Cow genome map
Conread name: | Ss1.1-rfcc08b_f3.5 |
Conread position: | 2-416 |
Cow position: | chr8:46816958-46817374 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 260 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 10-402 |
Cow position: | chr8:45201605-45201997 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 245 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 71, 78 |
Conread position: | 10-435 |
Cow position: | chr8:48406707-48406280 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 270 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 55, 31 |
Conread position: | 10-448 |
Cow position: | chr8:46815959-46816398 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 281 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 18, 95 |
Conread position: | 10-463 |
Cow position: | chr8:45201521-45201975 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 41 |
Conread position: | 11-448 |
Cow position: | chr8:46816633-46817070 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 282 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 54, 30 |
Conread position: | 11-474 |
Cow position: | chr8:45201186-45201649 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 30 |
Conread position: | 11-474 |
Cow position: | chr8:46816129-46816592 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 30 |
Conread position: | 11-480 |
Cow position: | chr8:48406790-48406321 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-476 |
Cow position: | chr8:48406957-48406493 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 76 |
Conread position: | 15-463 |
Cow position: | chr8:46816552-46817001 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 299 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 5, 27 |
Conread position: | 29-449 |
Cow position: | chr8:48407528-48407108 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 59 |
Conread position: | 37-442 |
Cow position: | chr8:48407184-48406779 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 51 |
Conread position: | 41-463 |
Cow position: | chr8:55581019-55581442 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 42-444 |
Cow position: | chr8:46816915-46817318 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 264 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 42-472 |
Cow position: | chr8:45201300-45201731 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 47 |
Conread position: | 62-476 |
Cow position: | chr8:48407327-48406913 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 26 |
Conread position: | 63-459 |
Cow position: | chr8:48406822-48406424 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 250 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 389, 0 |
Conread position: | 64-423 |
Cow position: | chr8:48406569-48406201 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 237 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 218, 222 |
Conread position: | 64-447 |
Cow position: | chr8:46816350-46816733 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 64-448 |
Cow position: | chr8:46816854-46817238 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 254 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 74, 102 |
Conread position: | 64-449 |
Cow position: | chr8:46816434-46816819 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 244 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 72, 81 |
Conread position: | 64-474 |
Cow position: | chr8:55581127-55581537 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 24 |
Conread position: | 65-447 |
Cow position: | chr8:46816771-46817153 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 251 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 87, 94 |
Conread position: | 65-473 |
Cow position: | chr8:48407408-48407000 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 253 |
Conread position: | 70-447 |
Cow position: | chr8:46816104-46816481 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 255 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 66, 75 |
Conread position: | 71-478 |
Cow position: | chr8:46816525-46816932 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 17 |
Conread position: | 73-462 |
Cow position: | chr8:55581304-55581693 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 250 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 73-471 |
Cow position: | chr8:55581220-55581618 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 254 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 73-472 |
Cow position: | chr8:48407232-48406833 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 74-442 |
Cow position: | chr8:46816276-46816644 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 240 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 7, 14 |
Conread position: | 80-474 |
Cow position: | chr8:55580892-55581285 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 93-459 |
Cow position: | chr8:45201016-45201384 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 0 |
Conread position: | 94-474 |
Cow position: | chr8:45201437-45201817 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-475 |
Cow position: | chr8:45201521-45201902 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-436 |
Cow position: | chr8:55581410-55581751 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 213 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-472 |
Cow position: | chr8:48407546-48407169 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-472 |
Cow position: | chr8:48407630-48407253 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-473 |
Cow position: | chr8:48406958-48406580 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 245 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 45, 53 |
Conread position: | 95-474 |
Cow position: | chr8:45201102-45201481 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 106-479 |
Cow position: | chr8:55580833-55581205 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 44 |
Conread position: | 107-474 |
Cow position: | chr8:55581002-55581369 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 110-474 |
Cow position: | chr8:45200949-45201313 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 235 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 178, 172 |
Conread position: | 193-474 |
Cow position: | chr8:48407616-48407335 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 193 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 32, 16 |
Conread position: | 197-463 |
Cow position: | chr8:6958062-6957796 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 171 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-470 |
Cow position: | chr8:6958063-6957873 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 127 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.