Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 18-346
Cow position: chr24:6345430-6345122 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 128, 36

Conread position: 24-334
Cow position: chr24:18267927-18268229 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 56

Conread position: 25-334
Cow position: chr24:16907897-16907600 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 96, 42

Conread position: 25-334
Cow position: chr24:17410996-17410712 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 25-344
Cow position: chr24:16208455-16208770 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 21

Conread position: 26-334
Cow position: chr24:19642477-19642179 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 53

Conread position: 27-334
Cow position: chr24:208450-208746 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 94, 14

Conread position: 41-305
Cow position: chr24:37198484-37198740 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 13

Conread position: 41-331
Cow position: chr24:34601883-34601594 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 57

Conread position: 47-311
Cow position: chr24:19704234-19703980 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 28

Conread position: 55-334
Cow position: chr24:6667237-6667516 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 12

Conread position: 71-345
Cow position: chr24:12088720-12088448 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 68

Conread position: 74-334
Cow position: chr24:41004997-41004745 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 249, 13

Conread position: 82-322
Cow position: chr24:14759388-14759151 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 56

Conread position: 82-344
Cow position: chr24:6657749-6658007 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 241, 39

Conread position: 83-258
Cow position: chr24:14350505-14350331 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-265
Cow position: chr24:19689074-19689252 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-308
Cow position: chr24:41231120-41230896 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 45

Conread position: 83-318
Cow position: chr24:29350801-29351030 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 5

Conread position: 83-325
Cow position: chr24:1454280-1454046 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 59

Conread position: 83-330
Cow position: chr24:6069352-6069600 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 39, 55

Conread position: 83-330
Cow position: chr24:12203859-12204103 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 39, 55

Conread position: 83-331
Cow position: chr24:6678548-6678302 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 238, 81

Conread position: 83-331
Cow position: chr24:12698511-12698760 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr24:6440259-6440007 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr24:11150618-11150867 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr24:11691493-11691742 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr24:16081981-16082233 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 55

Conread position: 83-334
Cow position: chr24:19184671-19184421 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 79

Conread position: 83-334
Cow position: chr24:29189793-29189541 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr24:36557074-36557310 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 23

Conread position: 83-344
Cow position: chr24:6021573-6021830 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:6411986-6411725 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:12333215-12333476 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:13234746-13234485 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position: chr24:14377150-14377416 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:16559798-16560058 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 53

Conread position: 83-344
Cow position: chr24:17323199-17322938 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:19835914-19835653 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:19884800-19884539 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:20284837-20285097 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:20366872-20366611 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:21248441-21248702 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr24:22973575-22973317 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position: chr24:40551130-40550872 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position: chr24:6326862-6327116 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position: chr24:29154866-29154615 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position: chr24:36724573-36724303 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 262

Conread position: 83-347
Cow position: chr24:12148594-12148848 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 55

Conread position: 83-423
Cow position: chr24:7064069-7063735 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 84-325
Cow position: chr24:33936415-33936186 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 179, 41

Conread position: 84-344
Cow position: chr24:19468084-19468350 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 54

Conread position: 85-327
Cow position: chr24:13300350-13300578 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 49

Conread position: 85-330
Cow position: chr24:14335369-14335129 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 80

Conread position: 85-396
Cow position: chr24:1297264-1297574 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 47

Conread position: 88-283
Cow position: chr24:2711927-2711734 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 188, 74

Conread position: 89-312
Cow position: chr24:42587515-42587291 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 63

Conread position: 89-327
Cow position: chr24:6472584-6472349 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 53

Conread position: 89-334
Cow position: chr24:22818339-22818098 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 76

Conread position: 89-344
Cow position: chr24:13190672-13190417 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 92-334
Cow position: chr24:12941593-12941359 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 60

Conread position: 93-300
Cow position: chr24:9072685-9072892 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 55

Conread position: 93-318
Cow position: chr24:14306721-14306492 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 93-329
Cow position: chr24:14276506-14276740 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 61

Conread position: 93-334
Cow position: chr24:17454634-17454876 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 28, 45

Conread position: 94-334
Cow position: chr24:14174236-14174476 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 34

Conread position: 94-377
Cow position: chr24:12911085-12910810 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 44

Conread position: 95-331
Cow position: chr24:38004447-38004683 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 96-334
Cow position: chr24:17312238-17312466 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 42

Conread position: 96-344
Cow position: chr24:6078934-6078686 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 42

Conread position: 96-344
Cow position: chr24:36132655-36132407 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 69

Conread position: 101-322
Cow position: chr24:8606835-8606614 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 37

Conread position: 101-330
Cow position: chr24:14317050-14317276 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 37

Conread position: 105-334
Cow position: chr24:14195378-14195604 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 33

Conread position: 105-344
Cow position: chr24:12126610-12126847 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 34

Conread position: 108-293
Cow position: chr24:16473452-16473274 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 34

Conread position: 109-345
Cow position: chr24:12267306-12267080 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 43

Conread position: 122-334
Cow position: chr24:29178272-29178485 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 37

Conread position: 125-344
Cow position: chr24:30895248-30895035 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 197, 12

Conread position: 127-328
Cow position: chr24:33029641-33029444 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 195, 37

Conread position: 137-344
Cow position: chr24:16647474-16647676 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 163

Conread position: 148-345
Cow position: chr24:14394076-14393881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 98

Conread position: 162-334
Cow position: chr24:14869887-14870059 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 164-344
Cow position: chr24:6962318-6962498 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 160, 173

Conread position: 164-344
Cow position: chr24:36712538-36712357 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 159, 0

Conread position: 164-345
Cow position: chr24:32848448-32848269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 159, 42

Conread position: 173-334
Cow position: chr24:7088595-7088757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 174-320
Cow position: chr24:25024427-25024283 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 118

Conread position: 194-334
Cow position: chr24:18212762-18212621 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 0

Show alignments to all cow chromosomes.