Cow genome map
| Conread name: | Ss1.1-rfcc11b_a8.5 |
| Conread position: | 24-326 |
| Cow position: | chr9:14535404-14535108 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 25-328 |
| Cow position: | chr9:20780275-20779977 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 25-328 |
| Cow position: | chr9:33950839-33951125 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 25-330 |
| Cow position: | chr9:11504042-11503751 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 25-334 |
| Cow position: | chr9:202921-203221 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 25-334 |
| Cow position: | chr9:3577113-3577415 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 25-334 |
| Cow position: | chr9:54680372-54680684 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 25-344 |
| Cow position: | chr9:44203699-44204012 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 25-344 |
| Cow position: | chr9:46040886-46041196 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 26-318 |
| Cow position: | chr9:1639108-1638835 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 26-331 |
| Cow position: | chr9:4648257-4648553 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 27-251 |
| Cow position: | chr9:34240737-34240949 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 27-279 |
| Cow position: | chr9:52525520-52525279 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 27-331 |
| Cow position: | chr9:31093705-31093990 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 40-328 |
| Cow position: | chr9:46242018-46241739 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 41-331 |
| Cow position: | chr9:2552070-2552348 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 41-345 |
| Cow position: | chr9:59430875-59430578 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 71-273 |
| Cow position: | chr9:10746342-10746544 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 81-319 |
| Cow position: | chr9:9327718-9327950 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 82-343 |
| Cow position: | chr9:2630920-2630659 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 83-252 |
| Cow position: | chr9:12726767-12726598 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-253 |
| Cow position: | chr9:26421658-26421825 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-262 |
| Cow position: | chr9:791995-792169 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 83-276 |
| Cow position: | chr9:43302902-43303093 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-280 |
| Cow position: | chr9:59480531-59480728 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-288 |
| Cow position: | chr9:30674388-30674183 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-302 |
| Cow position: | chr9:5006294-5006078 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 83-302 |
| Cow position: | chr9:28658731-28658950 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-302 |
| Cow position: | chr9:52722743-52722524 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 83-325 |
| Cow position: | chr9:1999525-1999761 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-325 |
| Cow position: | chr9:4941172-4941414 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-325 |
| Cow position: | chr9:8656352-8656585 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-325 |
| Cow position: | chr9:48795975-48796217 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-328 |
| Cow position: | chr9:50326162-50325921 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 83-330 |
| Cow position: | chr9:2485300-2485544 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 83-330 |
| Cow position: | chr9:9515378-9515140 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-330 |
| Cow position: | chr9:20181106-20181345 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 243, 42 |
| Conread position: | 83-330 |
| Cow position: | chr9:21411627-21411382 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-330 |
| Cow position: | chr9:22320386-22320627 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-330 |
| Cow position: | chr9:22437264-22437025 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 83-330 |
| Cow position: | chr9:33593456-33593208 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-331 |
| Cow position: | chr9:20175395-20175633 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 241, 32 |
| Conread position: | 83-334 |
| Cow position: | chr9:128873-129124 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-334 |
| Cow position: | chr9:1983136-1982889 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 83-334 |
| Cow position: | chr9:2213463-2213214 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 241, 38 |
| Conread position: | 83-334 |
| Cow position: | chr9:2680892-2680640 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:3729144-3728896 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 83-334 |
| Cow position: | chr9:6251588-6251328 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:7059745-7059997 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:12182103-12182359 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 83-334 |
| Cow position: | chr9:28024127-28023876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 83-334 |
| Cow position: | chr9:28356883-28356632 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 83-334 |
| Cow position: | chr9:31091503-31091251 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:35936691-35936946 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:37175122-37174870 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-334 |
| Cow position: | chr9:47005059-47004807 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-343 |
| Cow position: | chr9:17900249-17900504 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-343 |
| Cow position: | chr9:31809900-31809643 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 83-343 |
| Cow position: | chr9:59538422-59538162 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:1249676-1249938 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:1728987-1729247 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:2807039-2807300 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:5534900-5535159 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:8164579-8164831 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 83-344 |
| Cow position: | chr9:9015392-9015132 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:9198436-9198175 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 180 |
| Conread position: | 83-344 |
| Cow position: | chr9:17062070-17062329 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:18507509-18507767 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 83-344 |
| Cow position: | chr9:28680293-28680032 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:30829073-30828812 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:34770474-34770225 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 241, 35 |
| Conread position: | 83-344 |
| Cow position: | chr9:35681727-35681468 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-344 |
| Cow position: | chr9:35707893-35707634 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 83-344 |
| Cow position: | chr9:40416713-40416971 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 83-344 |
