Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 24-333
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 22

Conread position: 24-336
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 43

Conread position: 25-319
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 54

Conread position: 25-330
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 293, 24

Conread position: 25-344
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 125, 23

Conread position: 26-315
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 31

Conread position: 76-334
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 62

Conread position: 76-334
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 45, 89

Conread position: 76-344
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 89

Conread position: 83-251
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 55

Conread position: 83-258
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 83-265
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-265
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 69

Conread position: 83-327
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 184, 39

Conread position: 83-330
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 83-330
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 55

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 57

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 85

Conread position: 83-331
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 55

Conread position: 83-331
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-333
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 83

Conread position: 83-334
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 240, 54

Conread position: 83-334
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 35, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 193

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 10

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 38

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 59

Conread position: 83-340
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 55

Conread position: 83-341
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 41

Conread position: 83-343
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 83-343
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 81

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 198

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 57

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 10

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 82

Conread position: 83-347
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 55

Conread position: 83-375
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-385
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 69

Conread position: 84-343
Cow position:
Alignm length: 261
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 36

Conread position: 84-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 54

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 80

Conread position: 85-334
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 233

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 53

Conread position: 86-329
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 48

Conread position: 86-334
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 238, 18

Conread position: 89-330
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 76

Conread position: 89-334
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 75

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 76

Conread position: 89-335
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 39

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 49

Conread position: 89-345
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 188

Conread position: 89-345
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 188

Conread position: 93-241
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 69

Conread position: 93-334
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 48

Conread position: 93-334
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 71

Conread position: 93-334
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 72

Conread position: 93-339
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 45

Conread position: 94-328
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 67

Conread position: 94-345
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 228, 6

Conread position: 95-318
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 43

Conread position: 95-368
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 228, 27

Conread position: 96-329
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 68

Conread position: 98-335
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 40

Conread position: 101-344
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 37

Conread position: 109-315
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 32

Conread position: 112-334
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 26

Conread position: 113-331
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 19

Conread position: 120-344
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 17

Conread position: 120-344
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 17

Conread position: 127-344
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 10

Conread position: 136-344
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 136-344
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 29

Conread position: 141-340
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 182, 23

Conread position: 149-344
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 189

Conread position: 155-320
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 158-334
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 66

Conread position: 164-334
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 145

Conread position: 164-399
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 179

Conread position: 166-334
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 158, 0

Conread position: 168-347
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 169

Show alignments to all cow chromosomes.