Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 1-334
Cow position: chr5:48534265-48533941 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 9

Conread position: 25-280
Cow position: chr5:52436308-52436061 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 50

Conread position: 25-286
Cow position: chr5:41525246-41525495 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 51

Conread position: 25-321
Cow position: chr5:6586159-6586446 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 54

Conread position: 25-333
Cow position: chr5:14782867-14783152 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 55

Conread position: 25-344
Cow position: chr5:11922824-11923137 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 54

Conread position: 25-344
Cow position: chr5:58190452-58190765 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 56

Conread position: 25-345
Cow position: chr5:55682919-55682611 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 54

Conread position: 25-353
Cow position: chr5:25929385-25929703 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 33

Conread position: 27-344
Cow position: chr5:12641140-12641449 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 52

Conread position: 28-298
Cow position: chr5:49909926-49909666 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 48

Conread position: 37-318
Cow position: chr5:49756184-49756462 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 188, 0

Conread position: 41-336
Cow position: chr5:33281959-33282253 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 82

Conread position: 42-306
Cow position: chr5:10097743-10098004 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 65

Conread position: 71-343
Cow position: chr5:47341986-47341714 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 70

Conread position: 75-334
Cow position: chr5:63389545-63389803 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 47

Conread position: 76-334
Cow position: chr5:46736023-46736279 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 65

Conread position: 83-248
Cow position: chr5:37379356-37379193 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 55

Conread position: 83-249
Cow position: chr5:34525470-34525309 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 20

Conread position: 83-258
Cow position: chr5:70532154-70532328 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 82

Conread position: 83-261
Cow position: chr5:23667901-23668079 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 82

Conread position: 83-265
Cow position: chr5:37423402-37423221 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 6

Conread position: 83-270
Cow position: chr5:35496428-35496241 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 53

Conread position: 83-273
Cow position: chr5:444774-444584 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 55

Conread position: 83-300
Cow position: chr5:18275245-18275033 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 55

Conread position: 83-302
Cow position: chr5:73486671-73486890 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 57

Conread position: 83-306
Cow position: chr5:35341561-35341341 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 182

Conread position: 83-306
Cow position: chr5:46649399-46649168 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 82

Conread position: 83-310
Cow position: chr5:4016838-4017061 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 63, 39

Conread position: 83-319
Cow position: chr5:10841142-10841372 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-320
Cow position: chr5:45180843-45181077 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 58

Conread position: 83-329
Cow position: chr5:49222246-49222494 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 55

Conread position: 83-329
Cow position: chr5:58244570-58244815 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 64, 38

Conread position: 83-331
Cow position: chr5:34698733-34698487 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 58

Conread position: 83-331
Cow position: chr5:49520966-49520718 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 81

Conread position: 83-334
Cow position: chr5:14544051-14544300 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 56

Conread position: 83-334
Cow position: chr5:14877863-14878110 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 42

Conread position: 83-334
Cow position: chr5:23685110-23685351 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 53

Conread position: 83-334
Cow position: chr5:26625953-26626206 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr5:28015314-28015067 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 56

Conread position: 83-334
Cow position: chr5:30581588-30581337 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr5:31708839-31708585 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr5:40348033-40348280 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 10

Conread position: 83-334
Cow position: chr5:40932473-40932211 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 83-334
Cow position: chr5:41979749-41979507 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr5:46627017-46627259 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 38

Conread position: 83-334
Cow position: chr5:46670560-46670307 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 51

Conread position: 83-334
Cow position: chr5:47828073-47828319 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position: chr5:55993190-55993438 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 25

Conread position: 83-334
Cow position: chr5:64779754-64780006 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-336
Cow position: chr5:47358970-47358719 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-339
Cow position: chr5:23958074-23958331 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 55

Conread position: 83-343
Cow position: chr5:45702571-45702314 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-343
Cow position: chr5:54786858-54787123 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 176

Conread position: 83-344
Cow position: chr5:1229037-1228781 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 37

Conread position: 83-344
Cow position: chr5:1339671-1339931 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:3501874-3502131 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:3966688-3966431 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 85

Conread position: 83-344
Cow position: chr5:4755925-4756185 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:4964123-4964379 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 186, 39

Conread position: 83-344
Cow position: chr5:5105474-5105220 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 35

Conread position: 83-344
Cow position: chr5:5925711-5925972 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:7276083-7275822 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:10774007-10774266 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:11957219-11957486 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 260

Conread position: 83-344
Cow position: chr5:12730460-12730721 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:18120223-18120484 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position: chr5:18559153-18559410 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 203, 42

Conread position: 83-344
Cow position: chr5:24100901-24100640 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:24644607-24644869 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 61

Conread position: 83-344
Cow position: chr5:29031523-29031262 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:29433544-29433793 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 240, 36

Conread position: 83-344
Cow position: chr5:30567526-30567264 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:32775026-32774768 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:37734600-37734342 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position: chr5:41066432-41066171 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:42507012-42506751 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:44710130-44710390 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:46792101-46791840 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:58198273-58198015 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:59062894-59062633 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:59145623-59145362 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position: chr5:70617195-70616936 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 85