| Cow position: | chr9:42312010-42311752 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:47044288-47044027 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:51179854-51180115 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:59196173-59195918 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-344 |
| Cow position: | chr9:64012903-64013164 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-345 |
| Cow position: | chr9:6708738-6709000 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-345 |
| Cow position: | chr9:10939041-10938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-345 |
| Cow position: | chr9:13473461-13473722 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 83-345 |
| Cow position: | chr9:16177912-16177652 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 83-345 |
| Cow position: | chr9:32971695-32971432 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 84-251 |
| Cow position: | chr9:10644383-10644216 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 84-322 |
| Cow position: | chr9:5627132-5626898 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 84-334 |
| Cow position: | chr9:778499-778750 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 85-343 |
| Cow position: | chr9:649728-649982 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 85-344 |
| Cow position: | chr9:45875835-45875577 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 89-259 |
| Cow position: | chr9:18023259-18023095 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 89-310 |
| Cow position: | chr9:9561152-9561375 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 89-330 |
| Cow position: | chr9:60324670-60324911 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 89-334 |
| Cow position: | chr9:1741527-1741770 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-334 |
| Cow position: | chr9:2865678-2865915 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 89-334 |
| Cow position: | chr9:19156969-19157214 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 89-334 |
| Cow position: | chr9:38678447-38678201 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 89-334 |
| Cow position: | chr9:59508849-59509100 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 89-344 |
| Cow position: | chr9:6884641-6884388 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 89-344 |
| Cow position: | chr9:56302128-56302383 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 89-378 |
| Cow position: | chr9:61238628-61238909 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 92-330 |
| Cow position: | chr9:25922476-25922704 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 92-334 |
| Cow position: | chr9:4307039-4307284 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 93-311 |
| Cow position: | chr9:44820641-44820427 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 93-334 |
| Cow position: | chr9:29333922-29333679 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 93-344 |
| Cow position: | chr9:8096592-8096345 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 230, 27 |
| Conread position: | 93-344 |
| Cow position: | chr9:17303659-17303907 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 93-344 |
| Cow position: | chr9:17313812-17313561 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 94-340 |
| Cow position: | chr9:35593773-35594024 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 94-345 |
| Cow position: | chr9:50775150-50774909 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 95-333 |
| Cow position: | chr9:29788387-29788622 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 96-344 |
| Cow position: | chr9:14044929-14044689 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 100-343 |
| Cow position: | chr9:49301928-49302173 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 101-334 |
| Cow position: | chr9:60461435-60461669 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 102-344 |
| Cow position: | chr9:45898052-45897811 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 105-331 |
| Cow position: | chr9:18834031-18834256 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 105-334 |
| Cow position: | chr9:1994114-1994338 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 105-334 |
| Cow position: | chr9:24422653-24422884 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 109-345 |
| Cow position: | chr9:10109670-10109434 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 185, 11 |
| Conread position: | 120-344 |
| Cow position: | chr9:64006262-64006484 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 121-344 |
| Cow position: | chr9:2872630-2872408 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 125-306 |
| Cow position: | chr9:5609448-5609621 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 125-334 |
| Cow position: | chr9:7005004-7004798 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 127-330 |
| Cow position: | chr9:20940693-20940496 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 129-292 |
| Cow position: | chr9:11339426-11339587 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 129-344 |
| Cow position: | chr9:2607914-2607700 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 195, 35 |
| Conread position: | 130-302 |
| Cow position: | chr9:44461360-44461530 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 136-402 |
| Cow position: | chr9:22433490-22433210 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 144-330 |
| Cow position: | chr9:44521196-44521010 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 179, 20 |
| Conread position: | 145-334 |
| Cow position: | chr9:19077925-19077738 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 19 |
| Conread position: | 164-328 |
| Cow position: | chr9:7090240-7090401 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 164-330 |
| Cow position: | chr9:26569523-26569357 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 159, 108 |
| Conread position: | 164-331 |
| Cow position: | chr9:11286920-11287087 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 164-334 |
| Cow position: | chr9:42903609-42903780 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 164-344 |
| Cow position: | chr9:29024795-29024976 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 174 |
| Conread position: | 164-344 |
| Cow position: | chr9:50792960-50792780 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 160, 173 |
| Conread position: | 164-345 |
| Cow position: | chr9:220305-220485 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 163, 23 |
| Conread position: | 168-315 |
| Cow position: | chr9:18778817-18778963 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 168-344 |
| Cow position: | chr9:6300820-6300643 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 170 |
| Conread position: | 173-316 |
| Cow position: | chr9:3544765-3544622 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-331 |
| Cow position: | chr9:27784410-27784256 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 91 |
| Conread position: | 183-344 |
| Cow position: | chr9:31066944-31066783 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 154 |
| Conread position: | 196-344 |
| Cow position: | chr9:14002268-14002120 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 141 |
| Conread position: | 200-328 |
| Cow position: | chr9:30437441-30437312 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.