Cow genome map


           Conread name:
           Ss1.1-rfcc11b_a8.5
        

               Conread position:
               24-257
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               24-270
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               24-314
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               24-345
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               25-251
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               25-297
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               25-302
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               26-340
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               47-344
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               77-344
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               82-334
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               82-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               239, 40
               

               Conread position:
               83-247
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-251
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-266
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               83-266
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               83-267
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               83-296
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               83-310
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               177, 81
               

               Conread position:
               83-312
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               83-315
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               83-318
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-322
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               83-329
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               83-331
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               83-331
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 190
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               39, 83
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 56
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               241, 81
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               83-337
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               39, 82
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               39, 82
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               240, 39
               

               Conread position:
               83-345
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-345
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               83-345
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               83-345
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               83-347
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               85-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               89-306
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               89-325
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-334
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               89-334
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               229, 30
               

               Conread position:
               89-334
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-334
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               89-334
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-344
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               89-345
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               32, 234
               

               Conread position:
               90-334
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               90-345
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               92-325
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               92-345
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               93-322
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               93-334
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               93-334
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               93-334
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               93-345
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               94-344
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               96-348
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               97-330
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               98-331
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               101-334
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               223, 21
               

               Conread position:
               105-262
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               105-344
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               108-344
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               120-340
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               120-344
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               128-344
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               195, 36
               

               Conread position:
               129-334
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               131-344
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               133-344
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               157-344
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               166, 52
               

               Conread position:
               162-330
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               164-331
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               168-344
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               156, 169
               

               Conread position:
               179-344
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               144, 158
               
Show alignments to all cow chromosomes.