Cow genome map
| Conread name: | Ss1.1-rfcc08b_f3.5 |
| Conread position: | 10-474 |
| Cow position: | chr24:17035791-17035327 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 10-474 |
| Cow position: | chr24:17036463-17035999 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 10-475 |
| Cow position: | chr24:17035287-17034831 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 11-465 |
| Cow position: | chr24:17035538-17035085 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 11-472 |
| Cow position: | chr24:17036294-17035833 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 11-473 |
| Cow position: | chr24:17035622-17035160 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 11-473 |
| Cow position: | chr24:17036042-17035580 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 11-473 |
| Cow position: | chr24:17036210-17035748 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-474 |
| Cow position: | chr24:17036378-17035915 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 11-475 |
| Cow position: | chr24:17035958-17035494 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 41-426 |
| Cow position: | chr24:17077896-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 41-464 |
| Cow position: | chr24:17078064-17077640 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 366 |
| Conread position: | 41-474 |
| Cow position: | chr24:17035425-17034991 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 41-475 |
| Cow position: | chr24:17070488-17070923 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 42-236 |
| Cow position: | chr24:16986460-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 42-462 |
| Cow position: | chr24:17077979-17077558 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 42-475 |
| Cow position: | chr24:17036096-17035662 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 53-448 |
| Cow position: | chr24:17013125-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 58-474 |
| Cow position: | chr24:17035828-17035411 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 64-463 |
| Cow position: | chr24:17078124-17077725 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 65-474 |
| Cow position: | chr24:17036492-17036083 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 73-475 |
| Cow position: | chr24:17078283-17077881 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-431 |
| Cow position: | chr24:17070690-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 94-474 |
| Cow position: | chr24:17036547-17036167 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-447 |
| Cow position: | chr24:17070627-17070979 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-475 |
| Cow position: | chr24:17013105-17013460 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 119-474 |
| Cow position: | chr24:17078153-17077798 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 288 |
| Conread position: | 158-449 |
| Cow position: | chr24:17070438-17070729 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-404 |
| Cow position: | chr24:16986412-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 151, 120 |
Show alignments to all cow chromosomes.