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Cow genome map

           
Conread name:
           
Ss1.1-rfcc11b_a8.5
        

               
Conread position:
               
5-312
               

               
Cow position:
               
chr15:48376213-48375901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
25-328
               

               
Cow position:
               
chr15:16508995-16508698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
25-329
               

               
Cow position:
               
chr15:7236443-7236143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
25-344
               

               
Cow position:
               
chr15:29969225-29969525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
25-344
               

               
Cow position:
               
chr15:33123513-33123200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
25-345
               

               
Cow position:
               
chr15:8060120-8059803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
25-345
               

               
Cow position:
               
chr15:40063326-40063016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
27-344
               

               
Cow position:
               
chr15:53411221-53410919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
38-298
               

               
Cow position:
               
chr15:17397837-17397596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
41-316
               

               
Cow position:
               
chr15:8358771-8358510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
42-328
               

               
Cow position:
               
chr15:24719352-24719065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
47-330
               

               
Cow position:
               
chr15:2633607-2633877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr15:21966112-21965838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
56-345
               

               
Cow position:
               
chr15:44298745-44299031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
76-344
               

               
Cow position:
               
chr15:12418621-12418889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
76-345
               

               
Cow position:
               
chr15:2900165-2900434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
82-344
               

               
Cow position:
               
chr15:7262692-7262435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
241, 55
               

               
Conread position:
               
83-245
               

               
Cow position:
               
chr15:27635507-27635345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-278
               

               
Cow position:
               
chr15:6066433-6066624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-285
               

               
Cow position:
               
chr15:6280706-6280510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
83-286
               

               
Cow position:
               
chr15:42944527-42944730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
83-287
               

               
Cow position:
               
chr15:42318722-42318919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr15:1768645-1768433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr15:4924213-4923998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr15:7546960-7546748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr15:12494821-12495032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
83-302
               

               
Cow position:
               
chr15:1600666-1600443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr15:32066176-32066395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
83-310
               

               
Cow position:
               
chr15:7782324-7782539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
83-315
               

               
Cow position:
               
chr15:43293091-43293318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
83-320
               

               
Cow position:
               
chr15:6590076-6590309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr15:53323200-53322963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
181, 39
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr15:43533-43293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
83-327
               

               
Cow position:
               
chr15:20017398-20017642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-329
               

               
Cow position:
               
chr15:7329680-7329926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr15:5497135-5496895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr15:28488044-28488292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr15:35737867-35737629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
238, 35
               

               
Conread position:
               
83-331
               

               
Cow position:
               
chr15:334517-334272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
83-331
               

               
Cow position:
               
chr15:502175-501916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
83-331
               

               
Cow position:
               
chr15:12365487-12365250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:2645567-2645819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:3721953-3722202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:4639013-4638764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:4673324-4673065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:5009557-5009807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:6119492-6119248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:6153850-6154102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:8101535-8101285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 208
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:8411120-8410868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:8752978-8752725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:9432011-9431762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
244, 23
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:9736827-9737074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:9911219-9911468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:14574223-14574475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:14580067-14580319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:15345025-15345277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:16788697-16788949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:18265683-18265932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:20405656-20405908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:22290016-22290265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 54
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:32491810-32492060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr15:41786601-41786853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
83-343
               

               
Cow position:
               
chr15:36330378-36330638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:1784413-1784156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:4387833-4387573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:4948584-4948323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:6080784-6080529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:6382072-6382329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:6384474-6384735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:6615100-6614842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:7270420-7270164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:7840382-7840121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:7881997-7881739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:9013970-9013712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:9395045-9394784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:13429902-13429643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:14756081-14755835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
240, 35
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:16189690-16189951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:17075341-17075601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:18229144-18228883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:18578791-18578530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:19735963-19736224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:20412678-20412417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:21663665-21663923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:24297273-24297012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:24795966-24795706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:25132034-25131773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:25204927-25205187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:30727168-30727425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:31586314-31586578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:32713286-32713025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:37472486-37472746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
189, 39
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:42532000-42531739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr15:50149401-50149140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
83-345
               

               
Cow position:
               
chr15:280457-280722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
83-345
               

               
Cow position:
               
chr15:3258960-3259220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
83-345
               

               
Cow position:
               
chr15:7565083-7564821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
83-349
               

