Cow genome map
| Conread name: | Ss1.1-rfcc11b_a8.5 |
| Conread position: | 25-306 |
| Cow position: | chr10:31540906-31540637 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 25-331 |
| Cow position: | chr10:4584636-4584931 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 25-334 |
| Cow position: | chr10:16552726-16553036 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 25-343 |
| Cow position: | chr10:53319717-53320019 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 25-344 |
| Cow position: | chr10:28948010-28947698 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 25-344 |
| Cow position: | chr10:30688543-30688221 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 25-344 |
| Cow position: | chr10:33424995-33425316 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 25-344 |
| Cow position: | chr10:41159960-41159653 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 25-348 |
| Cow position: | chr10:41386432-41386755 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 45 |
| Conread position: | 26-302 |
| Cow position: | chr10:53980384-53980658 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 26-331 |
| Cow position: | chr10:16797252-16796946 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 27-328 |
| Cow position: | chr10:24309653-24309946 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 27-334 |
| Cow position: | chr10:39813855-39814152 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 27-344 |
| Cow position: | chr10:12546524-12546218 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 28-374 |
| Cow position: | chr10:58095499-58095857 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 29-328 |
| Cow position: | chr10:14855160-14854875 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 42-313 |
| Cow position: | chr10:9734435-9734699 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 44-325 |
| Cow position: | chr10:49185967-49186241 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 68-302 |
| Cow position: | chr10:24128583-24128826 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 71-344 |
| Cow position: | chr10:32703270-32702996 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 68 |
| Conread position: | 77-316 |
| Cow position: | chr10:42744098-42743866 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 80-334 |
| Cow position: | chr10:41654792-41654546 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 244, 13 |
| Conread position: | 82-334 |
| Cow position: | chr10:4500452-4500206 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 82-344 |
| Cow position: | chr10:31022401-31022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 242, 82 |
| Conread position: | 83-241 |
| Cow position: | chr10:51557891-51557733 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-258 |
| Cow position: | chr10:68097121-68097296 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-265 |
| Cow position: | chr10:8324637-8324819 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 83-279 |
| Cow position: | chr10:51085998-51085802 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-302 |
| Cow position: | chr10:45506943-45507155 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 83-310 |
| Cow position: | chr10:63625554-63625330 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-312 |
| Cow position: | chr10:31855974-31855745 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-314 |
| Cow position: | chr10:35024158-35023927 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-315 |
| Cow position: | chr10:32559671-32559438 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 83-325 |
| Cow position: | chr10:278858-279107 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-325 |
| Cow position: | chr10:19542932-19543173 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 83-327 |
| Cow position: | chr10:6536222-6535977 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 83-327 |
| Cow position: | chr10:50314127-50313882 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-328 |
| Cow position: | chr10:20368657-20368886 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 83-329 |
| Cow position: | chr10:55026071-55025833 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 83-330 |
| Cow position: | chr10:20373917-20374170 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 83-330 |
| Cow position: | chr10:35824849-35825090 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-331 |
| Cow position: | chr10:1379993-1379746 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-331 |
| Cow position: | chr10:15831577-15831822 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 83-331 |
| Cow position: | chr10:25340648-25340401 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-331 |
| Cow position: | chr10:41635876-41635636 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 83-334 |
| Cow position: | chr10:6003081-6003325 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 83-334 |
| Cow position: | chr10:11109175-11109427 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:15620888-15621141 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 83-334 |
| Cow position: | chr10:19842164-19841929 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:22574339-22574585 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 83-334 |
| Cow position: | chr10:24975340-24975589 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-334 |
| Cow position: | chr10:29107287-29107532 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:38842658-38842406 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:39210255-39210003 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:39440651-39440404 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:40399581-40399334 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 241, 39 |
| Conread position: | 83-334 |
| Cow position: | chr10:41140520-41140768 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:46193615-46193379 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:46762699-46762451 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:54929481-54929723 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr10:57479179-57479410 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 83-341 |
| Cow position: | chr10:57987208-57987463 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-343 |
| Cow position: | chr10:22645543-22645290 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 202, 32 |
| Conread position: | 83-343 |
| Cow position: | chr10:29629778-29630025 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-343 |
| Cow position: | chr10:30682997-30683248 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:2118532-2118793 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:4996836-4997094 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 83-344 |
| Cow position: | chr10:5868069-5868321 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:8292620-8292364 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:13851638-13851377 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:15489036-15488778 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:16928650-16928406 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 240, 54 |
| Conread position: | 83-344 |
| Cow position: | chr10:17958576-17958315 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:19493460-19493721 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:21426808-21427068 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:21489437-21489181 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 240, 38 |
| Conread position: | 83-344 |
| Cow position: | chr10:22343963-22343703 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:22618917-22619173 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 54 |
| Conread position: | 83-344 |
