Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 24-334
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 47

Conread position: 25-330
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 39

Conread position: 25-334
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 51

Conread position: 25-334
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 40

Conread position: 25-334
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 142

Conread position: 25-344
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 54

Conread position: 25-344
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 24, 54

Conread position: 25-345
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 268, 29

Conread position: 25-411
Cow position:
Alignm length: 391
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 34, 47

Conread position: 27-315
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 94, 14

Conread position: 27-340
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 91, 47

Conread position: 27-346
Cow position:
Alignm length: 325
Alignm identity: 229
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 52

Conread position: 27-358
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 53

Conread position: 29-334
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 93

Conread position: 47-334
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 275, 29

Conread position: 68-334
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 7

Conread position: 72-330
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 30

Conread position: 76-344
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 62

Conread position: 83-235
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 55

Conread position: 83-244
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 20

Conread position: 83-265
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 55

Conread position: 83-273
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-293
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 45

Conread position: 83-297
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 30

Conread position: 83-299
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 55

Conread position: 83-311
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 80

Conread position: 83-315
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 78

Conread position: 83-315
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 54

Conread position: 83-320
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 58

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 83-330
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 85

Conread position: 83-330
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 240, 39

Conread position: 83-330
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 82

Conread position: 83-331
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 55

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 79

Conread position: 83-331
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 78

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 82

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 11

Conread position: 83-334
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 82

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 56

Conread position: 83-343
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 55

Conread position: 83-344
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 51

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 54

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 258

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 64, 35

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 59

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 82

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 10

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 166, 38

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 47

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 241, 36

Conread position: 83-345
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 62

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 58

Conread position: 83-385
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 58

Conread position: 84-334
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 73

Conread position: 84-334
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 79

Conread position: 85-292
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 53

Conread position: 85-305
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 85-344
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 56

Conread position: 85-344
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 42

Conread position: 86-327
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 79

Conread position: 89-328
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 49

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 49

Conread position: 89-334
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 234, 66

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 49

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 49

Conread position: 89-345
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 89-345
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 73

Conread position: 90-352
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 16, 53

Conread position: 93-330
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 44

Conread position: 93-344
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 72

Conread position: 94-334
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 57

Conread position: 94-334
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 44

Conread position: 94-334
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 137

Conread position: 95-345
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 51, 42

Conread position: 97-331
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 64

Conread position: 101-344
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 60

Conread position: 102-318
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 171

Conread position: 102-334
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 19, 50

Conread position: 102-344
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 36

Conread position: 103-345
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 220, 13

Conread position: 105-344
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 33

Conread position: 105-344
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 36

Conread position: 108-326
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 44

Conread position: 120-334
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 161, 43

Conread position: 121-330
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 43

Conread position: 121-344
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 123-334
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 14

Conread position: 127-345
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 37

Conread position: 130-325
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 34

Conread position: 137-337
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 141-344
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 181, 23

Conread position: 152-345
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 124

Conread position: 156-364
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 165, 20

Conread position: 164-330
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 42

Conread position: 164-330
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 164-334
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 9

Conread position: 164-344
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 160, 83

Conread position: 164-344
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 173

Conread position: 167-344
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 157, 170

Conread position: 168-334
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 155, 0

Conread position: 170-334
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 154, 68

Conread position: 170-345
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 86

Conread position: 175-334
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 94

Conread position: 183-344
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 7

Show alignments to all cow chromosomes.