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Cow genome map

           
Conread name:
           
Ss1.1-rfce22c_a4.5
        

               
Conread position:
               
4-366
               

               
Cow position:
               
chr13:311696-311320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr13:20440338-20440636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr13:6835546-6835850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr13:34263118-34263484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
13-435
               

               
Cow position:
               
chr13:9803317-9802877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
15-362
               

               
Cow position:
               
chr13:53566854-53566487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
22-305
               

               
Cow position:
               
chr13:16833840-16834125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr13:46516315-46515943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
22-370
               

               
Cow position:
               
chr13:61976715-61977071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
22-436
               

               
Cow position:
               
chr13:34761909-34761492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
22-438
               

               
Cow position:
               
chr13:22085507-22085944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
22-465
               

               
Cow position:
               
chr13:152192-151729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
22-488
               

               
Cow position:
               
chr13:37946725-37947197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
23-326
               

               
Cow position:
               
chr13:34375504-34375187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
41-499
               

               
Cow position:
               
chr13:17498443-17497966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
44-444
               

               
Cow position:
               
chr13:15446262-15445831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr13:27027556-27027757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 162
               

               
Conread position:
               
48-366
               

               
Cow position:
               
chr13:46112178-46111851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr13:20563209-20562868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
6, 157
               

               
Conread position:
               
49-221
               

               
Cow position:
               
chr13:60393490-60393667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
49-321
               

               
Cow position:
               
chr13:2463019-2463302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
49-366
               

               
Cow position:
               
chr13:57475207-57475524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
49-370
               

               
Cow position:
               
chr13:17800284-17799958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
49-501
               

               
Cow position:
               
chr13:10924697-10925174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
50-188
               

               
Cow position:
               
chr13:60436674-60436818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-192
               

               
Cow position:
               
chr13:17994135-17993993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
50-196
               

               
Cow position:
               
chr13:8195291-8195145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
50-206
               

               
Cow position:
               
chr13:37947802-37947954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
50-210
               

               
Cow position:
               
chr13:33054186-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
50-215
               

               
Cow position:
               
chr13:17815980-17815808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
50-216
               

               
Cow position:
               
chr13:19555961-19555797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
50-216
               

               
Cow position:
               
chr13:38485040-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr13:18551657-18551481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr13:54381725-54381903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr13:21210071-21209887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr13:43629567-43629750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
50-235
               

               
Cow position:
               
chr13:6606812-6607003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr13:48944870-48944689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr13:33875871-33875682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr13:60599733-60599924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 181
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr13:34299432-34299615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
50-245
               

               
Cow position:
               
chr13:60690513-60690717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
50-251
               

               
Cow position:
               
chr13:19426489-19426693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
50-253
               

               
Cow position:
               
chr13:9884977-9884770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr13:21904871-21904664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
96, 151
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr13:37516927-37517136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr13:2339639-2339435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr13:38012570-38012352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr13:54237555-54237352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr13:20536709-20536485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr13:37980438-37980666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
50-277
               

               
Cow position:
               
chr13:6975581-6975817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
50-277
               

               
Cow position:
               
chr13:25248934-25249180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
50-279
               

               
Cow position:
               
chr13:37946007-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
50-279
               

               
Cow position:
               
chr13:51108700-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 193
               

               
Conread position:
               
50-281
               

               
Cow position:
               
chr13:3701642-3701412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr13:13266011-13265777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr13:34052392-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chr13:47313116-47312887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr13:5091452-5091700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr13:20041752-20042002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr13:25261599-25261844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr13:54093949-54093712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr13:1011541-1011295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr13:61170506-61170754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 158
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr13:12682332-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr13:22115913-22115654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr13:30026321-30026069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 155
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr13:54344985-54344729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr13:55295416-55295668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr13:20174948-20174701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr13:24155750-24155482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr13:1780042-1779778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr13:33517715-33517974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr13:48251783-48252023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr13:52879621-52879362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr13:13306315-13306034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 214
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr13:12546696-12546971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 158
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr13:7059684-7059398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr13:17855583-17855308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr13:53195083-53195346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 176
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr13:46324581-46324855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
50-321
               

