Cow genome map

Conread name: Ss1.1-rfcc11b_a8.5

Conread position: 24-326
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 55

Conread position: 25-328
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 53

Conread position: 25-328
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 52

Conread position: 25-330
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 54

Conread position: 25-334
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 54

Conread position: 25-334
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 66

Conread position: 25-344
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 54

Conread position: 25-344
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 24

Conread position: 26-318
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 15

Conread position: 26-331
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 42

Conread position: 27-251
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 14

Conread position: 27-279
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 14

Conread position: 27-331
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 14

Conread position: 40-328
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 28

Conread position: 41-331
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 43

Conread position: 41-345
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 27

Conread position: 71-273
Cow position:
Alignm length: 205
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 16

Conread position: 81-319
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 81

Conread position: 82-343
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 39, 82

Conread position: 83-252
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 82

Conread position: 83-253
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 55

Conread position: 83-262
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 83-276
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 82

Conread position: 83-280
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 55

Conread position: 83-288
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 55

Conread position: 83-302
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 58

Conread position: 83-302
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 55

Conread position: 83-302
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 155

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 55

Conread position: 83-325
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-328
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 53

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 23

Conread position: 83-330
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 83-330
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 243, 42

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 55

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 49

Conread position: 83-330
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 82

Conread position: 83-331
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 241, 32

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 82

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 81

Conread position: 83-334
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 241, 38

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 78

Conread position: 83-334
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 55

Conread position: 83-334
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 38

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 23

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 50

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-334
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 82

Conread position: 83-343
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 55

Conread position: 83-343
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 58

Conread position: 83-343
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 27

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 180

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 58

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 241, 35

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 82

Conread position: 83-344
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 40

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 83-344
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 55

Conread position: 83-345
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 55

Conread position: 84-251
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 54

Conread position: 84-322
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 5

Conread position: 84-334
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 54

Conread position: 85-343
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 80

Conread position: 85-344
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 36, 53

Conread position: 89-259
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 76

Conread position: 89-310
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 149

Conread position: 89-330
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 76

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 89-334
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 37

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 58, 48

Conread position: 89-334
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 76

Conread position: 89-334
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 89-344
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 76

Conread position: 89-344
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 32, 49

Conread position: 89-378
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 76

Conread position: 92-330
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 46

Conread position: 92-334
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 73

Conread position: 93-311
Cow position:
Alignm length: 219
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 93-334
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 72

Conread position: 93-344
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 230, 27

Conread position: 93-344
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 45

Conread position: 93-344
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 28, 45

Conread position: 94-340
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 67

Conread position: 94-345
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 7

Conread position: 95-333
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 69

Conread position: 96-344
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 42

Conread position: 100-343
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 6, 60

Conread position: 101-334
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 37

Conread position: 102-344
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 62

Conread position: 105-331
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 16, 33

Conread position: 105-334
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 33

Conread position: 105-334
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 33

Conread position: 109-345
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 185, 11

Conread position: 120-344
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 17

Conread position: 121-344
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 16

Conread position: 125-306
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 125-334
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 12

Conread position: 127-330
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 129-292
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 129-344
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 195, 35

Conread position: 130-302
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 136-402
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 29

Conread position: 144-330
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 179, 20

Conread position: 145-334
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 19

Conread position: 164-328
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 23

Conread position: 164-330
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 159, 108

Conread position: 164-331
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 154, 13

Conread position: 164-334
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 157, 0

Conread position: 164-344
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 174

Conread position: 164-344
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 173

Conread position: 164-345
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 23

Conread position: 168-315
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 168-344
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 170

Conread position: 173-316
Cow position:
Alignm length: 144
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 178-331
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 91

Conread position: 183-344
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 154

Conread position: 196-344
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 141

Conread position: 200-328
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 0

Show alignments to all cow chromosomes.