Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 24-334
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 53

Conread position: 25-328
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 54

Conread position: 25-344
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 54

Conread position: 25-344
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 129

Conread position: 27-334
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 50

Conread position: 27-344
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 27-345
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 26

Conread position: 29-344
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 47

Conread position: 76-334
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 46

Conread position: 82-340
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 56

Conread position: 82-344
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 51

Conread position: 83-251
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 83-288
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 38

Conread position: 83-298
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 55

Conread position: 83-305
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 50

Conread position: 83-310
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-315
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-320
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 59

Conread position: 83-330
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 82

Conread position: 83-331
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 82

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 58

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 39

Conread position: 83-334
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 177, 38

Conread position: 83-338
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-339
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 55

Conread position: 83-339
Cow position:
Alignm length: 261
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 56

Conread position: 83-343
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 23

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 204

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 18

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 62

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 115, 39

Conread position: 83-344
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 241, 54

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 39, 55

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 57

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 55

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 58

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 12

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 54

Conread position: 83-382
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 55

Conread position: 83-384
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 61

Conread position: 84-334
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 57

Conread position: 84-334
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 37, 54

Conread position: 84-334
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 81

Conread position: 84-344
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 54

Conread position: 84-344
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 81

Conread position: 84-344
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 54

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 53

Conread position: 85-334
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 53

Conread position: 86-331
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 55

Conread position: 86-345
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 52

Conread position: 88-330
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 77

Conread position: 89-296
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 31

Conread position: 89-311
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 49

Conread position: 92-344
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 46

Conread position: 93-329
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 24

Conread position: 93-334
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 28, 45

Conread position: 93-334
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 146

Conread position: 94-330
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 6

Conread position: 94-330
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 44

Conread position: 94-345
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 44

Conread position: 101-319
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 174

Conread position: 101-330
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 55

Conread position: 102-344
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 36

Conread position: 106-345
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 32

Conread position: 108-327
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 30

Conread position: 113-329
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 25

Conread position: 116-344
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 205, 25

Conread position: 120-331
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 17

Conread position: 120-344
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 17

Conread position: 122-359
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 15

Conread position: 130-344
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 7

Conread position: 136-344
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 204

Conread position: 161-327
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 164-330
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 157, 0

Conread position: 164-334
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 162

Show alignments to all cow chromosomes.