Cow genome map


           Conread name:
           Ss1.1-rfcc11b_a8.5
        

               Conread position:
               25-344
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               71-344
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               82-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               39, 83
               

               Conread position:
               83-233
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-235
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-258
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-265
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-284
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-288
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               83-314
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-319
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-326
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               83-330
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-331
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               240, 53
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               238, 37
               

               Conread position:
               83-340
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               83-343
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               180, 27
               

               Conread position:
               83-343
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               240, 37
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               83-345
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               84-319
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               84-344
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               85-280
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               85-327
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               89-330
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               6, 77
               

               Conread position:
               89-331
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-344
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-344
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               89-345
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-345
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               90-347
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               92-330
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               92-345
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               93-343
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               94-331
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               94-380
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               96-334
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               101-240
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               102-330
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               105-334
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               120-334
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               120-334
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               122-345
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               195, 15
               

               Conread position:
               125-344
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               125-405
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               255, 39
               

               Conread position:
               130-334
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               163-334
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               164-334
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               164-344
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               159, 117
               

               Conread position:
               164-345
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               165-334
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               183-344
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               141, 154
               

               Conread position:
               210-344
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 127
               
Show alignments to all cow chromosomes.