               
Cow position:
               
chr13:46181998-46181728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:4464216-4463943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:18989914-18989653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:19033755-19033489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 54
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:21039389-21039668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 256
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:25531579-25531859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:31808721-31808452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:45604209-45604485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr13:60341023-60340737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:889970-890241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:5263077-5263353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:8201277-8201555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:12045124-12045410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:17613555-17613268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 185
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:17977538-17977281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
209, 75
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:20605910-20606189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:20649774-20650058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 153
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:24376699-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:25547384-25547654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 72
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:30651384-30651116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:34035577-34035295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:34508085-34507814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 146
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:34941447-34941722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:40652142-40651862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:43868909-43869185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:44626589-44626296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:51014971-51015250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 184
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:52227891-52228172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:54702399-54702114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:58043838-58043556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:60429869-60430150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
141, 149
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:60508907-60509192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:61047415-61047142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr13:61166249-61166522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr13:12614469-12614180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr13:49805184-49804898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr13:26261585-26261870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr13:41918953-41919238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
50-340
               

               
Cow position:
               
chr13:16024798-16024503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
50-343
               

               
Cow position:
               
chr13:11954904-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
50-352
               

               
Cow position:
               
chr13:1042747-1043073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
50-361
               

               
Cow position:
               
chr13:45022999-45023322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:9142493-9142167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:15884804-15885136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:18491803-18491482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:28683568-28683248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:37382019-37381687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:43594906-43595217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:44202198-44201895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr13:60974287-60973965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr13:31814076-31813760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 99
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr13:8362537-8362860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr13:13465581-13465883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:8609338-8609665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:11460834-11460515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:12670236-12670569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:12875776-12876090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 44
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:15192685-15193004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 99
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:16015016-16014693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:18166939-18166614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:23960597-23960920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:24754093-24753769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:25695559-25695885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:34728628-34728956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
58, 261
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:36771216-36771538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:37484061-37484397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:37981543-37981862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:43184664-43184998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:44323111-44322784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:45726089-45725773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr13:52285025-52284698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 162
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr13:18172549-18172215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr13:40943457-40943123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:12202574-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:13089233-13088908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:17439557-17439890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:17970825-17971151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:18835395-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 61
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:23479238-23478908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:34281889-34281557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:35526008-35526317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 61
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:37804088-37803769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr13:52585811-52586159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr13:25927001-25926667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr13:33256705-33256378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr13:8524413-8524748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr13:9246923-9246607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
121, 99
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr13:21235476-21235796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr13:46736410-46736090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:2414235-2413904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 150
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:3315465-3315801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:19882826-19883162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:20666177-20666512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:20820631-20820963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 102
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:27525052-27525386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr13:38277928-38278273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
50-375
               

               
Cow position:
               
chr13:56154952-56155278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr13:11061196-11060857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 178
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr13:34261441-34261101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr13:2774333-2773996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr13:55673996-55674341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
50-387
               

               
Cow position:
               
chr13:48037829-48037484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr13:23856424-23856064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr13:33352158-33352498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr13:35659962-35659614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
50-394
               

               
Cow position:
               
chr13:41806985-41806625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr13:42200828-42200467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr13:7663220-7663577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
50-407
               

               
Cow position:
               
chr13:51821683-51822034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
50-428
               

               
Cow position:
               
chr13:12207252-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
50-428
               

               
Cow position:
               
chr13:23270004-23270395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
50-431
               

               
Cow position:
               
chr13:43194384-43193984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr13:3003656-3003278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr13:12990056-12989653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr13:34995117-34995521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr13:40722501-40722893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr13:6079210-6079613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr13:32017313-32017726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr13:4038089-4037710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr13:9974859-9975280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr13:12283047-12282625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr13:15234121-15233734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
50-438
               

               
Cow position:
               
chr13:20839776-20839368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
50-439
               

               
Cow position:
               
chr13:21155280-21155671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 111
               

               
Conread position:
               
50-443
               

               
Cow position:
               
chr13:60966973-60966562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
50-458
               

               
Cow position:
               
chr13:36877281-36876835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
50-459
               

               
Cow position:
               
chr13:14544331-14543902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
50-461
               