| Cow position: | chr10:23848457-23848196 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:25650926-25651179 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:30719184-30718926 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:32280341-32280080 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:32364434-32364174 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 83-344 |
| Cow position: | chr10:37127293-37127552 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:37772384-37772126 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:38342872-38343137 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 83-344 |
| Cow position: | chr10:39038566-39038822 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:40348162-40348421 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:41569596-41569342 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 241, 38 |
| Conread position: | 83-344 |
| Cow position: | chr10:52827120-52827378 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:53172826-53173087 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:55095762-55095504 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:57554844-57555105 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr10:58600015-58599760 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 83-344 |
| Cow position: | chr10:62406279-62406535 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 83-345 |
| Cow position: | chr10:36467365-36467627 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 83-345 |
| Cow position: | chr10:51950605-51950863 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-345 |
| Cow position: | chr10:54128047-54127787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 81 |
| Conread position: | 83-354 |
| Cow position: | chr10:32086181-32085908 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 83-382 |
| Cow position: | chr10:24294787-24295078 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 83-384 |
| Cow position: | chr10:37108878-37108584 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 83-442 |
| Cow position: | chr10:59465749-59466101 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 83-452 |
| Cow position: | chr10:47909114-47908748 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 84-315 |
| Cow position: | chr10:21897159-21897384 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 84-320 |
| Cow position: | chr10:24123565-24123800 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 84-330 |
| Cow position: | chr10:7895991-7896235 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 84-330 |
| Cow position: | chr10:21516519-21516764 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 84-331 |
| Cow position: | chr10:17137357-17137111 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 84-334 |
| Cow position: | chr10:1663471-1663718 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 84-334 |
| Cow position: | chr10:18022538-18022298 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 176, 38 |
| Conread position: | 84-334 |
| Cow position: | chr10:23908018-23907768 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 84-334 |
| Cow position: | chr10:39876946-39877197 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 85-334 |
| Cow position: | chr10:55401247-55400996 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 85-344 |
| Cow position: | chr10:20381459-20381717 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 89-271 |
| Cow position: | chr10:48652754-48652570 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 89-292 |
| Cow position: | chr10:42115744-42115541 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 89-331 |
| Cow position: | chr10:12101897-12102139 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-334 |
| Cow position: | chr10:25564067-25564310 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-334 |
| Cow position: | chr10:33868698-33868936 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-334 |
| Cow position: | chr10:48745326-48745571 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 89-344 |
| Cow position: | chr10:14333356-14333608 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-344 |
| Cow position: | chr10:44293227-44293479 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 89-344 |
| Cow position: | chr10:48374958-48375213 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 89-345 |
| Cow position: | chr10:41879425-41879170 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 90-294 |
| Cow position: | chr10:42335135-42335337 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 90-334 |
| Cow position: | chr10:39937304-39937535 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 91-334 |
| Cow position: | chr10:41773131-41773376 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 92-345 |
| Cow position: | chr10:40419601-40419347 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 93-329 |
| Cow position: | chr10:40149678-40149908 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 93-330 |
| Cow position: | chr10:40642425-40642186 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 93-334 |
| Cow position: | chr10:48396631-48396870 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 93-334 |
| Cow position: | chr10:60362313-60362078 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 232, 22 |
| Conread position: | 93-344 |
| Cow position: | chr10:22347430-22347190 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 230, 31 |
| Conread position: | 94-334 |
| Cow position: | chr10:20268211-20268452 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 95-344 |
| Cow position: | chr10:12668909-12668670 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 230, 78 |
| Conread position: | 100-344 |
| Cow position: | chr10:36445160-36445398 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 101-298 |
| Cow position: | chr10:10584608-10584412 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 101-334 |
| Cow position: | chr10:32318935-32318702 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 101-344 |
| Cow position: | chr10:42390615-42390841 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 101-344 |
| Cow position: | chr10:51780971-51781202 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 105-306 |
| Cow position: | chr10:28528925-28529126 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 107-334 |
| Cow position: | chr10:22635554-22635776 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 111-331 |
| Cow position: | chr10:42633379-42633160 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 116-345 |
| Cow position: | chr10:22689075-22688846 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 120-334 |
| Cow position: | chr10:14806321-14806113 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 204, 17 |
| Conread position: | 124-334 |
| Cow position: | chr10:11941334-11941543 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 124-344 |
| Cow position: | chr10:39849789-39850007 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 197, 40 |
| Conread position: | 127-285 |
| Cow position: | chr10:31738561-31738404 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 137-331 |
| Cow position: | chr10:53318348-53318540 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 144-330 |
| Cow position: | chr10:41149290-41149475 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 20 |
| Conread position: | 163-344 |
| Cow position: | chr10:31526146-31525970 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 163-344 |
| Cow position: | chr10:44670246-44670428 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 164-334 |
| Cow position: | chr10:34665322-34665493 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 164-335 |
| Cow position: | chr10:31045129-31045299 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 160, 9 |
| Conread position: | 169-325 |
| Cow position: | chr10:17435789-17435633 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 187-334 |
| Cow position: | chr10:57297258-57297405 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 121 |
Show alignments to all cow chromosomes.