:25860079-25860485 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 236, 229 |
| Conread position: | 64-470 |
| Cow position: | chr14:25877130-25877536 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 236, 229 |
| Conread position: | 64-472 |
| Cow position: | chr14:25860331-25860739 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-404 |
| Cow position: | chr14:680951-681290 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-442 |
| Cow position: | chr14:3156038-3156415 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 65-470 |
| Cow position: | chr14:3128134-3127729 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 65-473 |
| Cow position: | chr14:25794622-25794213 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 66-473 |
| Cow position: | chr14:25876292-25876699 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 208, 217 |
| Conread position: | 67-478 |
| Cow position: | chr14:3155302-3155710 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 70-456 |
| Cow position: | chr14:25859749-25860135 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-350 |
| Cow position: | chr14:25860506-25860785 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 71-387 |
| Cow position: | chr14:25877557-25877873 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 71-456 |
| Cow position: | chr14:25876801-25877186 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-462 |
| Cow position: | chr14:25895260-25895651 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 326, 339 |
| Conread position: | 71-463 |
| Cow position: | chr14:3080367-3079972 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 71-468 |
| Cow position: | chr14:25859330-25859727 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 215, 204 |
| Conread position: | 71-476 |
| Cow position: | chr14:25859414-25859819 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 203, 212 |
| Conread position: | 73-386 |
| Cow position: | chr14:25784416-25784729 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 151, 160 |
| Conread position: | 73-471 |
| Cow position: | chr14:25794866-25794468 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 258 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 73-471 |
| Cow position: | chr14:25859584-25859982 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 73-472 |
| Cow position: | chr14:25784080-25784479 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 215 |
| Conread position: | 73-473 |
| Cow position: | chr14:25860258-25860656 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 8 |
| Conread position: | 74-356 |
| Cow position: | chr14:3079941-3079658 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 74-366 |
| Cow position: | chr14:25896103-25896395 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 213, 209 |
| Conread position: | 74-384 |
| Cow position: | chr14:25910980-25911290 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-432 |
| Cow position: | chr14:25860425-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 74-441 |
| Cow position: | chr14:3080109-3079742 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 74-444 |
| Cow position: | chr14:25877476-25877846 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 74-468 |
| Cow position: | chr14:25910814-25911206 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 74-472 |
| Cow position: | chr14:25835860-25836258 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 74-472 |
| Cow position: | chr14:25836784-25837182 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-472 |
| Cow position: | chr14:25877392-25877790 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 336 |
| Conread position: | 74-473 |
| Cow position: | chr14:25836112-25836511 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 74-473 |
| Cow position: | chr14:25860005-25860404 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 242, 233 |
| Conread position: | 74-473 |
| Cow position: | chr14:25876468-25876867 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 74-473 |
| Cow position: | chr14:25877056-25877455 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 242, 233 |
| Conread position: | 74-474 |
| Cow position: | chr14:25836196-25836596 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 74-474 |
| Cow position: | chr14:25836616-25837016 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 259, 264 |
| Conread position: | 74-474 |
| Cow position: | chr14:25859921-25860321 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 386 |
| Conread position: | 74-474 |
| Cow position: | chr14:25876720-25877120 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 74-474 |
| Cow position: | chr14:25895095-25895495 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 149, 168 |
| Conread position: | 74-474 |
| Cow position: | chr14:25895515-25895915 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 74-474 |
| Cow position: | chr14:25895851-25896251 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 74-474 |
| Cow position: | chr14:25895935-25896335 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-479 |
| Cow position: | chr14:3080697-3080293 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 0 |
| Conread position: | 80-462 |
| Cow position: | chr14:3127698-3127317 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 7 |
| Conread position: | 80-474 |
| Cow position: | chr14:3101180-3100792 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 118, 7 |
| Conread position: | 81-428 |
| Cow position: | chr14:3100681-3100336 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 333, 0 |
| Conread position: | 81-472 |
| Cow position: | chr14:25910739-25911126 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 81-473 |
| Cow position: | chr14:25876559-25876951 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 238 |
| Conread position: | 81-479 |
| Cow position: | chr14:25795277-25794881 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 242, 6 |
| Conread position: | 82-456 |
| Cow position: | chr14:25836036-25836410 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-435 |
| Cow position: | chr14:3155484-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-477 |
| Cow position: | chr14:447916-448309 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 240, 229 |
| Conread position: | 87-474 |
| Cow position: | chr14:447583-447970 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 140, 145 |
| Conread position: | 90-450 |
| Cow position: | chr14:3101422-3101063 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 86, 96 |
| Conread position: | 94-426 |
| Cow position: | chr14:3156151-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 94-441 |
| Cow position: | chr14:25794509-25794160 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 180, 221 |
| Conread position: | 94-447 |
| Cow position: | chr14:3100836-3100483 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 185, 174 |
| Conread position: | 94-447 |
| Cow position: | chr14:3128190-3127836 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 94-448 |
