Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 25-302
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 96, 50

Conread position: 25-330
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 96, 16

Conread position: 25-334
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 50

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 64

Conread position: 25-334
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 82

Conread position: 25-334
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 33

Conread position: 25-334
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 54

Conread position: 25-344
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 54

Conread position: 25-344
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 55

Conread position: 26-250
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 95, 48

Conread position: 26-344
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 68

Conread position: 27-240
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 14

Conread position: 60-345
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 23

Conread position: 71-334
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 6, 68

Conread position: 76-344
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 62

Conread position: 83-250
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 55

Conread position: 83-261
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 58

Conread position: 83-263
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 55

Conread position: 83-278
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 82

Conread position: 83-288
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 55

Conread position: 83-299
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-306
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-307
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-321
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 55

Conread position: 83-325
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 85

Conread position: 83-329
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 78

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 79

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 43

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 50

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 69

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 58

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 82

Conread position: 83-334
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 229, 18

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 58

Conread position: 83-343
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 40

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 82

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 54

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 48

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 26, 56

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 51

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 64, 54

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 84-325
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 54

Conread position: 84-334
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 39

Conread position: 84-334
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 54

Conread position: 84-340
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 223, 53

Conread position: 84-343
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 53

Conread position: 84-345
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 5

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 80

Conread position: 85-344
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 53

Conread position: 86-248
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 52

Conread position: 86-344
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 52

Conread position: 89-315
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 49

Conread position: 89-319
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 77

Conread position: 89-331
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 53

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 76

Conread position: 89-334
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 49

Conread position: 89-334
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 49

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 48

Conread position: 89-340
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 44

Conread position: 89-344
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 52

Conread position: 89-347
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 49

Conread position: 89-370
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 50

Conread position: 90-331
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 233, 32

Conread position: 91-345
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 30, 74

Conread position: 92-345
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 29, 46

Conread position: 93-308
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 45

Conread position: 93-324
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 72

Conread position: 93-344
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 25

Conread position: 94-298
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 71

Conread position: 94-315
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 27, 74

Conread position: 94-318
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 11

Conread position: 94-334
Cow position:
Alignm length: 241
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 95-345
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 27

Conread position: 97-334
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 24, 41

Conread position: 101-306
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 37

Conread position: 101-334
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 51

Conread position: 101-334
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 76

Conread position: 101-345
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 37

Conread position: 101-345
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 65

Conread position: 105-288
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 48

Conread position: 105-334
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 33

Conread position: 108-287
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 30

Conread position: 120-325
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 40

Conread position: 120-334
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 202, 17

Conread position: 131-331
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 34

Conread position: 141-344
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 177, 26

Conread position: 144-344
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 180, 20

Conread position: 153-344
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 184

Conread position: 164-345
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 111

Conread position: 166-345
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 172

Conread position: 174-330
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 147, 50

Conread position: 177-344
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 96

Conread position: 189-344
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 149

Conread position: 200-334
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.