               
Cow position:
               
chr13:6974369-6973943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
50-461
               

               
Cow position:
               
chr13:17821050-17821496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
50-470
               

               
Cow position:
               
chr13:47963992-47964412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
50-472
               

               
Cow position:
               
chr13:14927448-14927017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
50-476
               

               
Cow position:
               
chr13:9587374-9587814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
50-477
               

               
Cow position:
               
chr13:20271006-20271458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 168
               

               
Conread position:
               
50-478
               

               
Cow position:
               
chr13:37069558-37069112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
50-480
               

               
Cow position:
               
chr13:6616539-6616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
50-480
               

               
Cow position:
               
chr13:38283775-38284216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
50-484
               

               
Cow position:
               
chr13:25434920-25435363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
50-485
               

               
Cow position:
               
chr13:20879626-20880066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
50-488
               

               
Cow position:
               
chr13:21276064-21275618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
50-488
               

               
Cow position:
               
chr13:38329839-38329380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
50-489
               

               
Cow position:
               
chr13:17745448-17744993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
50-489
               

               
Cow position:
               
chr13:32283336-32282887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
50-490
               

               
Cow position:
               
chr13:43480270-43479821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
50-493
               

               
Cow position:
               
chr13:45353255-45352784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
50-493
               

               
Cow position:
               
chr13:52894353-52893905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr13:13320985-13320539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr13:17021511-17021990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
50-502
               

               
Cow position:
               
chr13:12448780-12449233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
50-528
               

               
Cow position:
               
chr13:37985541-37986027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
51-250
               

               
Cow position:
               
chr13:20509940-20509736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
51-373
               

               
Cow position:
               
chr13:9593715-9593381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
51-494
               

               
Cow position:
               
chr13:14063316-14063767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
52-278
               

               
Cow position:
               
chr13:20530934-20531172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr13:1231858-1231571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 202
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr13:9643675-9643959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 195
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr13:20679552-20679221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr13:37818550-37818869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr13:62247338-62247019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
52-370
               

               
Cow position:
               
chr13:13501412-13501739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 105
               

               
Conread position:
               
52-444
               

               
Cow position:
               
chr13:20784795-20784376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
53-196
               

               
Cow position:
               
chr13:16292752-16292599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
53-196
               

               
Cow position:
               
chr13:20597573-20597713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
53-235
               

               
Cow position:
               
chr13:34556127-34556316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 183
               

               
Conread position:
               
53-256
               

               
Cow position:
               
chr13:11147512-11147303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
53-279
               

               
Cow position:
               
chr13:39948213-39948441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
53-288
               

               
Cow position:
               
chr13:562932-563176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
53-318
               

               
Cow position:
               
chr13:5278983-5279262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
53-323
               

               
Cow position:
               
chr13:15622013-15621741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr13:11260460-11260161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr13:13176855-13176536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr13:21107330-21107031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr13:15974816-15974499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
93, 196
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr13:19022484-19022149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr13:20705996-20706327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr13:43762371-43762047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
53-370
               

               
Cow position:
               
chr13:46525236-46525548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr13:17114174-17114501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr13:971692-972023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
138, 74
               

               
Conread position:
               
53-375
               

               
Cow position:
               
chr13:4553005-4552691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
53-400
               

               
Cow position:
               
chr13:21287884-21288238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr13:2192914-2192525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 186
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr13:56686633-56686231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
138, 50
               

               
Conread position:
               
53-442
               

               
Cow position:
               
chr13:20378131-20378533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
53-468
               

               
Cow position:
               
chr13:43139019-43139448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
54-242
               

               
Cow position:
               
chr13:15172202-15172397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
54-243
               

               
Cow position:
               
chr13:15740274-15740075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
54-320
               

               
Cow position:
               
chr13:39952207-39952482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr13:19138642-19138368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr13:6060802-6061126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr13:7076461-7076139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr13:23166891-23167219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr13:42114226-42113906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
54-367
               

               
Cow position:
               
chr13:6153574-6153903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr13:51528241-51528560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
54-374
               

               
Cow position:
               
chr13:15041267-15041599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 196
               

               
Conread position:
               
54-374
               

               
Cow position:
               
chr13:24586252-24585921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
54-431
               