| Cow position: | chr14:680895-681250 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 94-468 |
| Cow position: | chr14:25895031-25895405 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 133, 138 |
| Conread position: | 94-474 |
| Cow position: | chr14:3080257-3079877 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 94-474 |
| Cow position: | chr14:3127937-3127557 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 94-474 |
| Cow position: | chr14:25895451-25895831 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 192, 188 |
| Conread position: | 94-478 |
| Cow position: | chr14:3127853-3127470 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 95-432 |
| Cow position: | chr14:25836889-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 95-447 |
| Cow position: | chr14:3155900-3156252 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 95-447 |
| Cow position: | chr14:3155984-3156336 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-448 |
| Cow position: | chr14:25794760-25794407 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-449 |
| Cow position: | chr14:25836301-25836655 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 95-456 |
| Cow position: | chr14:25836721-25837082 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 95-456 |
| Cow position: | chr14:25859522-25859881 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 345, 0 |
| Conread position: | 95-462 |
| Cow position: | chr14:3127768-3127401 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-462 |
| Cow position: | chr14:3155411-3155778 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-469 |
| Cow position: | chr14:25895704-25896078 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 137, 128 |
| Conread position: | 95-470 |
| Cow position: | chr14:25784270-25784645 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 95-472 |
| Cow position: | chr14:25783514-25783891 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-472 |
| Cow position: | chr14:25835797-25836174 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 190, 173 |
| Conread position: | 95-472 |
| Cow position: | chr14:25836469-25836846 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 95-473 |
| Cow position: | chr14:25836553-25836931 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 95-473 |
| Cow position: | chr14:25877329-25877707 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 95-474 |
| Cow position: | chr14:25836385-25836764 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 95-474 |
| Cow position: | chr14:25894948-25895327 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 148 |
| Conread position: | 95-474 |
| Cow position: | chr14:25895200-25895579 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 96-281 |
| Cow position: | chr14:3156563-3156749 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 96-321 |
| Cow position: | chr14:25794338-25794113 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 209, 218 |
| Conread position: | 96-459 |
| Cow position: | chr14:25783431-25783796 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 96-474 |
| Cow position: | chr14:25876238-25876616 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-451 |
| Cow position: | chr14:25783937-25784290 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-456 |
| Cow position: | chr14:25795093-25794735 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 98-470 |
| Cow position: | chr14:25795009-25794637 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 98-472 |
| Cow position: | chr14:25783853-25784227 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-473 |
| Cow position: | chr14:25783685-25784060 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 102-456 |
| Cow position: | chr14:25859193-25859547 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 102-473 |
| Cow position: | chr14:3100744-3100373 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 225, 211 |
| Conread position: | 104-477 |
| Cow position: | chr14:25795339-25794966 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 105-458 |
| Cow position: | chr14:25894877-25895227 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 105-462 |
| Cow position: | chr14:3080834-3080477 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 110-426 |
| Cow position: | chr14:3079989-3079673 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-463 |
| Cow position: | chr14:3128005-3127652 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-441 |
| Cow position: | chr14:3061550-3061225 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-447 |
| Cow position: | chr14:3080151-3079820 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-454 |
| Cow position: | chr14:420584-420919 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 194, 51 |
| Conread position: | 116-461 |
| Cow position: | chr14:447864-448209 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-411 |
| Cow position: | chr14:680361-680625 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-471 |
| Cow position: | chr14:25795463-25795140 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 168, 145 |
| Conread position: | 154-474 |
| Cow position: | chr14:3101442-3101123 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 155-344 |
| Cow position: | chr14:3100523-3100336 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 155-447 |
| Cow position: | chr14:433956-434248 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-448 |
| Cow position: | chr14:3080868-3080575 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 155-474 |
| Cow position: | chr14:680789-681108 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 156-462 |
| Cow position: | chr14:433873-434179 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 156-463 |
| Cow position: | chr14:680706-681013 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 156-479 |
| Cow position: | chr14:447568-447890 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 157-475 |
| Cow position: | chr14:25910732-25911045 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 158-473 |
| Cow position: | chr14:25783325-25783640 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 160-474 |
| Cow position: | chr14:3155881-3156195 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 158, 132 |
| Conread position: | 162-447 |
| Cow position: | chr14:3100852-3100567 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 156, 131 |
| Conread position: | 168-456 |
| Cow position: | chr14:680634-680922 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-471 |
| Cow position: | chr14:25895441-25895744 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 120 |
| Conread position: | 176-462 |
| Cow position: | chr14:3061742-3061456 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-474 |
| Cow position: | chr14:447512-447802 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 229-472 |
| Cow position: | chr14:25783312-25783555 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.