Cow genome map
Conread name: | Ss1.1-rfcc11b_a8.5 |
Conread position: | 25-330 |
Cow position: | chr27:28294394-28294690 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 219 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 24, 46 |
Conread position: | 25-344 |
Cow position: | chr27:21284723-21285038 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 224 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 73, 50 |
Conread position: | 25-352 |
Cow position: | chr27:3995424-3995745 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 54 |
Conread position: | 55-346 |
Cow position: | chr27:25965523-25965826 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 204 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 29, 84 |
Conread position: | 70-344 |
Cow position: | chr27:8200235-8199964 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 200 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 7, 17 |
Conread position: | 76-344 |
Cow position: | chr27:4981800-4981536 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 194 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 45, 62 |
Conread position: | 82-307 |
Cow position: | chr27:30571241-30571017 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 43, 56 |
Conread position: | 83-254 |
Cow position: | chr27:26599355-26599186 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 38, 82 |
Conread position: | 83-258 |
Cow position: | chr27:24296828-24297003 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 38, 82 |
Conread position: | 83-265 |
Cow position: | chr27:22798033-22798215 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-302 |
Cow position: | chr27:9332161-9331941 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-330 |
Cow position: | chr27:15034679-15034929 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 179 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 39, 83 |
Conread position: | 83-330 |
Cow position: | chr27:16031978-16032222 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 63, 35 |
Conread position: | 83-331 |
Cow position: | chr27:23318502-23318742 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 171 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 5, 81 |
Conread position: | 83-334 |
Cow position: | chr27:13900310-13900067 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 179 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 38, 54 |
Conread position: | 83-334 |
Cow position: | chr27:25085969-25085721 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 178 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 38, 173 |
Conread position: | 83-334 |
Cow position: | chr27:25801761-25802011 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 83-334 |
Cow position: | chr27:27193932-27194176 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 181 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 239, 27 |
Conread position: | 83-339 |
Cow position: | chr27:5985278-5985021 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 183 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-343 |
Cow position: | chr27:15273660-15273916 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 78 |
Conread position: | 83-344 |
Cow position: | chr27:3233108-3233366 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 38, 58 |
Conread position: | 83-344 |
Cow position: | chr27:3991429-3991161 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 192 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 38, 89 |
Conread position: | 83-344 |
Cow position: | chr27:9990798-9991051 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 182 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 240, 38 |
Conread position: | 83-344 |
Cow position: | chr27:15634918-15635176 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 187 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 38, 58 |
Conread position: | 83-344 |
Cow position: | chr27:19524299-19524557 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 187 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-344 |
Cow position: | chr27:22742969-22743227 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 192 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-344 |
Cow position: | chr27:27288914-27288661 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 184 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 83-344 |
Cow position: | chr27:30034581-30034321 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 82 |
Conread position: | 83-400 |
Cow position: | chr27:797194-797507 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 183 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 39, 55 |
Conread position: | 84-330 |
Cow position: | chr27:27730057-27730297 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 177 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 37, 54 |
Conread position: | 84-331 |
Cow position: | chr27:14270612-14270858 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 176 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 27, 81 |
Conread position: | 84-347 |
Cow position: | chr27:22012945-22013203 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 37, 54 |
Conread position: | 85-334 |
Cow position: | chr27:26327473-26327227 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 174 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 36, 56 |
Conread position: | 89-330 |
Cow position: | chr27:5913346-5913104 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 32, 76 |
Conread position: | 89-334 |
Cow position: | chr27:8591476-8591229 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 168 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 14, 77 |
Conread position: | 89-334 |
Cow position: | chr27:28923395-28923151 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 45 |
Conread position: | 92-344 |
Cow position: | chr27:5995067-5995316 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 175, 49 |
Conread position: | 93-341 |
Cow position: | chr27:11433535-11433289 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 28, 74 |
Conread position: | 93-344 |
Cow position: | chr27:166511-166753 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 28, 49 |
Conread position: | 96-334 |
Cow position: | chr27:17567527-17567297 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 227, 5 |
Conread position: | 96-334 |
Cow position: | chr27:20980969-20980738 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 25, 48 |
Conread position: | 96-344 |
Cow position: | chr27:12263021-12263270 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 25, 42 |
Conread position: | 101-302 |
Cow position: | chr27:1535589-1535388 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 159 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 20, 64 |
Conread position: | 104-325 |
Cow position: | chr27:28686141-28686361 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 153 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 17, 58 |
Conread position: | 105-321 |
Cow position: | chr27:25884509-25884728 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 16, 65 |
Conread position: | 105-339 |
Cow position: | chr27:23293953-23293723 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 108-335 |
Cow position: | chr27:25786417-25786634 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 14, 57 |
Conread position: | 108-344 |
Cow position: | chr27:66415-66651 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 13, 30 |
Conread position: | 109-331 |
Cow position: | chr27:24573701-24573924 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 16, 29 |
Conread position: | 121-306 |
Cow position: | chr27:1502438-1502617 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 128 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 121-345 |
Cow position: | chr27:6016813-6016593 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 203, 41 |
Conread position: | 125-334 |
Cow position: | chr27:26553063-26553272 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 21, 10 |
Conread position: | 126-315 |
Cow position: | chr27:30447920-30448108 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 30, 151 |
Conread position: | 133-344 |
Cow position: | chr27:1211734-1211524 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 14, 32 |
Conread position: | 145-297 |
Cow position: | chr27:22830663-22830510 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 164-344 |
Cow position: | chr27:1676227-1676407 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 160, 173 |
Conread position: | 164-344 |
Cow position: | chr27:4802853-4803033 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 137 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 160, 173 |
Conread position: | 164-344 |
Cow position: | chr27:21453764-21453584 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 136 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 160, 173 |
Conread position: | 178-298 |
Cow position: | chr27:14231770-14231890 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 188-345 |
Cow position: | chr27:10324805-10324962 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 135, 154 |
Conread position: | 195-330 |
Cow position: | chr27:25059445-25059309 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 102 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 210-345 |
Cow position: | chr27:27278047-27277911 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 71, 128 |
Show alignments to all cow chromosomes.