               
Cow position:
               
chr13:24369789-24369397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
54-437
               

               
Cow position:
               
chr13:47007531-47007924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
54-444
               

               
Cow position:
               
chr13:21241887-21242294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
54-446
               

               
Cow position:
               
chr13:12925996-12925576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
54-477
               

               
Cow position:
               
chr13:15869324-15868881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
54-484
               

               
Cow position:
               
chr13:15162460-15162870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr13:12574838-12574608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr13:37592734-37593018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 152
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr13:48598108-48597837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
55-349
               

               
Cow position:
               
chr13:18244060-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
55-362
               

               
Cow position:
               
chr13:13765972-13765676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
55-363
               

               
Cow position:
               
chr13:11821346-11821043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
55-373
               

               
Cow position:
               
chr13:17622488-17622163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr13:19223853-19223528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
55-393
               

               
Cow position:
               
chr13:15257174-15257511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
55-406
               

               
Cow position:
               
chr13:32535859-32535493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
55-425
               

               
Cow position:
               
chr13:49848122-49847745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
55-434
               

               
Cow position:
               
chr13:1959213-1958817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
55-435
               

               
Cow position:
               
chr13:10932756-10932364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:661428-661831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:8245128-8245526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:11767838-11768239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:20466088-20466480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:26383027-26383412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr13:54095010-54094615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
55-468
               

               
Cow position:
               
chr13:45073731-45074146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 48
               

               
Conread position:
               
55-469
               

               
Cow position:
               
chr13:12233253-12233675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
56-268
               

               
Cow position:
               
chr13:16247856-16247644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
56-374
               

               
Cow position:
               
chr13:25817716-25817401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
184, 79
               

               
Conread position:
               
56-446
               

               
Cow position:
               
chr13:4664659-4665070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr13:15167025-15166701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
58-295
               

               
Cow position:
               
chr13:19178477-19178232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr13:19364445-19364197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
58-326
               

               
Cow position:
               
chr13:55315988-55316263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
58-350
               

               
Cow position:
               
chr13:11096373-11096080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
58-366
               

               
Cow position:
               
chr13:15281735-15282053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 194
               

               
Conread position:
               
58-366
               

               
Cow position:
               
chr13:56148742-56148403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 197
               

               
Conread position:
               
58-366
               

               
Cow position:
               
chr13:56160225-56160564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 197
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr13:10928789-10929110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
58-380
               

               
Cow position:
               
chr13:26480013-26480336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
58-435
               

               
Cow position:
               
chr13:10845794-10845409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
58-441
               

               
Cow position:
               
chr13:5175771-5175384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
58-515
               

               
Cow position:
               
chr13:13261209-13260741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr13:37521180-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr13:24230413-24230096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
59-374
               

               
Cow position:
               
chr13:48165229-48165552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
59-380
               

               
Cow position:
               
chr13:52749288-52749602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
59-436
               

               
Cow position:
               
chr13:37775027-37775416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
60-242
               

               
Cow position:
               
chr13:5079026-5079210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
60-438
               

               
Cow position:
               
chr13:23512558-23512168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
64-188
               

               
Cow position:
               
chr13:27017191-27017315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-273
               

               
Cow position:
               
chr13:43812279-43812068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
64-273
               

               
Cow position:
               
chr13:43839350-43839561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr13:26847629-26847856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
64-297
               

               
Cow position:
               
chr13:5752228-5752472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
64-319
               

               
Cow position:
               
chr13:5658535-5658791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
64-320
               

               
Cow position:
               
chr13:26369721-26369457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr13:52199284-52198893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr13:58525117-58524730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
64-443
               

               
Cow position:
               
chr13:8652242-8652627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
64-462
               

               
Cow position:
               
chr13:19393482-19393076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
64-481
               

               
Cow position:
               
chr13:24715437-24714994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
64-487
               

               
Cow position:
               
chr13:51940926-51940488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
65-196
               

               
Cow position:
               
chr13:47356821-47356694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
65-370
               

               
Cow position:
               
chr13:23667453-23667131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr13:41253811-41253556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr13:15528835-15529155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
66-425
               