               
Cow position:
               
chr15:1878250-1878521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr15:2410618-2410805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
84-319
               

               
Cow position:
               
chr15:2212455-2212687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr15:7963879-7964124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
84-334
               

               
Cow position:
               
chr15:38982729-38982478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
84-368
               

               
Cow position:
               
chr15:17116972-17116689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr15:43739181-43739380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr15:10768900-10768671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
85-344
               

               
Cow position:
               
chr15:25490346-25490097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr15:2806801-2807056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr15:39447480-39447738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
89-249
               

               
Cow position:
               
chr15:27748083-27747923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
89-281
               

               
Cow position:
               
chr15:37631094-37630903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
89-309
               

               
Cow position:
               
chr15:51227186-51226968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr15:37459956-37459719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr15:46053823-46053581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr15:4727278-4727038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr15:20457126-20456890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
89-335
               

               
Cow position:
               
chr15:29341974-29342193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr15:6551689-6551943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr15:6563251-6562996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr15:21534056-21534303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr15:51767319-51767571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr15:4107256-4107507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr15:367400-367622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
92-331
               

               
Cow position:
               
chr15:9002159-9002398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr15:314011-314261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr15:21451768-21451506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr15:6480823-6480591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
231, 22
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr15:7982243-7982009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr15:21913909-21914149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
231, 71
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr15:24042332-24042093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
93-344
               

               
Cow position:
               
chr15:6224904-6224655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
94-235
               

               
Cow position:
               
chr15:36357016-36357154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
94-328
               

               
Cow position:
               
chr15:2927322-2927089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
94-334
               

               
Cow position:
               
chr15:24272887-24273118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
229, 7
               

               
Conread position:
               
94-334
               

               
Cow position:
               
chr15:24287420-24287648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
94-340
               

               
Cow position:
               
chr15:36279894-36280132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
94-344
               

               
Cow position:
               
chr15:10825537-10825291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr15:10799866-10799644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr15:2671125-2671355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr15:35645613-35645862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr15:581480-581248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
101-334
               

               
Cow position:
               
chr15:4824457-4824237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr15:59709-59488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
105-344
               

               
Cow position:
               
chr15:17216095-17216322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
218, 17
               

               
Conread position:
               
107-331
               

               
Cow position:
               
chr15:35845132-35844907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr15:13389300-13389523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
110-325
               

               
Cow position:
               
chr15:6460921-6460712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr15:25046857-25046636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
213, 29
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr15:5939619-5939843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr15:3153508-3153718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr15:49522661-49522451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 44
               

               
Conread position:
               
120-334
               

               
Cow position:
               
chr15:36623620-36623829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
120-340
               

               
Cow position:
               
chr15:51911493-51911714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr15:4767187-4766963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
203, 44
               

               
Conread position:
               
122-335
               

               
Cow position:
               
chr15:13679441-13679234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 42
               

               
Conread position:
               
123-344
               

               
Cow position:
               
chr15:610207-610421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
124-318
               

               
Cow position:
               
chr15:18021241-18021434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
124-334
               

               
Cow position:
               
chr15:25553024-25552818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
125-327
               

               
Cow position:
               
chr15:8030410-8030604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
161, 12
               

               
Conread position:
               
128-344
               

               
Cow position:
               
chr15:37393743-37393530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr15:29245746-29245961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr15:4952067-4951883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
145-334
               

               
Cow position:
               
chr15:21947158-21947347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
178, 105
               

               
Conread position:
               
157-329
               

               
Cow position:
               
chr15:2019135-2018961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
164-329
               

               
Cow position:
               
chr15:36145188-36145022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
167-331
               

               
Cow position:
               
chr15:1850474-1850638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 101
               

               
Conread position:
               
170-334
               

               
Cow position:
               
chr15:6330039-6329879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
178-344
               

               
Cow position:
               
chr15:4080239-4080405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
146, 159
               

               
Conread position:
               
178-344
               

               
Cow position:
               
chr15:42938775-42938609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 159
               

               
Conread position:
               
180-344
               

               
Cow position:
               
chr15:4687836-4687672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 153
               

               
Conread position:
               
207-334
               

               
Cow position:
               
chr15:12453387-12453516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 103
               
Show alignments to all cow chromosomes.