Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 25-254
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 17

Conread position: 25-305
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 23, 54

Conread position: 25-330
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 25-334
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 43

Conread position: 25-334
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 50

Conread position: 25-334
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 54

Conread position: 25-334
Cow position:
Alignm length: 314
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 24

Conread position: 25-344
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 43

Conread position: 25-345
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 54

Conread position: 27-316
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 14

Conread position: 27-329
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 14

Conread position: 27-331
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 63

Conread position: 27-334
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 119, 14

Conread position: 45-344
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 5

Conread position: 55-298
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 21

Conread position: 67-334
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 65

Conread position: 70-334
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 236, 12

Conread position: 70-334
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 6

Conread position: 76-298
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 89

Conread position: 82-343
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 241, 40

Conread position: 82-344
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 56

Conread position: 83-270
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 55

Conread position: 83-287
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 55

Conread position: 83-297
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 55

Conread position: 83-298
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-305
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-311
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 55

Conread position: 83-313
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 55

Conread position: 83-320
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 84

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 58

Conread position: 83-327
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 81

Conread position: 83-330
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 57

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 81

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 59

Conread position: 83-334
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 56

Conread position: 83-334
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 78

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 11, 56

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 56

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 81

Conread position: 83-336
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 37

Conread position: 83-340
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 181, 39

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 153

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 56

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 39

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 240, 35

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 49

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 54

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 39

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 241, 38

Conread position: 83-345
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 69

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-347
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 19

Conread position: 84-249
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 81

Conread position: 84-325
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 54

Conread position: 84-329
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 54

Conread position: 84-331
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 238, 5

Conread position: 84-334
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 57

Conread position: 84-334
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 54

Conread position: 84-344
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 5

Conread position: 85-325
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 217

Conread position: 85-330
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 35, 55

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 53

Conread position: 85-344
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 259

Conread position: 85-352
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 8

Conread position: 86-251
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 79

Conread position: 86-330
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 66

Conread position: 89-261
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 89-310
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 48

Conread position: 89-322
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 33, 76

Conread position: 89-327
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 49

Conread position: 89-334
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 33

Conread position: 89-334
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 235, 33

Conread position: 89-334
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 45

Conread position: 89-344
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 32, 76

Conread position: 90-334
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 48

Conread position: 93-331
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 72

Conread position: 93-334
Cow position:
Alignm length: 245
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 86

Conread position: 93-334
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 68

Conread position: 93-345
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 45

Conread position: 94-331
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 47

Conread position: 94-334
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 44

Conread position: 94-344
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 12

Conread position: 94-344
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 67

Conread position: 94-344
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 7

Conread position: 95-326
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 43

Conread position: 95-335
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 70

Conread position: 96-343
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 42

Conread position: 97-331
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 41

Conread position: 98-344
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 23, 40

Conread position: 101-334
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 40

Conread position: 108-334
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 33

Conread position: 116-344
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 209, 44

Conread position: 122-329
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 201, 29

Conread position: 124-357
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 212, 49

Conread position: 128-344
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 9

Conread position: 136-334
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 29

Conread position: 136-344
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 29

Conread position: 163-344
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 160, 60

Conread position: 164-331
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 159, 0

Conread position: 164-344
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 159, 173

Conread position: 164-344
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 159, 173

Conread position: 210-325
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 30

Show alignments to all cow chromosomes.