               
Cow position:
               
chr13:57493990-57494372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
68-360
               

               
Cow position:
               
chr13:46458813-46458511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
68-362
               

               
Cow position:
               
chr13:15991031-15991344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
68-395
               

               
Cow position:
               
chr13:21283515-21283852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
69-326
               

               
Cow position:
               
chr13:15958811-15958542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
69-373
               

               
Cow position:
               
chr13:61990144-61990461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
69-378
               

               
Cow position:
               
chr13:15195019-15195333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
69-501
               

               
Cow position:
               
chr13:16343877-16343439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
70-320
               

               
Cow position:
               
chr13:14771650-14771386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
71-223
               

               
Cow position:
               
chr13:22025521-22025678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
72-287
               

               
Cow position:
               
chr13:38033869-38033651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr13:2404930-2404682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
74-256
               

               
Cow position:
               
chr13:53358261-53358069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
74-326
               

               
Cow position:
               
chr13:17338619-17338357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
74-326
               

               
Cow position:
               
chr13:47186409-47186166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
75-438
               

               
Cow position:
               
chr13:6540129-6540513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
76-302
               

               
Cow position:
               
chr13:62474616-62474847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
76-310
               

               
Cow position:
               
chr13:11644116-11643883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
76-370
               

               
Cow position:
               
chr13:5082837-5082529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
76-436
               

               
Cow position:
               
chr13:29831251-29831637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 171
               

               
Conread position:
               
77-299
               

               
Cow position:
               
chr13:23651614-23651392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
77-492
               

               
Cow position:
               
chr13:19188486-19188049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
78-462
               

               
Cow position:
               
chr13:5758164-5758568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
79-320
               

               
Cow position:
               
chr13:52929880-52929645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
79-372
               

               
Cow position:
               
chr13:966257-965976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
82-320
               

               
Cow position:
               
chr13:62601177-62600941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
83-303
               

               
Cow position:
               
chr13:36346147-36345927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
83-517
               

               
Cow position:
               
chr13:49022694-49023135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
85-256
               

               
Cow position:
               
chr13:24776453-24776284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
86-435
               

               
Cow position:
               
chr13:9665239-9664873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 310
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr13:22030254-22030064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
89-295
               

               
Cow position:
               
chr13:7790184-7789967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr13:4420517-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
89-498
               

               
Cow position:
               
chr13:9800669-9800249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
95-366
               

               
Cow position:
               
chr13:39368117-39367841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
96-366
               

               
Cow position:
               
chr13:9900308-9900041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 167
               

               
Conread position:
               
97-439
               

               
Cow position:
               
chr13:49507692-49508044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
98-267
               

               
Cow position:
               
chr13:1339166-1338989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
98-326
               

               
Cow position:
               
chr13:13954232-13954465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
99-302
               

               
Cow position:
               
chr13:37979020-37979211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
102-438
               

               
Cow position:
               
chr13:15903171-15902846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
103-438
               

               
Cow position:
               
chr13:25537784-25537425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
103-500
               

               
Cow position:
               
chr13:18999694-18999273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr13:20853727-20853919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
104-302
               

               
Cow position:
               
chr13:14870681-14870484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
104-312
               

               
Cow position:
               
chr13:607114-607316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr13:13339011-13338787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
104-367
               

               
Cow position:
               
chr13:9265681-9265946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
104-373
               

               
Cow position:
               
chr13:15110471-15110191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
104-374
               

               
Cow position:
               
chr13:20231053-20231316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
104-380
               

               
Cow position:
               
chr13:37640737-37640458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
104-438
               

               
Cow position:
               
chr13:25604475-25604817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
105-321
               

               
Cow position:
               
chr13:20128815-20128599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
106-301
               

               
Cow position:
               
chr13:41154883-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
106-366
               

               
Cow position:
               
chr13:43829401-43829126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
107-306
               

               
Cow position:
               
chr13:53070022-53070216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 92
               

               
Conread position:
               
107-374
               

               
Cow position:
               
chr13:17158727-17159004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
107-380
               

               
Cow position:
               
chr13:49824171-49823895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
107-399
               

               
Cow position:
               
chr13:20580053-20579762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
108-295
               