Conread position: 83-345
Cow position: chr5:7583741-7583998 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 78

Conread position: 83-345
Cow position: chr5:10921095-10920834 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 58

Conread position: 83-345
Cow position: chr5:27196830-27197088 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 55

Conread position: 83-369
Cow position: chr5:27005127-27004845 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 82

Conread position: 83-370
Cow position: chr5:54858846-54859126 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 78

Conread position: 83-441
Cow position: chr5:26076950-26077313 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 84-302
Cow position: chr5:3788475-3788259 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 9

Conread position: 84-311
Cow position: chr5:40922443-40922657 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 54

Conread position: 84-313
Cow position: chr5:7756537-7756308 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 81

Conread position: 84-315
Cow position: chr5:36874541-36874770 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 41

Conread position: 84-331
Cow position: chr5:48226321-48226568 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 54

Conread position: 84-334
Cow position: chr5:18703910-18703660 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 55

Conread position: 84-334
Cow position: chr5:24219412-24219157 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 77

Conread position: 84-344
Cow position: chr5:10514025-10514285 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 54

Conread position: 84-344
Cow position: chr5:13407848-13407588 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 84-344
Cow position: chr5:54928662-54928922 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 54

Conread position: 85-345
Cow position: chr5:57001751-57001492 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 80

Conread position: 85-374
Cow position: chr5:14657250-14657538 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 62, 38

Conread position: 89-261
Cow position: chr5:27063123-27063295 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 49

Conread position: 89-298
Cow position: chr5:40791101-40790894 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 97

Conread position: 89-309
Cow position: chr5:46003393-46003613 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 49

Conread position: 89-321
Cow position: chr5:28024946-28024725 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 49

Conread position: 89-325
Cow position: chr5:47202030-47202262 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 72

Conread position: 89-327
Cow position: chr5:52612119-52612354 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 234, 33

Conread position: 89-334
Cow position: chr5:38661578-38661332 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 50

Conread position: 89-334
Cow position: chr5:46666252-46666005 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 77

Conread position: 89-339
Cow position: chr5:3823132-3822885 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 54

Conread position: 89-340
Cow position: chr5:10854572-10854822 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 234, 33

Conread position: 89-344
Cow position: chr5:9056907-9056652 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 49

Conread position: 89-345
Cow position: chr5:25902216-25902470 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 76

Conread position: 89-354
Cow position: chr5:41927724-41927992 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 91

Conread position: 90-336
Cow position: chr5:18399243-18399483 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 74

Conread position: 91-287
Cow position: chr5:56541269-56541465 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 47

Conread position: 92-330
Cow position: chr5:24296847-24296612 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 46

Conread position: 93-256
Cow position: chr5:34219261-34219429 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 93-334
Cow position: chr5:32165656-32165887 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 57

Conread position: 93-334
Cow position: chr5:59284549-59284307 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 47

Conread position: 93-343
Cow position: chr5:21523569-21523822 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 45

Conread position: 93-345
Cow position: chr5:4352867-4352627 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 68

Conread position: 94-334
Cow position: chr5:23846878-23847118 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 94-344
Cow position: chr5:6152650-6152898 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 26, 44

Conread position: 94-347
Cow position: chr5:11288688-11288939 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 21

Conread position: 101-344
Cow position: chr5:12680587-12680827 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 40

Conread position: 101-344
Cow position: chr5:27490180-27489944 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 221, 59

Conread position: 102-296
Cow position: chr5:51167072-51167261 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 36

Conread position: 102-334
Cow position: chr5:31120971-31121202 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 36

Conread position: 102-344
Cow position: chr5:50390873-50391115 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 63

Conread position: 106-344
Cow position: chr5:18884334-18884564 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 59

Conread position: 107-525
Cow position: chr5:11633039-11633453 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 6

Conread position: 108-344
Cow position: chr5:280419-280183 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 30

Conread position: 112-334
Cow position: chr5:59770055-59769834 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 26

Conread position: 115-316
Cow position: chr5:47470008-47469811 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 22

Conread position: 119-315
Cow position: chr5:61232347-61232542 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 122-352
Cow position: chr5:45843429-45843657 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 197, 42

Conread position: 123-344
Cow position: chr5:51745442-51745222 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 14

Conread position: 125-344
Cow position: chr5:27172897-27172686 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 196, 35

Conread position: 144-339
Cow position: chr5:58150593-58150786 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 29

Conread position: 157-327
Cow position: chr5:21221554-21221724 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 165, 78

Conread position: 162-310
Cow position: chr5:68592947-68592803 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 164-334
Cow position: chr5:43989237-43989066 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 0

Conread position: 164-344
Cow position: chr5:49118164-49118344 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 159, 173

Conread position: 166-334
Cow position: chr5:306222-306390 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 158, 82

Conread position: 177-327
Cow position: chr5:28223287-28223438 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 181-334
Cow position: chr5:28332383-28332537 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 146, 0

Conread position: 195-334
Cow position: chr5:48806297-48806437 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 0

Show alignments to all cow chromosomes.