               
Cow position:
               
chr13:61162796-61162603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
108-297
               

               
Cow position:
               
chr13:16711777-16711585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr13:26743270-26743065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr13:1363841-1363625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr13:10988928-10989139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
108-370
               

               
Cow position:
               
chr13:54583024-54582752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
108-374
               

               
Cow position:
               
chr13:26698350-26698624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
108-438
               

               
Cow position:
               
chr13:20180564-20180221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
108-438
               

               
Cow position:
               
chr13:20473544-20473887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
108-484
               

               
Cow position:
               
chr13:17568952-17569333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr13:25496152-25495936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
109-438
               

               
Cow position:
               
chr13:8374626-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
110-464
               

               
Cow position:
               
chr13:46044299-46043935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 39
               

               
Conread position:
               
110-511
               

               
Cow position:
               
chr13:20360415-20360008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr13:8555606-8555389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
112-370
               

               
Cow position:
               
chr13:11381579-11381845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
113-252
               

               
Cow position:
               
chr13:48372776-48372911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr13:49520680-49520894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr13:21269440-21269648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr13:51115889-51116145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr13:11321477-11321821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr13:10098853-10099039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
120-435
               

               
Cow position:
               
chr13:626694-626381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
121-488
               

               
Cow position:
               
chr13:25579053-25579430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
122-438
               

               
Cow position:
               
chr13:2803601-2803274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 8
               

               
Conread position:
               
125-374
               

               
Cow position:
               
chr13:6389510-6389270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr13:11591875-11591633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
131-326
               

               
Cow position:
               
chr13:50713326-50713138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
132-370
               

               
Cow position:
               
chr13:1569046-1568810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
140-267
               

               
Cow position:
               
chr13:55947889-55947761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr13:20357778-20357942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
140-326
               

               
Cow position:
               
chr13:18995243-18995054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
140-366
               

               
Cow position:
               
chr13:14576321-14576095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
140-438
               

               
Cow position:
               
chr13:15194617-15194933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
145-438
               

               
Cow position:
               
chr13:19240546-19240227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
146-362
               

               
Cow position:
               
chr13:3989313-3989089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
149-438
               

               
Cow position:
               
chr13:49457778-49457490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
152-312
               

               
Cow position:
               
chr13:18929631-18929468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
152-362
               

               
Cow position:
               
chr13:13297777-13297565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
152-477
               

               
Cow position:
               
chr13:620157-620475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
153-475
               

               
Cow position:
               
chr13:7265022-7265355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
154-320
               

               
Cow position:
               
chr13:55728002-55727836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
154-471
               

               
Cow position:
               
chr13:19279194-19278862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr13:56678115-56677828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
158-279
               

               
Cow position:
               
chr13:13809463-13809587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr13:3211642-3211427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
182-362
               

               
Cow position:
               
chr13:827316-827131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
188-309
               

               
Cow position:
               
chr13:8367909-8367789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 6
               

               
Conread position:
               
188-374
               

               
Cow position:
               
chr13:62008178-62007981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
199-446
               

               
Cow position:
               
chr13:18181717-18181971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 185
               

               
Conread position:
               
202-374
               

               
Cow position:
               
chr13:1147098-1147276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
203-361
               

               
Cow position:
               
chr13:17350405-17350242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
203-438
               

               
Cow position:
               
chr13:16020904-16020647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
207-436
               

               
Cow position:
               
chr13:8660095-8659865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
208-358
               

               
Cow position:
               
chr13:60393830-60393674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr13:1242412-1242605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
218-438
               

               
Cow position:
               
chr13:9161958-9161722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
224-457
               

               
Cow position:
               
chr13:8233026-8232787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
227-433
               

               
Cow position:
               
chr13:33974762-33974539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
227-483
               

               
Cow position:
               
chr13:21980947-21981203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
233-425
               

               
Cow position:
               
chr13:52568980-52569185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
235-431
               

               
Cow position:
               
chr13:48439526-48439728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
244-497
               

               
Cow position:
               
chr13:15069969-15069699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
260-453
               

               
Cow position:
               
chr13:45108419-45108627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 196
               
Show alignments to all cow chromosomes.